Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNU6-129P-201ENST00000391022 107 ntBASIC-2.84□□□□□ -2.86
NUP98P52948 MIR3128-201ENST00000581957 66 ntBASIC-2.84□□□□□ -2.86
NUP98P52948 AL035470.1-201ENST00000622571 220 ntBASIC-2.84□□□□□ -2.86
NUP98P52948 SCARNA23-201ENST00000516060 130 ntBASIC-2.84□□□□□ -2.86
NUP98P52948 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.84□□□□□ -2.86
NUP98P52948 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.85□□□□□ -2.87
NUP98P52948 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.85□□□□□ -2.87
NUP98P52948 MIR125B1-201ENST00000385236 88 ntBASIC-2.85□□□□□ -2.87
NUP98P52948 RNU6-982P-201ENST00000516216 102 ntBASIC-2.85□□□□□ -2.87
NUP98P52948 RNU6-176P-201ENST00000517196 105 ntBASIC-2.86□□□□□ -2.87
NUP98P52948 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.86□□□□□ -2.87
NUP98P52948 RNU6-668P-201ENST00000364180 107 ntBASIC-2.86□□□□□ -2.87
NUP98P52948 RNU6-554P-201ENST00000410466 106 ntBASIC-2.86□□□□□ -2.87
NUP98P52948 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.87□□□□□ -2.87
NUP98P52948 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.87□□□□□ -2.87
NUP98P52948 SNORA20.1-201ENST00000364790 130 ntBASIC-2.88□□□□□ -2.87
NUP98P52948 Y_RNA.702-201ENST00000516843 96 ntBASIC-2.88□□□□□ -2.87
NUP98P52948 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.89□□□□□ -2.87
NUP98P52948 MIR519C-201ENST00000385053 87 ntBASIC-2.89□□□□□ -2.87
NUP98P52948 MIR548X2-201ENST00000579776 100 ntBASIC-2.89□□□□□ -2.87
NUP98P52948 RNU6-624P-201ENST00000363411 107 ntBASIC-2.89□□□□□ -2.87
NUP98P52948 MIR1254-1-201ENST00000408257 97 ntBASIC-2.89□□□□□ -2.87
NUP98P52948 RNU7-153P-201ENST00000516455 62 ntBASIC-2.89□□□□□ -2.87
NUP98P52948 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.9□□□□□ -2.87
NUP98P52948 Y_RNA.580-201ENST00000391004 95 ntBASIC-2.91□□□□□ -2.87
NUP98P52948 RNU6-1023P-201ENST00000516137 106 ntBASIC-2.91□□□□□ -2.87
NUP98P52948 RNU6-172P-201ENST00000411000 93 ntBASIC-2.91□□□□□ -2.88
NUP98P52948 RNU6-111P-201ENST00000517179 105 ntBASIC-2.91□□□□□ -2.88
NUP98P52948 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.92□□□□□ -2.88
NUP98P52948 Y_RNA.422-201ENST00000384054 114 ntBASIC-2.93□□□□□ -2.88
NUP98P52948 MTND4LP1-201ENST00000446263 157 ntBASIC-2.93□□□□□ -2.88
NUP98P52948 RNU7-61P-201ENST00000515897 61 ntBASIC-2.93□□□□□ -2.88
NUP98P52948 RNU6-772P-201ENST00000516042 105 ntBASIC-2.93□□□□□ -2.88
NUP98P52948 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.93□□□□□ -2.88
NUP98P52948 AL157777.2-201ENST00000258070 137 ntBASIC-2.93□□□□□ -2.88
NUP98P52948 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.93□□□□□ -2.88
NUP98P52948 AC062037.2-201ENST00000610137 73 ntBASIC-2.93□□□□□ -2.88
NUP98P52948 SNORD45.2-201ENST00000363552 72 ntBASIC-2.94□□□□□ -2.88
NUP98P52948 MTATP8P1-201ENST00000467115 207 ntBASIC-2.94□□□□□ -2.88
NUP98P52948 RNU6-182P-201ENST00000516970 105 ntBASIC-2.94□□□□□ -2.88
NUP98P52948 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.95□□□□□ -2.88
NUP98P52948 RNU6-300P-201ENST00000459080 104 ntBASIC-2.95□□□□□ -2.88
NUP98P52948 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.95□□□□□ -2.88
NUP98P52948 RNU6-590P-201ENST00000365039 107 ntBASIC-2.96□□□□□ -2.88
NUP98P52948 RNU7-160P-201ENST00000516660 62 ntBASIC-2.96□□□□□ -2.88
NUP98P52948 SNORD45.1-201ENST00000363181 77 ntBASIC-2.96□□□□□ -2.88
NUP98P52948 MIR548F4-201ENST00000408515 105 ntBASIC-2.98□□□□□ -2.89
NUP98P52948 MIR548S-201ENST00000581352 82 ntBASIC-2.98□□□□□ -2.89
NUP98P52948 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.99□□□□□ -2.89
NUP98P52948 RNU6-867P-201ENST00000364956 107 ntBASIC-2.99□□□□□ -2.89
NUP98P52948 RNU7-120P-201ENST00000459334 63 ntBASIC-2.99□□□□□ -2.89
NUP98P52948 AL359920.1-201ENST00000618332 176 ntBASIC-2.99□□□□□ -2.89
NUP98P52948 RNU6-1296P-201ENST00000383879 107 ntBASIC-3□□□□□ -2.89
NUP98P52948 RNU6-1160P-201ENST00000384546 104 ntBASIC-3□□□□□ -2.89
NUP98P52948 MIR4426-201ENST00000640330 63 ntBASIC-3□□□□□ -2.89
NUP98P52948 RNA5SP173-201ENST00000364857 136 ntBASIC-3□□□□□ -2.89
NUP98P52948 RNU6-394P-201ENST00000410735 107 ntBASIC-3□□□□□ -2.89
NUP98P52948 Y_RNA.720-201ENST00000517166 92 ntBASIC-3□□□□□ -2.89
NUP98P52948 AL117187.1-201ENST00000555482 181 ntBASIC-3□□□□□ -2.89
NUP98P52948 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.01□□□□□ -2.89
NUP98P52948 AC044792.1-201ENST00000593294 196 ntBASIC-3.01□□□□□ -2.89
NUP98P52948 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.02□□□□□ -2.89
NUP98P52948 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.02□□□□□ -2.89
NUP98P52948 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.03□□□□□ -2.89
NUP98P52948 SNORD113.1-201ENST00000363280 73 ntBASIC-3.03□□□□□ -2.89
NUP98P52948 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.03□□□□□ -2.89
NUP98P52948 AC008737.2-201ENST00000599446 118 ntBASIC-3.03□□□□□ -2.89
NUP98P52948 MIR8053-201ENST00000613344 75 ntBASIC-3.03□□□□□ -2.89
NUP98P52948 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.03□□□□□ -2.89
NUP98P52948 SNORD116-18-201ENST00000383961 92 ntBASIC-3.03□□□□□ -2.89
NUP98P52948 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.04□□□□□ -2.9
NUP98P52948 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.05□□□□□ -2.9
NUP98P52948 AP001318.4-201ENST00000616637 121 ntBASIC-3.05□□□□□ -2.9
NUP98P52948 RNU6-755P-201ENST00000364400 103 ntBASIC-3.05□□□□□ -2.9
NUP98P52948 RNU6-574P-201ENST00000384265 107 ntBASIC-3.05□□□□□ -2.9
NUP98P52948 MTCYBP6-201ENST00000441810 138 ntBASIC-3.05□□□□□ -2.9
NUP98P52948 RNU6-303P-201ENST00000517091 106 ntBASIC-3.05□□□□□ -2.9
NUP98P52948 RNU6-810P-201ENST00000364001 107 ntBASIC-3.06□□□□□ -2.9
NUP98P52948 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.06□□□□□ -2.9
NUP98P52948 MIR1297-201ENST00000637311 77 ntBASIC-3.06□□□□□ -2.9
NUP98P52948 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.07□□□□□ -2.9
NUP98P52948 MTND4LP9-201ENST00000427694 174 ntBASIC-3.07□□□□□ -2.9
NUP98P52948 RNU6-426P-201ENST00000516464 97 ntBASIC-3.07□□□□□ -2.9
NUP98P52948 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.07□□□□□ -2.9
NUP98P52948 RNU6-737P-201ENST00000365370 107 ntBASIC-3.07□□□□□ -2.9
NUP98P52948 RNU6-904P-201ENST00000516206 101 ntBASIC-3.07□□□□□ -2.9
NUP98P52948 MIR1302-3-201ENST00000408128 138 ntBASIC-3.08□□□□□ -2.9
NUP98P52948 AC062037.1-201ENST00000605302 128 ntBASIC-3.08□□□□□ -2.9
NUP98P52948 RNU6-330P-201ENST00000363015 107 ntBASIC-3.09□□□□□ -2.9
NUP98P52948 SNORA8.1-201ENST00000384250 140 ntBASIC-3.09□□□□□ -2.9
NUP98P52948 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.1□□□□□ -2.91
NUP98P52948 RNU6-604P-201ENST00000390917 100 ntBASIC-3.1□□□□□ -2.91
NUP98P52948 U7.3-201ENST00000616123 62 ntBASIC-3.1□□□□□ -2.91
NUP98P52948 RNU6-822P-201ENST00000362707 106 ntBASIC-3.11□□□□□ -2.91
NUP98P52948 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.11□□□□□ -2.91
NUP98P52948 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.11□□□□□ -2.91
NUP98P52948 RNY4P13-201ENST00000384284 96 ntBASIC-3.12□□□□□ -2.91
NUP98P52948 MIR569-201ENST00000385228 96 ntBASIC-3.12□□□□□ -2.91
NUP98P52948 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.12□□□□□ -2.91
NUP98P52948 MIR606-201ENST00000384851 96 ntBASIC-3.12□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 439.5 ms