Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 SNORD1B-201ENST00000363091 84 ntBASIC-3.24□□□□□ -2.93
USP54Q70EL1 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.24□□□□□ -2.93
USP54Q70EL1 RNU6-755P-201ENST00000364400 103 ntBASIC-3.25□□□□□ -2.93
USP54Q70EL1 RNA5SP173-201ENST00000364857 136 ntBASIC-3.25□□□□□ -2.93
USP54Q70EL1 RNU6-904P-201ENST00000516206 101 ntBASIC-3.25□□□□□ -2.93
USP54Q70EL1 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.25□□□□□ -2.93
USP54Q70EL1 RNU6-330P-201ENST00000363015 107 ntBASIC-3.26□□□□□ -2.93
USP54Q70EL1 MIR579-201ENST00000385221 98 ntBASIC-3.26□□□□□ -2.93
USP54Q70EL1 RNU7-120P-201ENST00000459334 63 ntBASIC-3.26□□□□□ -2.93
USP54Q70EL1 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.27□□□□□ -2.93
USP54Q70EL1 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.27□□□□□ -2.93
USP54Q70EL1 RNU6-974P-201ENST00000384099 108 ntBASIC-3.27□□□□□ -2.93
USP54Q70EL1 MIR548N-201ENST00000408742 75 ntBASIC-3.27□□□□□ -2.93
USP54Q70EL1 MIR581-201ENST00000384895 96 ntBASIC-3.28□□□□□ -2.93
USP54Q70EL1 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.28□□□□□ -2.93
USP54Q70EL1 AC093729.1-201ENST00000513074 128 ntBASIC-3.28□□□□□ -2.93
USP54Q70EL1 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.28□□□□□ -2.93
USP54Q70EL1 RNU6-633P-201ENST00000362612 103 ntBASIC-3.29□□□□□ -2.94
USP54Q70EL1 SNORD113.1-201ENST00000363280 73 ntBASIC-3.29□□□□□ -2.94
USP54Q70EL1 RNU6-520P-201ENST00000384717 104 ntBASIC-3.29□□□□□ -2.94
USP54Q70EL1 U7.3-201ENST00000616123 62 ntBASIC-3.29□□□□□ -2.94
USP54Q70EL1 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.3□□□□□ -2.94
USP54Q70EL1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.3□□□□□ -2.94
USP54Q70EL1 AC074348.1-201ENST00000426503 132 ntBASIC-3.3□□□□□ -2.94
USP54Q70EL1 MTND4LP9-201ENST00000427694 174 ntBASIC-3.3□□□□□ -2.94
USP54Q70EL1 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.31□□□□□ -2.94
USP54Q70EL1 SNORD116-18-201ENST00000383961 92 ntBASIC-3.31□□□□□ -2.94
USP54Q70EL1 MIR548F4-201ENST00000408515 105 ntBASIC-3.31□□□□□ -2.94
USP54Q70EL1 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.32□□□□□ -2.94
USP54Q70EL1 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.32□□□□□ -2.94
USP54Q70EL1 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.32□□□□□ -2.94
USP54Q70EL1 RNU6-604P-201ENST00000390917 100 ntBASIC-3.32□□□□□ -2.94
USP54Q70EL1 SNORA17.4-201ENST00000391287 132 ntBASIC-3.32□□□□□ -2.94
USP54Q70EL1 AL117187.1-201ENST00000555482 181 ntBASIC-3.32□□□□□ -2.94
USP54Q70EL1 RNU6-361P-201ENST00000364454 107 ntBASIC-3.33□□□□□ -2.94
USP54Q70EL1 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.33□□□□□ -2.94
USP54Q70EL1 MIR569-201ENST00000385228 96 ntBASIC-3.33□□□□□ -2.94
USP54Q70EL1 RNU6-162P-201ENST00000516228 103 ntBASIC-3.33□□□□□ -2.94
USP54Q70EL1 RNU6-649P-201ENST00000384463 107 ntBASIC-3.33□□□□□ -2.94
USP54Q70EL1 RNU6-172P-201ENST00000411000 93 ntBASIC-3.34□□□□□ -2.94
USP54Q70EL1 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.34□□□□□ -2.94
USP54Q70EL1 RNU6-557P-201ENST00000516842 110 ntBASIC-3.34□□□□□ -2.94
USP54Q70EL1 AC044792.1-201ENST00000593294 196 ntBASIC-3.34□□□□□ -2.94
USP54Q70EL1 RNU6-912P-201ENST00000363800 104 ntBASIC-3.35□□□□□ -2.95
USP54Q70EL1 SNORA40-201ENST00000388090 126 ntBASIC-3.35□□□□□ -2.95
USP54Q70EL1 AP001318.4-201ENST00000616637 121 ntBASIC-3.35□□□□□ -2.95
USP54Q70EL1 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.36□□□□□ -2.95
USP54Q70EL1 RNU6-426P-201ENST00000516464 97 ntBASIC-3.36□□□□□ -2.95
USP54Q70EL1 AC008737.2-201ENST00000599446 118 ntBASIC-3.36□□□□□ -2.95
USP54Q70EL1 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.36□□□□□ -2.95
USP54Q70EL1 MIR125B1-201ENST00000385236 88 ntBASIC-3.36□□□□□ -2.95
USP54Q70EL1 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.37□□□□□ -2.95
USP54Q70EL1 RNU6-828P-201ENST00000364876 107 ntBASIC-3.38□□□□□ -2.95
USP54Q70EL1 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.38□□□□□ -2.95
USP54Q70EL1 MIR590-201ENST00000385008 97 ntBASIC-3.38□□□□□ -2.95
USP54Q70EL1 RNU7-160P-201ENST00000516660 62 ntBASIC-3.38□□□□□ -2.95
USP54Q70EL1 MIR3914-2-201ENST00000637339 95 ntBASIC-3.38□□□□□ -2.95
USP54Q70EL1 MIR1302-3-201ENST00000408128 138 ntBASIC-3.39□□□□□ -2.95
USP54Q70EL1 MIR202-201ENST00000362219 110 ntBASIC-3.39□□□□□ -2.95
USP54Q70EL1 SNORD45.2-201ENST00000363552 72 ntBASIC-3.39□□□□□ -2.95
USP54Q70EL1 RNU6-686P-201ENST00000364839 107 ntBASIC-3.39□□□□□ -2.95
USP54Q70EL1 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.39□□□□□ -2.95
USP54Q70EL1 MTCYBP6-201ENST00000441810 138 ntBASIC-3.39□□□□□ -2.95
USP54Q70EL1 RNU7-107P-201ENST00000459121 61 ntBASIC-3.39□□□□□ -2.95
USP54Q70EL1 MIR548S-201ENST00000581352 82 ntBASIC-3.39□□□□□ -2.95
USP54Q70EL1 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.39□□□□□ -2.95
USP54Q70EL1 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.4□□□□□ -2.95
USP54Q70EL1 SNORD116-22-201ENST00000384430 92 ntBASIC-3.4□□□□□ -2.95
USP54Q70EL1 RNU6-402P-201ENST00000410678 103 ntBASIC-3.41□□□□□ -2.96
USP54Q70EL1 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.41□□□□□ -2.96
USP54Q70EL1 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.41□□□□□ -2.96
USP54Q70EL1 MIR1302-5-201ENST00000408164 150 ntBASIC-3.42□□□□□ -2.96
USP54Q70EL1 RNU6-380P-201ENST00000410207 107 ntBASIC-3.42□□□□□ -2.96
USP54Q70EL1 SNORD113-3-201ENST00000364830 72 ntBASIC-3.43□□□□□ -2.96
USP54Q70EL1 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.43□□□□□ -2.96
USP54Q70EL1 RNU6-176P-201ENST00000517196 105 ntBASIC-3.43□□□□□ -2.96
USP54Q70EL1 RNU6-659P-201ENST00000516454 104 ntBASIC-3.43□□□□□ -2.96
USP54Q70EL1 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.44□□□□□ -2.96
USP54Q70EL1 MTATP8P2-201ENST00000435212 202 ntBASIC-3.44□□□□□ -2.96
USP54Q70EL1 AL731768.1-201ENST00000603124 139 ntBASIC-3.44□□□□□ -2.96
USP54Q70EL1 U6.95-201ENST00000636931 70 ntBASIC-3.44□□□□□ -2.96
USP54Q70EL1 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.45□□□□□ -2.96
USP54Q70EL1 RNU6-106P-201ENST00000384405 107 ntBASIC-3.45□□□□□ -2.96
USP54Q70EL1 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.45□□□□□ -2.96
USP54Q70EL1 MIR4668-201ENST00000582284 70 ntBASIC-3.45□□□□□ -2.96
USP54Q70EL1 RNU6-834P-201ENST00000362367 110 ntBASIC-3.46□□□□□ -2.96
USP54Q70EL1 SNORD114-13-201ENST00000364377 74 ntBASIC-3.46□□□□□ -2.96
USP54Q70EL1 MIR2052-201ENST00000636055 55 ntBASIC-3.46□□□□□ -2.96
USP54Q70EL1 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.46□□□□□ -2.96
USP54Q70EL1 SNORD33.1-201ENST00000516213 88 ntBASIC-3.46□□□□□ -2.96
USP54Q70EL1 RNU6-542P-201ENST00000516405 103 ntBASIC-3.46□□□□□ -2.96
USP54Q70EL1 AC004792.1-201ENST00000614523 137 ntBASIC-3.46□□□□□ -2.96
USP54Q70EL1 RNU6-804P-201ENST00000384286 107 ntBASIC-3.47□□□□□ -2.97
USP54Q70EL1 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.48□□□□□ -2.97
USP54Q70EL1 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.48□□□□□ -2.97
USP54Q70EL1 SNORD116-21-201ENST00000384507 92 ntBASIC-3.49□□□□□ -2.97
USP54Q70EL1 MIR568-201ENST00000385036 95 ntBASIC-3.49□□□□□ -2.97
USP54Q70EL1 MIR606-201ENST00000384851 96 ntBASIC-3.49□□□□□ -2.97
USP54Q70EL1 MTCYBP9-201ENST00000431021 303 ntBASIC-3.49□□□□□ -2.97
USP54Q70EL1 RNU6-971P-201ENST00000516920 106 ntBASIC-3.49□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 242.4 ms