Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SNORA18.5-201ENST00000516616 101 ntBASIC-1.86□□□□□ -2.71
CLDN6P56747 AP001094.1-201ENST00000579805 193 ntBASIC-1.86□□□□□ -2.71
CLDN6P56747 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.86□□□□□ -2.71
CLDN6P56747 MIR7978-201ENST00000636158 59 ntBASIC-1.86□□□□□ -2.71
CLDN6P56747 RNU5F-1-201ENST00000362507 117 ntBASIC-1.87□□□□□ -2.71
CLDN6P56747 SNORD115-37-201ENST00000363768 82 ntBASIC-1.87□□□□□ -2.71
CLDN6P56747 MIR4679-2-201ENST00000578358 77 ntBASIC-1.87□□□□□ -2.71
CLDN6P56747 SNORD1B-201ENST00000363091 84 ntBASIC-1.88□□□□□ -2.71
CLDN6P56747 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.88□□□□□ -2.71
CLDN6P56747 RNU6-665P-201ENST00000384639 107 ntBASIC-1.88□□□□□ -2.71
CLDN6P56747 MIR124-1-201ENST00000385275 85 ntBASIC-1.88□□□□□ -2.71
CLDN6P56747 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.89□□□□□ -2.71
CLDN6P56747 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.89□□□□□ -2.71
CLDN6P56747 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.89□□□□□ -2.71
CLDN6P56747 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.9□□□□□ -2.71
CLDN6P56747 SNORD60-201ENST00000383903 83 ntBASIC-1.9□□□□□ -2.71
CLDN6P56747 RNU6-520P-201ENST00000384717 104 ntBASIC-1.9□□□□□ -2.71
CLDN6P56747 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.91□□□□□ -2.72
CLDN6P56747 MIR125B1-201ENST00000385236 88 ntBASIC-1.91□□□□□ -2.72
CLDN6P56747 SNORA17.4-201ENST00000391287 132 ntBASIC-1.91□□□□□ -2.72
CLDN6P56747 MIR548AH-201ENST00000637109 76 ntBASIC-1.91□□□□□ -2.72
CLDN6P56747 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.92□□□□□ -2.72
CLDN6P56747 RNU6-854P-201ENST00000364036 107 ntBASIC-1.92□□□□□ -2.72
CLDN6P56747 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.92□□□□□ -2.72
CLDN6P56747 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.92□□□□□ -2.72
CLDN6P56747 SNORA41B-201ENST00000384785 128 ntBASIC-1.92□□□□□ -2.72
CLDN6P56747 MIR569-201ENST00000385228 96 ntBASIC-1.92□□□□□ -2.72
CLDN6P56747 SNORD113-2-201ENST00000391082 72 ntBASIC-1.92□□□□□ -2.72
CLDN6P56747 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.92□□□□□ -2.72
CLDN6P56747 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.94□□□□□ -2.72
CLDN6P56747 RNU6-394P-201ENST00000410735 107 ntBASIC-1.94□□□□□ -2.72
CLDN6P56747 RNU6-772P-201ENST00000516042 105 ntBASIC-1.94□□□□□ -2.72
CLDN6P56747 MIR630-201ENST00000384957 97 ntBASIC-1.95□□□□□ -2.72
CLDN6P56747 MIR5009-201ENST00000578736 100 ntBASIC-1.95□□□□□ -2.72
CLDN6P56747 AL157777.2-201ENST00000258070 137 ntBASIC-1.96□□□□□ -2.72
CLDN6P56747 MIR3144-201ENST00000579460 79 ntBASIC-1.96□□□□□ -2.72
CLDN6P56747 MIR548V-201ENST00000584165 80 ntBASIC-1.96□□□□□ -2.72
CLDN6P56747 MIR429-201ENST00000362106 83 ntBASIC-1.97□□□□□ -2.72
CLDN6P56747 RNY4P13-201ENST00000384284 96 ntBASIC-1.97□□□□□ -2.72
CLDN6P56747 RNU6-804P-201ENST00000384286 107 ntBASIC-1.97□□□□□ -2.72
CLDN6P56747 SNORD116-16-201ENST00000384533 92 ntBASIC-1.97□□□□□ -2.72
CLDN6P56747 RNU6-345P-201ENST00000517001 107 ntBASIC-1.97□□□□□ -2.72
CLDN6P56747 MIR4503-201ENST00000582187 83 ntBASIC-1.97□□□□□ -2.72
CLDN6P56747 MIR4777-201ENST00000583710 86 ntBASIC-1.97□□□□□ -2.72
CLDN6P56747 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.97□□□□□ -2.72
CLDN6P56747 MIR379-201ENST00000362218 67 ntBASIC-1.98□□□□□ -2.73
CLDN6P56747 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.98□□□□□ -2.73
CLDN6P56747 RNU6-361P-201ENST00000364454 107 ntBASIC-1.98□□□□□ -2.73
CLDN6P56747 RNU6-200P-201ENST00000364743 107 ntBASIC-1.98□□□□□ -2.73
CLDN6P56747 RNU6-172P-201ENST00000411000 93 ntBASIC-1.98□□□□□ -2.73
CLDN6P56747 RNU6-982P-201ENST00000516216 102 ntBASIC-1.98□□□□□ -2.73
CLDN6P56747 RNU6-327P-201ENST00000516270 127 ntBASIC-1.98□□□□□ -2.73
CLDN6P56747 RNU6-698P-201ENST00000363523 107 ntBASIC-1.99□□□□□ -2.73
CLDN6P56747 RNU6-34P-201ENST00000364874 107 ntBASIC-1.99□□□□□ -2.73
CLDN6P56747 RNU6-196P-201ENST00000384315 107 ntBASIC-1.99□□□□□ -2.73
CLDN6P56747 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.99□□□□□ -2.73
CLDN6P56747 RNU6-795P-201ENST00000516323 103 ntBASIC-1.99□□□□□ -2.73
CLDN6P56747 Y_RNA.606-201ENST00000410579 103 ntBASIC-2□□□□□ -2.73
CLDN6P56747 RNU6-426P-201ENST00000516464 97 ntBASIC-2.02□□□□□ -2.73
CLDN6P56747 AC004792.1-201ENST00000614523 137 ntBASIC-2.02□□□□□ -2.73
CLDN6P56747 RNU6-554P-201ENST00000410466 106 ntBASIC-2.03□□□□□ -2.73
CLDN6P56747 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.03□□□□□ -2.73
CLDN6P56747 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.04□□□□□ -2.74
CLDN6P56747 RNU6-590P-201ENST00000365039 107 ntBASIC-2.04□□□□□ -2.74
CLDN6P56747 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.04□□□□□ -2.74
CLDN6P56747 MIR4426-201ENST00000640330 63 ntBASIC-2.04□□□□□ -2.74
CLDN6P56747 RNU6-574P-201ENST00000384265 107 ntBASIC-2.05□□□□□ -2.74
CLDN6P56747 SNORD77.2-201ENST00000391045 68 ntBASIC-2.05□□□□□ -2.74
CLDN6P56747 RNU6-972P-201ENST00000391208 107 ntBASIC-2.05□□□□□ -2.74
CLDN6P56747 MTND4LP9-201ENST00000427694 174 ntBASIC-2.05□□□□□ -2.74
CLDN6P56747 RNU6-752P-201ENST00000516376 102 ntBASIC-2.05□□□□□ -2.74
CLDN6P56747 RNA5SP449-201ENST00000516871 130 ntBASIC-2.05□□□□□ -2.74
CLDN6P56747 MIR4796-201ENST00000580742 81 ntBASIC-2.05□□□□□ -2.74
CLDN6P56747 SNORD58A-201ENST00000383875 65 ntBASIC-2.06□□□□□ -2.74
CLDN6P56747 RNU6-330P-201ENST00000363015 107 ntBASIC-2.07□□□□□ -2.74
CLDN6P56747 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.07□□□□□ -2.74
CLDN6P56747 RNY4P18-201ENST00000391107 89 ntBASIC-2.07□□□□□ -2.74
CLDN6P56747 RNU6-300P-201ENST00000459080 104 ntBASIC-2.07□□□□□ -2.74
CLDN6P56747 RNU6-755P-201ENST00000364400 103 ntBASIC-2.09□□□□□ -2.74
CLDN6P56747 RNU6-887P-201ENST00000410660 100 ntBASIC-2.09□□□□□ -2.74
CLDN6P56747 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.09□□□□□ -2.74
CLDN6P56747 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.09□□□□□ -2.74
CLDN6P56747 RNU6-742P-201ENST00000365289 107 ntBASIC-2.1□□□□□ -2.75
CLDN6P56747 RNU6-788P-201ENST00000390967 104 ntBASIC-2.1□□□□□ -2.75
CLDN6P56747 RNU7-107P-201ENST00000459121 61 ntBASIC-2.1□□□□□ -2.75
CLDN6P56747 RNU7-153P-201ENST00000516455 62 ntBASIC-2.1□□□□□ -2.75
CLDN6P56747 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.11□□□□□ -2.75
CLDN6P56747 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.11□□□□□ -2.75
CLDN6P56747 RNU6-810P-201ENST00000364001 107 ntBASIC-2.11□□□□□ -2.75
CLDN6P56747 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.11□□□□□ -2.75
CLDN6P56747 SNORA40-201ENST00000388090 126 ntBASIC-2.11□□□□□ -2.75
CLDN6P56747 MTND5P41-201ENST00000517498 206 ntBASIC-2.11□□□□□ -2.75
CLDN6P56747 RNU6-379P-201ENST00000363813 104 ntBASIC-2.12□□□□□ -2.75
CLDN6P56747 RNU6-604P-201ENST00000390917 100 ntBASIC-2.12□□□□□ -2.75
CLDN6P56747 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.12□□□□□ -2.75
CLDN6P56747 SCARNA23-201ENST00000516060 130 ntBASIC-2.12□□□□□ -2.75
CLDN6P56747 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.13□□□□□ -2.75
CLDN6P56747 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.13□□□□□ -2.75
CLDN6P56747 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.13□□□□□ -2.75
CLDN6P56747 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.13□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 220.1 ms