Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 RNU6-983P-201ENST00000516004 103 ntBASIC-1.73□□□□□ -2.69
BRCA1P38398 RNU6-608P-201ENST00000383927 104 ntBASIC-1.73□□□□□ -2.69
BRCA1P38398 RNU6-540P-201ENST00000384622 101 ntBASIC-1.73□□□□□ -2.69
BRCA1P38398 AC005520.4-201ENST00000604337 90 ntBASIC-1.73□□□□□ -2.69
BRCA1P38398 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.74□□□□□ -2.69
BRCA1P38398 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.75□□□□□ -2.69
BRCA1P38398 RNU6-834P-201ENST00000362367 110 ntBASIC-1.75□□□□□ -2.69
BRCA1P38398 RNU6-247P-201ENST00000362636 107 ntBASIC-1.75□□□□□ -2.69
BRCA1P38398 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.75□□□□□ -2.69
BRCA1P38398 SNORD116-16-201ENST00000384533 92 ntBASIC-1.75□□□□□ -2.69
BRCA1P38398 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.75□□□□□ -2.69
BRCA1P38398 MIR154-201ENST00000385243 84 ntBASIC-1.75□□□□□ -2.69
BRCA1P38398 MIR3170-201ENST00000582699 77 ntBASIC-1.75□□□□□ -2.69
BRCA1P38398 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.76□□□□□ -2.69
BRCA1P38398 RNU6-219P-201ENST00000364728 107 ntBASIC-1.76□□□□□ -2.69
BRCA1P38398 RNU6-81P-201ENST00000365608 104 ntBASIC-1.76□□□□□ -2.69
BRCA1P38398 MIR548BB-201ENST00000626714 66 ntBASIC-1.76□□□□□ -2.69
BRCA1P38398 RNU6-675P-201ENST00000384236 104 ntBASIC-1.77□□□□□ -2.69
BRCA1P38398 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.77□□□□□ -2.69
BRCA1P38398 MIR548H1-201ENST00000408610 102 ntBASIC-1.77□□□□□ -2.69
BRCA1P38398 RNU6-497P-201ENST00000365316 104 ntBASIC-1.77□□□□□ -2.69
BRCA1P38398 RNU6-129P-201ENST00000391022 107 ntBASIC-1.77□□□□□ -2.69
BRCA1P38398 MIR3671-201ENST00000580455 88 ntBASIC-1.77□□□□□ -2.69
BRCA1P38398 AL365222.1-201ENST00000614661 98 ntBASIC-1.77□□□□□ -2.69
BRCA1P38398 MALAT1.1-201ENST00000618249 95 ntBASIC-1.77□□□□□ -2.69
BRCA1P38398 RNU6-686P-201ENST00000364839 107 ntBASIC-1.78□□□□□ -2.69
BRCA1P38398 MIR664A-201ENST00000626086 82 ntBASIC-1.78□□□□□ -2.69
BRCA1P38398 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.79□□□□□ -2.7
BRCA1P38398 RNU6-542P-201ENST00000516405 103 ntBASIC-1.79□□□□□ -2.7
BRCA1P38398 RNU6-668P-201ENST00000364180 107 ntBASIC-1.8□□□□□ -2.7
BRCA1P38398 RNY1P1-201ENST00000364372 112 ntBASIC-1.8□□□□□ -2.7
BRCA1P38398 MIR520D-201ENST00000385002 87 ntBASIC-1.8□□□□□ -2.7
BRCA1P38398 RNU6-380P-201ENST00000410207 107 ntBASIC-1.8□□□□□ -2.7
BRCA1P38398 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.81□□□□□ -2.7
BRCA1P38398 SNORD45A-201ENST00000384512 84 ntBASIC-1.81□□□□□ -2.7
BRCA1P38398 RNU6-604P-201ENST00000390917 100 ntBASIC-1.81□□□□□ -2.7
BRCA1P38398 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.81□□□□□ -2.7
BRCA1P38398 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.81□□□□□ -2.7
BRCA1P38398 RNU6-70P-201ENST00000516438 60 ntBASIC-1.81□□□□□ -2.7
BRCA1P38398 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.82□□□□□ -2.7
BRCA1P38398 RNU6-979P-201ENST00000383896 107 ntBASIC-1.82□□□□□ -2.7
BRCA1P38398 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.82□□□□□ -2.7
BRCA1P38398 SNORD1B-201ENST00000363091 84 ntBASIC-1.83□□□□□ -2.7
BRCA1P38398 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.83□□□□□ -2.7
BRCA1P38398 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.83□□□□□ -2.7
BRCA1P38398 SNORA41B-201ENST00000384785 128 ntBASIC-1.84□□□□□ -2.7
BRCA1P38398 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.84□□□□□ -2.7
BRCA1P38398 RNY4P7-201ENST00000364600 96 ntBASIC-1.84□□□□□ -2.7
BRCA1P38398 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.84□□□□□ -2.7
BRCA1P38398 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.85□□□□□ -2.71
BRCA1P38398 RNU6-598P-201ENST00000364017 105 ntBASIC-1.86□□□□□ -2.71
BRCA1P38398 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.86□□□□□ -2.71
BRCA1P38398 RNU6-563P-201ENST00000364872 108 ntBASIC-1.86□□□□□ -2.71
BRCA1P38398 RNU6-669P-201ENST00000365575 107 ntBASIC-1.86□□□□□ -2.71
BRCA1P38398 RNA5SP173-201ENST00000364857 136 ntBASIC-1.87□□□□□ -2.71
BRCA1P38398 RNU6-841P-201ENST00000383872 107 ntBASIC-1.87□□□□□ -2.71
BRCA1P38398 RNU6-402P-201ENST00000410678 103 ntBASIC-1.87□□□□□ -2.71
BRCA1P38398 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.88□□□□□ -2.71
BRCA1P38398 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.88□□□□□ -2.71
BRCA1P38398 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.88□□□□□ -2.71
BRCA1P38398 SNORD18.1-201ENST00000363807 70 ntBASIC-1.88□□□□□ -2.71
BRCA1P38398 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.88□□□□□ -2.71
BRCA1P38398 RNU6-228P-201ENST00000362700 106 ntBASIC-1.89□□□□□ -2.71
BRCA1P38398 SNORA27.2-201ENST00000363365 126 ntBASIC-1.89□□□□□ -2.71
BRCA1P38398 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.89□□□□□ -2.71
BRCA1P38398 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.9□□□□□ -2.71
BRCA1P38398 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.9□□□□□ -2.71
BRCA1P38398 RNA5SP86-201ENST00000390869 98 ntBASIC-1.9□□□□□ -2.71
BRCA1P38398 MIR7978-201ENST00000636158 59 ntBASIC-1.9□□□□□ -2.71
BRCA1P38398 RNU6-315P-201ENST00000362666 107 ntBASIC-1.91□□□□□ -2.72
BRCA1P38398 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.91□□□□□ -2.72
BRCA1P38398 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.91□□□□□ -2.72
BRCA1P38398 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.91□□□□□ -2.72
BRCA1P38398 RNU6-995P-201ENST00000391244 107 ntBASIC-1.91□□□□□ -2.72
BRCA1P38398 RNY4P30-201ENST00000410216 95 ntBASIC-1.91□□□□□ -2.72
BRCA1P38398 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.91□□□□□ -2.72
BRCA1P38398 SNORD60-201ENST00000383903 83 ntBASIC-1.92□□□□□ -2.72
BRCA1P38398 MIR3123-201ENST00000583417 75 ntBASIC-1.92□□□□□ -2.72
BRCA1P38398 MIR548AM-201ENST00000584298 74 ntBASIC-1.92□□□□□ -2.72
BRCA1P38398 AC013734.1-201ENST00000619329 111 ntBASIC-1.92□□□□□ -2.72
BRCA1P38398 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.93□□□□□ -2.72
BRCA1P38398 RNU7-171P-201ENST00000459581 62 ntBASIC-1.93□□□□□ -2.72
BRCA1P38398 RNU6-844P-201ENST00000517175 102 ntBASIC-1.93□□□□□ -2.72
BRCA1P38398 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.94□□□□□ -2.72
BRCA1P38398 RNU6-258P-201ENST00000390884 101 ntBASIC-1.94□□□□□ -2.72
BRCA1P38398 MIR3910-1-201ENST00000580936 111 ntBASIC-1.94□□□□□ -2.72
BRCA1P38398 MIR4484-201ENST00000582855 83 ntBASIC-1.94□□□□□ -2.72
BRCA1P38398 U6.97-201ENST00000636904 101 ntBASIC-1.94□□□□□ -2.72
BRCA1P38398 RNA5SP93-201ENST00000362525 114 ntBASIC-1.95□□□□□ -2.72
BRCA1P38398 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.95□□□□□ -2.72
BRCA1P38398 SNORD20-201ENST00000384550 80 ntBASIC-1.95□□□□□ -2.72
BRCA1P38398 MIR487B-201ENST00000385021 84 ntBASIC-1.95□□□□□ -2.72
BRCA1P38398 MIR579-201ENST00000385221 98 ntBASIC-1.95□□□□□ -2.72
BRCA1P38398 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.95□□□□□ -2.72
BRCA1P38398 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.96□□□□□ -2.72
BRCA1P38398 MIR488-201ENST00000365739 83 ntBASIC-1.96□□□□□ -2.72
BRCA1P38398 RNU6-32P-201ENST00000383948 107 ntBASIC-1.96□□□□□ -2.72
BRCA1P38398 RNU6-13P-201ENST00000384248 107 ntBASIC-1.96□□□□□ -2.72
BRCA1P38398 RNU6-12P-201ENST00000384604 107 ntBASIC-1.96□□□□□ -2.72
BRCA1P38398 RNU6-41P-201ENST00000384741 107 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms