Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.26□□□□□ -2.77
CSPG4Q6UVK1 RNU6-772P-201ENST00000516042 105 ntBASIC-2.26□□□□□ -2.77
CSPG4Q6UVK1 RNU6-822P-201ENST00000362707 106 ntBASIC-2.26□□□□□ -2.77
CSPG4Q6UVK1 RNU6-915P-201ENST00000364943 103 ntBASIC-2.26□□□□□ -2.77
CSPG4Q6UVK1 RNA5SP224-201ENST00000365069 126 ntBASIC-2.26□□□□□ -2.77
CSPG4Q6UVK1 RNU6-665P-201ENST00000384639 107 ntBASIC-2.26□□□□□ -2.77
CSPG4Q6UVK1 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.26□□□□□ -2.77
CSPG4Q6UVK1 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.26□□□□□ -2.77
CSPG4Q6UVK1 AC072026.1-201ENST00000605023 201 ntBASIC-2.26□□□□□ -2.77
CSPG4Q6UVK1 RNU6-713P-201ENST00000384761 107 ntBASIC-2.28□□□□□ -2.77
CSPG4Q6UVK1 U6.104-201ENST00000637979 90 ntBASIC-2.28□□□□□ -2.77
CSPG4Q6UVK1 RNU4-40P-201ENST00000364351 143 ntBASIC-2.28□□□□□ -2.77
CSPG4Q6UVK1 RNU6-574P-201ENST00000384265 107 ntBASIC-2.28□□□□□ -2.77
CSPG4Q6UVK1 RNY4P13-201ENST00000384284 96 ntBASIC-2.28□□□□□ -2.77
CSPG4Q6UVK1 MT-TL1-201ENST00000386347 75 ntBASIC-2.28□□□□□ -2.77
CSPG4Q6UVK1 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.28□□□□□ -2.77
CSPG4Q6UVK1 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.29□□□□□ -2.78
CSPG4Q6UVK1 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.29□□□□□ -2.78
CSPG4Q6UVK1 RNU6-557P-201ENST00000516842 110 ntBASIC-2.29□□□□□ -2.78
CSPG4Q6UVK1 RNU6-810P-201ENST00000364001 107 ntBASIC-2.29□□□□□ -2.78
CSPG4Q6UVK1 SNORD42.2-201ENST00000365570 69 ntBASIC-2.29□□□□□ -2.78
CSPG4Q6UVK1 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.3□□□□□ -2.78
CSPG4Q6UVK1 MTND3P3-201ENST00000505004 126 ntBASIC-2.3□□□□□ -2.78
CSPG4Q6UVK1 MIR664A-201ENST00000626086 82 ntBASIC-2.3□□□□□ -2.78
CSPG4Q6UVK1 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.31□□□□□ -2.78
CSPG4Q6UVK1 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.31□□□□□ -2.78
CSPG4Q6UVK1 SNORA40.16-201ENST00000517238 121 ntBASIC-2.31□□□□□ -2.78
CSPG4Q6UVK1 MIR4668-201ENST00000582284 70 ntBASIC-2.31□□□□□ -2.78
CSPG4Q6UVK1 AL359920.1-201ENST00000618332 176 ntBASIC-2.31□□□□□ -2.78
CSPG4Q6UVK1 RNU6-686P-201ENST00000364839 107 ntBASIC-2.31□□□□□ -2.78
CSPG4Q6UVK1 RNU6-737P-201ENST00000365370 107 ntBASIC-2.31□□□□□ -2.78
CSPG4Q6UVK1 MIR4680-201ENST00000580906 66 ntBASIC-2.31□□□□□ -2.78
CSPG4Q6UVK1 AC006160.2-201ENST00000637708 154 ntBASIC-2.31□□□□□ -2.78
CSPG4Q6UVK1 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.32□□□□□ -2.78
CSPG4Q6UVK1 U7.3-201ENST00000616123 62 ntBASIC-2.32□□□□□ -2.78
CSPG4Q6UVK1 AP001318.4-201ENST00000616637 121 ntBASIC-2.32□□□□□ -2.78
CSPG4Q6UVK1 RNY3P1-201ENST00000365085 102 ntBASIC-2.33□□□□□ -2.78
CSPG4Q6UVK1 MIR154-201ENST00000385243 84 ntBASIC-2.33□□□□□ -2.78
CSPG4Q6UVK1 SNORD33.1-201ENST00000516213 88 ntBASIC-2.33□□□□□ -2.78
CSPG4Q6UVK1 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.33□□□□□ -2.78
CSPG4Q6UVK1 RNU6-633P-201ENST00000362612 103 ntBASIC-2.34□□□□□ -2.78
CSPG4Q6UVK1 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.34□□□□□ -2.78
CSPG4Q6UVK1 RNU6-402P-201ENST00000410678 103 ntBASIC-2.34□□□□□ -2.78
CSPG4Q6UVK1 MTATP8P2-201ENST00000435212 202 ntBASIC-2.34□□□□□ -2.78
CSPG4Q6UVK1 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.34□□□□□ -2.78
CSPG4Q6UVK1 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.34□□□□□ -2.78
CSPG4Q6UVK1 MIR8062-201ENST00000621515 85 ntBASIC-2.34□□□□□ -2.78
CSPG4Q6UVK1 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.34□□□□□ -2.78
CSPG4Q6UVK1 SNORA19-201ENST00000384737 128 ntBASIC-2.34□□□□□ -2.78
CSPG4Q6UVK1 RNU6-985P-201ENST00000410182 104 ntBASIC-2.34□□□□□ -2.78
CSPG4Q6UVK1 RNU6-789P-201ENST00000517105 102 ntBASIC-2.34□□□□□ -2.78
CSPG4Q6UVK1 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.35□□□□□ -2.79
CSPG4Q6UVK1 SNORD115-45-201ENST00000391078 81 ntBASIC-2.35□□□□□ -2.79
CSPG4Q6UVK1 AC062037.1-201ENST00000605302 128 ntBASIC-2.35□□□□□ -2.79
CSPG4Q6UVK1 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.35□□□□□ -2.79
CSPG4Q6UVK1 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.35□□□□□ -2.79
CSPG4Q6UVK1 AL158147.1-201ENST00000443970 75 ntBASIC-2.35□□□□□ -2.79
CSPG4Q6UVK1 RNU6-162P-201ENST00000516228 103 ntBASIC-2.35□□□□□ -2.79
CSPG4Q6UVK1 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.35□□□□□ -2.79
CSPG4Q6UVK1 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.35□□□□□ -2.79
CSPG4Q6UVK1 RNU6-635P-201ENST00000516651 102 ntBASIC-2.35□□□□□ -2.79
CSPG4Q6UVK1 RNU6-1137P-201ENST00000517073 99 ntBASIC-2.35□□□□□ -2.79
CSPG4Q6UVK1 MIR2052-201ENST00000636055 55 ntBASIC-2.35□□□□□ -2.79
CSPG4Q6UVK1 SNORA63-201ENST00000363450 132 ntBASIC-2.36□□□□□ -2.79
CSPG4Q6UVK1 AC022559.1-201ENST00000520905 205 ntBASIC-2.36□□□□□ -2.79
CSPG4Q6UVK1 MIR548AI-201ENST00000579940 88 ntBASIC-2.36□□□□□ -2.79
CSPG4Q6UVK1 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.37□□□□□ -2.79
CSPG4Q6UVK1 RNU6-1020P-201ENST00000363684 107 ntBASIC-2.37□□□□□ -2.79
CSPG4Q6UVK1 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.37□□□□□ -2.79
CSPG4Q6UVK1 Y_RNA.431-201ENST00000384086 102 ntBASIC-2.37□□□□□ -2.79
CSPG4Q6UVK1 RNU6-940P-201ENST00000363433 104 ntBASIC-2.38□□□□□ -2.79
CSPG4Q6UVK1 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.38□□□□□ -2.79
CSPG4Q6UVK1 MIR124-1-201ENST00000385275 85 ntBASIC-2.39□□□□□ -2.79
CSPG4Q6UVK1 MIR548F1-201ENST00000408667 84 ntBASIC-2.39□□□□□ -2.79
CSPG4Q6UVK1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-2.39□□□□□ -2.79
CSPG4Q6UVK1 MIR4317-201ENST00000637586 65 ntBASIC-2.39□□□□□ -2.79
CSPG4Q6UVK1 RNU6-742P-201ENST00000365289 107 ntBASIC-2.39□□□□□ -2.79
CSPG4Q6UVK1 MIR656-201ENST00000385224 78 ntBASIC-2.39□□□□□ -2.79
CSPG4Q6UVK1 AC134503.1-201ENST00000633048 54 ntBASIC-2.39□□□□□ -2.79
CSPG4Q6UVK1 RNU6-854P-201ENST00000364036 107 ntBASIC-2.4□□□□□ -2.79
CSPG4Q6UVK1 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.4□□□□□ -2.79
CSPG4Q6UVK1 RNU6-876P-201ENST00000391295 104 ntBASIC-2.4□□□□□ -2.79
CSPG4Q6UVK1 SNORA25.5-201ENST00000363782 126 ntBASIC-2.41□□□□□ -2.79
CSPG4Q6UVK1 RNU7-119P-201ENST00000459279 63 ntBASIC-2.41□□□□□ -2.79
CSPG4Q6UVK1 RNU6-70P-201ENST00000516438 60 ntBASIC-2.41□□□□□ -2.79
CSPG4Q6UVK1 SNORA33.2-201ENST00000365413 134 ntBASIC-2.41□□□□□ -2.8
CSPG4Q6UVK1 AC093729.1-201ENST00000513074 128 ntBASIC-2.41□□□□□ -2.8
CSPG4Q6UVK1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.41□□□□□ -2.8
CSPG4Q6UVK1 RNU7-107P-201ENST00000459121 61 ntBASIC-2.42□□□□□ -2.8
CSPG4Q6UVK1 MIR1302-1-201ENST00000637932 143 ntBASIC-2.42□□□□□ -2.8
CSPG4Q6UVK1 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.42□□□□□ -2.8
CSPG4Q6UVK1 RNU6-867P-201ENST00000364956 107 ntBASIC-2.42□□□□□ -2.8
CSPG4Q6UVK1 SNORD116-18-201ENST00000383961 92 ntBASIC-2.42□□□□□ -2.8
CSPG4Q6UVK1 SNORD116-22-201ENST00000384430 92 ntBASIC-2.42□□□□□ -2.8
CSPG4Q6UVK1 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.42□□□□□ -2.8
CSPG4Q6UVK1 MIR548X2-201ENST00000579776 100 ntBASIC-2.42□□□□□ -2.8
CSPG4Q6UVK1 AC141273.2-201ENST00000618989 130 ntBASIC-2.42□□□□□ -2.8
CSPG4Q6UVK1 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.43□□□□□ -2.8
CSPG4Q6UVK1 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.43□□□□□ -2.8
CSPG4Q6UVK1 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.43□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms