Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.83□□□□□ -2.7
VSX2P58304 SNORD116-22-201ENST00000384430 92 ntBASIC-1.83□□□□□ -2.7
VSX2P58304 AC074348.1-201ENST00000426503 132 ntBASIC-1.83□□□□□ -2.7
VSX2P58304 RNU6-557P-201ENST00000516842 110 ntBASIC-1.83□□□□□ -2.7
VSX2P58304 MIR3123-201ENST00000583417 75 ntBASIC-1.83□□□□□ -2.7
VSX2P58304 MIR548AM-201ENST00000584298 74 ntBASIC-1.83□□□□□ -2.7
VSX2P58304 RNA5SP405-201ENST00000363059 114 ntBASIC-1.84□□□□□ -2.7
VSX2P58304 SNORA8.1-201ENST00000384250 140 ntBASIC-1.84□□□□□ -2.7
VSX2P58304 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.84□□□□□ -2.7
VSX2P58304 RNU6-696P-201ENST00000390834 107 ntBASIC-1.84□□□□□ -2.7
VSX2P58304 RNU6-630P-201ENST00000391258 106 ntBASIC-1.84□□□□□ -2.7
VSX2P58304 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.84□□□□□ -2.7
VSX2P58304 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.84□□□□□ -2.7
VSX2P58304 MIR2052-201ENST00000636055 55 ntBASIC-1.84□□□□□ -2.7
VSX2P58304 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.84□□□□□ -2.7
VSX2P58304 U4.4-201ENST00000620626 117 ntBASIC-1.85□□□□□ -2.71
VSX2P58304 RNU6-598P-201ENST00000364017 105 ntBASIC-1.86□□□□□ -2.71
VSX2P58304 RNU6-686P-201ENST00000364839 107 ntBASIC-1.86□□□□□ -2.71
VSX2P58304 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.86□□□□□ -2.71
VSX2P58304 MT-TM-201ENST00000387377 68 ntBASIC-1.86□□□□□ -2.71
VSX2P58304 AP001318.4-201ENST00000616637 121 ntBASIC-1.86□□□□□ -2.71
VSX2P58304 MALAT1.1-201ENST00000618249 95 ntBASIC-1.86□□□□□ -2.71
VSX2P58304 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.87□□□□□ -2.71
VSX2P58304 AL031737.1-201ENST00000450125 223 ntBASIC-1.87□□□□□ -2.71
VSX2P58304 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.88□□□□□ -2.71
VSX2P58304 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.88□□□□□ -2.71
VSX2P58304 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.88□□□□□ -2.71
VSX2P58304 RNU6-834P-201ENST00000362367 110 ntBASIC-1.89□□□□□ -2.71
VSX2P58304 AC120024.2-201ENST00000576526 175 ntBASIC-1.89□□□□□ -2.71
VSX2P58304 MIR4484-201ENST00000582855 83 ntBASIC-1.89□□□□□ -2.71
VSX2P58304 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.89□□□□□ -2.71
VSX2P58304 RNU6-698P-201ENST00000363523 107 ntBASIC-1.9□□□□□ -2.71
VSX2P58304 RNU6-194P-201ENST00000363862 105 ntBASIC-1.9□□□□□ -2.71
VSX2P58304 RNU6-563P-201ENST00000364872 108 ntBASIC-1.9□□□□□ -2.71
VSX2P58304 RNU6-34P-201ENST00000364874 107 ntBASIC-1.9□□□□□ -2.71
VSX2P58304 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.9□□□□□ -2.71
VSX2P58304 RNU6-22P-201ENST00000384355 107 ntBASIC-1.91□□□□□ -2.72
VSX2P58304 MIR548V-201ENST00000584165 80 ntBASIC-1.91□□□□□ -2.72
VSX2P58304 MIR630-201ENST00000384957 97 ntBASIC-1.92□□□□□ -2.72
VSX2P58304 RNU6-129P-201ENST00000391022 107 ntBASIC-1.92□□□□□ -2.72
VSX2P58304 RNU4-88P-201ENST00000411220 86 ntBASIC-1.92□□□□□ -2.72
VSX2P58304 SNORA40.13-201ENST00000516379 120 ntBASIC-1.92□□□□□ -2.72
VSX2P58304 U2.18-201ENST00000622185 84 ntBASIC-1.92□□□□□ -2.72
VSX2P58304 MIR488-201ENST00000365739 83 ntBASIC-1.93□□□□□ -2.72
VSX2P58304 RNY4P18-201ENST00000391107 89 ntBASIC-1.93□□□□□ -2.72
VSX2P58304 RNA5SP93-201ENST00000362525 114 ntBASIC-1.94□□□□□ -2.72
VSX2P58304 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.94□□□□□ -2.72
VSX2P58304 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.96□□□□□ -2.72
VSX2P58304 SNORD113-2-201ENST00000391082 72 ntBASIC-1.96□□□□□ -2.72
VSX2P58304 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.96□□□□□ -2.72
VSX2P58304 RNU6-258P-201ENST00000390884 101 ntBASIC-1.97□□□□□ -2.72
VSX2P58304 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.97□□□□□ -2.72
VSX2P58304 MIR3170-201ENST00000582699 77 ntBASIC-1.97□□□□□ -2.72
VSX2P58304 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.98□□□□□ -2.73
VSX2P58304 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.98□□□□□ -2.73
VSX2P58304 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.98□□□□□ -2.73
VSX2P58304 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.98□□□□□ -2.73
VSX2P58304 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.98□□□□□ -2.73
VSX2P58304 SNORD54-201ENST00000459159 67 ntBASIC-1.98□□□□□ -2.73
VSX2P58304 MIR664A-201ENST00000626086 82 ntBASIC-1.98□□□□□ -2.73
VSX2P58304 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.98□□□□□ -2.73
VSX2P58304 MIR429-201ENST00000362106 83 ntBASIC-1.99□□□□□ -2.73
VSX2P58304 SNORD113.1-201ENST00000363280 73 ntBASIC-1.99□□□□□ -2.73
VSX2P58304 MT-TR-201ENST00000387439 65 ntBASIC-1.99□□□□□ -2.73
VSX2P58304 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.99□□□□□ -2.73
VSX2P58304 AC006160.2-201ENST00000637708 154 ntBASIC-1.99□□□□□ -2.73
VSX2P58304 RNU6-675P-201ENST00000384236 104 ntBASIC-2□□□□□ -2.73
VSX2P58304 SNORD19B.1-201ENST00000630615 80 ntBASIC-2□□□□□ -2.73
VSX2P58304 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.01□□□□□ -2.73
VSX2P58304 MTND4LP1-201ENST00000446263 157 ntBASIC-2.01□□□□□ -2.73
VSX2P58304 MIR1297-201ENST00000637311 77 ntBASIC-2.01□□□□□ -2.73
VSX2P58304 RNU6-640P-201ENST00000363693 105 ntBASIC-2.02□□□□□ -2.73
VSX2P58304 RNU6-668P-201ENST00000364180 107 ntBASIC-2.02□□□□□ -2.73
VSX2P58304 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.02□□□□□ -2.73
VSX2P58304 SNORD45A-201ENST00000384512 84 ntBASIC-2.02□□□□□ -2.73
VSX2P58304 SNORA41B-201ENST00000384785 128 ntBASIC-2.02□□□□□ -2.73
VSX2P58304 MIR4748-201ENST00000578076 82 ntBASIC-2.02□□□□□ -2.73
VSX2P58304 MIR3671-201ENST00000580455 88 ntBASIC-2.02□□□□□ -2.73
VSX2P58304 MIR548W-201ENST00000581970 74 ntBASIC-2.02□□□□□ -2.73
VSX2P58304 RNA5SP215-201ENST00000363440 122 ntBASIC-2.03□□□□□ -2.73
VSX2P58304 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.04□□□□□ -2.74
VSX2P58304 RNU6-313P-201ENST00000516317 112 ntBASIC-2.04□□□□□ -2.74
VSX2P58304 AC013734.1-201ENST00000619329 111 ntBASIC-2.04□□□□□ -2.74
VSX2P58304 SNORD115-31-201ENST00000365318 82 ntBASIC-2.05□□□□□ -2.74
VSX2P58304 SNORD116-16-201ENST00000384533 92 ntBASIC-2.05□□□□□ -2.74
VSX2P58304 RNU6-844P-201ENST00000517175 102 ntBASIC-2.05□□□□□ -2.74
VSX2P58304 MIR3668-201ENST00000582138 75 ntBASIC-2.05□□□□□ -2.74
VSX2P58304 AC005520.4-201ENST00000604337 90 ntBASIC-2.05□□□□□ -2.74
VSX2P58304 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.05□□□□□ -2.74
VSX2P58304 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.06□□□□□ -2.74
VSX2P58304 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.06□□□□□ -2.74
VSX2P58304 MIR548AA1-201ENST00000384971 97 ntBASIC-2.06□□□□□ -2.74
VSX2P58304 snoU13.10-201ENST00000459301 103 ntBASIC-2.06□□□□□ -2.74
VSX2P58304 MIR8053-201ENST00000613344 75 ntBASIC-2.06□□□□□ -2.74
VSX2P58304 RNU6-755P-201ENST00000364400 103 ntBASIC-2.07□□□□□ -2.74
VSX2P58304 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.07□□□□□ -2.74
VSX2P58304 MIR466-201ENST00000580653 84 ntBASIC-2.07□□□□□ -2.74
VSX2P58304 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.08□□□□□ -2.74
VSX2P58304 MIR548M-201ENST00000408260 86 ntBASIC-2.08□□□□□ -2.74
VSX2P58304 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.09□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms