Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.81□□□□□ -2.86
SSX9Q7RTT3 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.81□□□□□ -2.86
SSX9Q7RTT3 RNU6-258P-201ENST00000390884 101 ntBASIC-2.81□□□□□ -2.86
SSX9Q7RTT3 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.82□□□□□ -2.86
SSX9Q7RTT3 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.82□□□□□ -2.86
SSX9Q7RTT3 RNU6-766P-201ENST00000362478 107 ntBASIC-2.83□□□□□ -2.86
SSX9Q7RTT3 RNU6-563P-201ENST00000364872 108 ntBASIC-2.83□□□□□ -2.86
SSX9Q7RTT3 MT-TM-201ENST00000387377 68 ntBASIC-2.83□□□□□ -2.86
SSX9Q7RTT3 RNU6-557P-201ENST00000516842 110 ntBASIC-2.83□□□□□ -2.86
SSX9Q7RTT3 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.83□□□□□ -2.86
SSX9Q7RTT3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.83□□□□□ -2.86
SSX9Q7RTT3 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.84□□□□□ -2.86
SSX9Q7RTT3 RNU6-686P-201ENST00000364839 107 ntBASIC-2.85□□□□□ -2.87
SSX9Q7RTT3 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.85□□□□□ -2.87
SSX9Q7RTT3 AC074348.1-201ENST00000426503 132 ntBASIC-2.85□□□□□ -2.87
SSX9Q7RTT3 MTND4LP1-201ENST00000446263 157 ntBASIC-2.85□□□□□ -2.87
SSX9Q7RTT3 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.86□□□□□ -2.87
SSX9Q7RTT3 MIR630-201ENST00000384957 97 ntBASIC-2.86□□□□□ -2.87
SSX9Q7RTT3 MIR466-201ENST00000580653 84 ntBASIC-2.86□□□□□ -2.87
SSX9Q7RTT3 MIR2052-201ENST00000636055 55 ntBASIC-2.86□□□□□ -2.87
SSX9Q7RTT3 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.87□□□□□ -2.87
SSX9Q7RTT3 SNORD116-22-201ENST00000384430 92 ntBASIC-2.87□□□□□ -2.87
SSX9Q7RTT3 MIR3170-201ENST00000582699 77 ntBASIC-2.87□□□□□ -2.87
SSX9Q7RTT3 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.87□□□□□ -2.87
SSX9Q7RTT3 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.88□□□□□ -2.87
SSX9Q7RTT3 MIR548AA1-201ENST00000384971 97 ntBASIC-2.88□□□□□ -2.87
SSX9Q7RTT3 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.89□□□□□ -2.87
SSX9Q7RTT3 RNU6-247P-201ENST00000362636 107 ntBASIC-2.9□□□□□ -2.87
SSX9Q7RTT3 SNORD113-2-201ENST00000391082 72 ntBASIC-2.91□□□□□ -2.88
SSX9Q7RTT3 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.91□□□□□ -2.88
SSX9Q7RTT3 MIR548BB-201ENST00000626714 66 ntBASIC-2.91□□□□□ -2.88
SSX9Q7RTT3 RNA5SP215-201ENST00000363440 122 ntBASIC-2.92□□□□□ -2.88
SSX9Q7RTT3 RNU6-668P-201ENST00000364180 107 ntBASIC-2.92□□□□□ -2.88
SSX9Q7RTT3 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.93□□□□□ -2.88
SSX9Q7RTT3 SNORD116-16-201ENST00000384533 92 ntBASIC-2.93□□□□□ -2.88
SSX9Q7RTT3 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.93□□□□□ -2.88
SSX9Q7RTT3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.93□□□□□ -2.88
SSX9Q7RTT3 MIR4748-201ENST00000578076 82 ntBASIC-2.93□□□□□ -2.88
SSX9Q7RTT3 MIR4484-201ENST00000582855 83 ntBASIC-2.93□□□□□ -2.88
SSX9Q7RTT3 RNU6-219P-201ENST00000364728 107 ntBASIC-2.94□□□□□ -2.88
SSX9Q7RTT3 RNU6-267P-201ENST00000516714 103 ntBASIC-2.94□□□□□ -2.88
SSX9Q7RTT3 RNU6-129P-201ENST00000391022 107 ntBASIC-2.95□□□□□ -2.88
SSX9Q7RTT3 RNU6-402P-201ENST00000410678 103 ntBASIC-2.95□□□□□ -2.88
SSX9Q7RTT3 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.95□□□□□ -2.88
SSX9Q7RTT3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.96□□□□□ -2.88
SSX9Q7RTT3 AC008267.6-201ENST00000441664 139 ntBASIC-2.96□□□□□ -2.88
SSX9Q7RTT3 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.96□□□□□ -2.88
SSX9Q7RTT3 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.97□□□□□ -2.88
SSX9Q7RTT3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.97□□□□□ -2.88
SSX9Q7RTT3 MIR1297-201ENST00000637311 77 ntBASIC-2.97□□□□□ -2.88
SSX9Q7RTT3 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.98□□□□□ -2.89
SSX9Q7RTT3 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.98□□□□□ -2.89
SSX9Q7RTT3 RNU6-589P-201ENST00000516485 107 ntBASIC-2.98□□□□□ -2.89
SSX9Q7RTT3 MIR548W-201ENST00000581970 74 ntBASIC-2.98□□□□□ -2.89
SSX9Q7RTT3 MIR8053-201ENST00000613344 75 ntBASIC-2.98□□□□□ -2.89
SSX9Q7RTT3 AC099654.10-201ENST00000640395 161 ntBASIC-2.98□□□□□ -2.89
SSX9Q7RTT3 RNA5SP173-201ENST00000364857 136 ntBASIC-2.99□□□□□ -2.89
SSX9Q7RTT3 RNU6-497P-201ENST00000365316 104 ntBASIC-2.99□□□□□ -2.89
SSX9Q7RTT3 RNU6-959P-201ENST00000384671 107 ntBASIC-2.99□□□□□ -2.89
SSX9Q7RTT3 RNY4-201ENST00000516507 96 ntBASIC-2.99□□□□□ -2.89
SSX9Q7RTT3 SNORD113.1-201ENST00000363280 73 ntBASIC-3□□□□□ -2.89
SSX9Q7RTT3 SNORD115-31-201ENST00000365318 82 ntBASIC-3□□□□□ -2.89
SSX9Q7RTT3 RNU6-995P-201ENST00000391244 107 ntBASIC-3□□□□□ -2.89
SSX9Q7RTT3 snoU13.10-201ENST00000459301 103 ntBASIC-3□□□□□ -2.89
SSX9Q7RTT3 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.01□□□□□ -2.89
SSX9Q7RTT3 RNU6-380P-201ENST00000410207 107 ntBASIC-3.01□□□□□ -2.89
SSX9Q7RTT3 AL031737.1-201ENST00000450125 223 ntBASIC-3.01□□□□□ -2.89
SSX9Q7RTT3 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.01□□□□□ -2.89
SSX9Q7RTT3 AC090425.1-201ENST00000610007 140 ntBASIC-3.01□□□□□ -2.89
SSX9Q7RTT3 SNORD1B-201ENST00000363091 84 ntBASIC-3.02□□□□□ -2.89
SSX9Q7RTT3 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.02□□□□□ -2.89
SSX9Q7RTT3 SNORA41B-201ENST00000384785 128 ntBASIC-3.02□□□□□ -2.89
SSX9Q7RTT3 RNY4P18-201ENST00000391107 89 ntBASIC-3.02□□□□□ -2.89
SSX9Q7RTT3 Y_RNA.703-201ENST00000516846 111 ntBASIC-3.02□□□□□ -2.89
SSX9Q7RTT3 MIR3133-201ENST00000583157 78 ntBASIC-3.02□□□□□ -2.89
SSX9Q7RTT3 MALAT1.1-201ENST00000618249 95 ntBASIC-3.02□□□□□ -2.89
SSX9Q7RTT3 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.03□□□□□ -2.89
SSX9Q7RTT3 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.03□□□□□ -2.89
SSX9Q7RTT3 FTX_4.1-201ENST00000616291 147 ntBASIC-3.03□□□□□ -2.89
SSX9Q7RTT3 MIR450A1-201ENST00000362262 91 ntBASIC-3.04□□□□□ -2.9
SSX9Q7RTT3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.05□□□□□ -2.9
SSX9Q7RTT3 AL365222.1-201ENST00000614661 98 ntBASIC-3.05□□□□□ -2.9
SSX9Q7RTT3 SNORD45A-201ENST00000384512 84 ntBASIC-3.06□□□□□ -2.9
SSX9Q7RTT3 MIR4719-201ENST00000585233 84 ntBASIC-3.06□□□□□ -2.9
SSX9Q7RTT3 SNORA40.13-201ENST00000516379 120 ntBASIC-3.07□□□□□ -2.9
SSX9Q7RTT3 RNU7-151P-201ENST00000516930 53 ntBASIC-3.07□□□□□ -2.9
SSX9Q7RTT3 AP001318.4-201ENST00000616637 121 ntBASIC-3.08□□□□□ -2.9
SSX9Q7RTT3 AC013734.1-201ENST00000619329 111 ntBASIC-3.08□□□□□ -2.9
SSX9Q7RTT3 AC006160.2-201ENST00000637708 154 ntBASIC-3.08□□□□□ -2.9
SSX9Q7RTT3 SNORA63.4-201ENST00000362763 126 ntBASIC-3.09□□□□□ -2.9
SSX9Q7RTT3 SNORD63.2-201ENST00000516303 64 ntBASIC-3.09□□□□□ -2.9
SSX9Q7RTT3 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.09□□□□□ -2.9
SSX9Q7RTT3 SNORA27.2-201ENST00000363365 126 ntBASIC-3.1□□□□□ -2.91
SSX9Q7RTT3 RNU6-755P-201ENST00000364400 103 ntBASIC-3.1□□□□□ -2.91
SSX9Q7RTT3 Y_RNA.709-201ENST00000516952 92 ntBASIC-3.1□□□□□ -2.91
SSX9Q7RTT3 RNU6-834P-201ENST00000362367 110 ntBASIC-3.11□□□□□ -2.91
SSX9Q7RTT3 RNY4P9-201ENST00000363194 97 ntBASIC-3.11□□□□□ -2.91
SSX9Q7RTT3 MIR579-201ENST00000385221 98 ntBASIC-3.11□□□□□ -2.91
SSX9Q7RTT3 AC097484.2-201ENST00000509147 251 ntBASIC-3.11□□□□□ -2.91
SSX9Q7RTT3 MIR664A-201ENST00000626086 82 ntBASIC-3.12□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms