Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 RNU4-88P-201ENST00000411220 86 ntBASIC0.06□□□□□ -2.4
SNHG28P0DPA3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
SNHG28P0DPA3 RNU6-753P-201ENST00000363926 107 ntBASIC0.05□□□□□ -2.4
SNHG28P0DPA3 RNU4-33P-201ENST00000364316 85 ntBASIC0.05□□□□□ -2.4
SNHG28P0DPA3 SNORD49B-201ENST00000365172 72 ntBASIC0.05□□□□□ -2.4
SNHG28P0DPA3 MIR520D-201ENST00000385002 87 ntBASIC0.05□□□□□ -2.4
SNHG28P0DPA3 RNU6-258P-201ENST00000390884 101 ntBASIC0.05□□□□□ -2.4
SNHG28P0DPA3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.04□□□□□ -2.4
SNHG28P0DPA3 RNU6-901P-201ENST00000384593 106 ntBASIC0.04□□□□□ -2.4
SNHG28P0DPA3 MIR548AA1-201ENST00000384971 97 ntBASIC0.04□□□□□ -2.4
SNHG28P0DPA3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
SNHG28P0DPA3 RNA5SP169-201ENST00000517268 117 ntBASIC0.04□□□□□ -2.4
SNHG28P0DPA3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
SNHG28P0DPA3 MIR429-201ENST00000362106 83 ntBASIC0.03□□□□□ -2.4
SNHG28P0DPA3 RNU6-732P-201ENST00000516033 103 ntBASIC0.03□□□□□ -2.4
SNHG28P0DPA3 RNU6-419P-201ENST00000517030 63 ntBASIC0.03□□□□□ -2.4
SNHG28P0DPA3 RNU6-1238P-201ENST00000517215 102 ntBASIC0.03□□□□□ -2.4
SNHG28P0DPA3 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
SNHG28P0DPA3 MIR3170-201ENST00000582699 77 ntBASIC0.03□□□□□ -2.4
SNHG28P0DPA3 MIR6851-201ENST00000617060 67 ntBASIC0.03□□□□□ -2.4
SNHG28P0DPA3 RNU6-808P-201ENST00000391233 108 ntBASIC0.02□□□□□ -2.41
SNHG28P0DPA3 RNU6-1206P-201ENST00000516339 103 ntBASIC0.02□□□□□ -2.41
SNHG28P0DPA3 Y_RNA.139-201ENST00000363464 102 ntBASIC0.01□□□□□ -2.41
SNHG28P0DPA3 SNORD63.1-201ENST00000516178 80 ntBASIC0.01□□□□□ -2.41
SNHG28P0DPA3 MIR5190-201ENST00000581537 80 ntBASIC0.01□□□□□ -2.41
SNHG28P0DPA3 RNU6-46P-201ENST00000383860 107 ntBASIC0□□□□□ -2.41
SNHG28P0DPA3 RNU7-160P-201ENST00000516660 62 ntBASIC0□□□□□ -2.41
SNHG28P0DPA3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.01□□□□□ -2.41
SNHG28P0DPA3 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.01□□□□□ -2.41
SNHG28P0DPA3 SNORD22.1-201ENST00000516331 125 ntBASIC-0.02□□□□□ -2.41
SNHG28P0DPA3 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
SNHG28P0DPA3 SNORD114-12-201ENST00000365400 75 ntBASIC-0.03□□□□□ -2.41
SNHG28P0DPA3 RNU6-721P-201ENST00000410155 105 ntBASIC-0.04□□□□□ -2.42
SNHG28P0DPA3 RNA5SP66-201ENST00000517178 101 ntBASIC-0.04□□□□□ -2.42
SNHG28P0DPA3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.04□□□□□ -2.42
SNHG28P0DPA3 MIR548F3-201ENST00000408509 87 ntBASIC-0.05□□□□□ -2.42
SNHG28P0DPA3 SNORD63.2-201ENST00000516303 64 ntBASIC-0.05□□□□□ -2.42
SNHG28P0DPA3 MIR4768-201ENST00000585270 74 ntBASIC-0.05□□□□□ -2.42
SNHG28P0DPA3 MIR329-2-201ENST00000385029 84 ntBASIC-0.06□□□□□ -2.42
SNHG28P0DPA3 RNU6-995P-201ENST00000391244 107 ntBASIC-0.06□□□□□ -2.42
SNHG28P0DPA3 SNORD18.2-201ENST00000459604 70 ntBASIC-0.06□□□□□ -2.42
SNHG28P0DPA3 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.07□□□□□ -2.42
SNHG28P0DPA3 RNU6-828P-201ENST00000364876 107 ntBASIC-0.07□□□□□ -2.42
SNHG28P0DPA3 MIR518B-201ENST00000385127 83 ntBASIC-0.07□□□□□ -2.42
SNHG28P0DPA3 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
SNHG28P0DPA3 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.07□□□□□ -2.42
SNHG28P0DPA3 RNU6-608P-201ENST00000383927 104 ntBASIC-0.08□□□□□ -2.42
SNHG28P0DPA3 MIR548Q-201ENST00000408404 100 ntBASIC-0.08□□□□□ -2.42
SNHG28P0DPA3 AL451105.1-201ENST00000450005 189 ntBASIC-0.08□□□□□ -2.42
SNHG28P0DPA3 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.08□□□□□ -2.42
SNHG28P0DPA3 AC093726.3-201ENST00000637588 150 ntBASIC-0.08□□□□□ -2.42
SNHG28P0DPA3 SNORA18.1-201ENST00000363418 128 ntBASIC-0.09□□□□□ -2.42
SNHG28P0DPA3 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.09□□□□□ -2.42
SNHG28P0DPA3 MIR29B1-201ENST00000385015 81 ntBASIC-0.09□□□□□ -2.42
SNHG28P0DPA3 RNU6-930P-201ENST00000390938 100 ntBASIC-0.09□□□□□ -2.42
SNHG28P0DPA3 SNORA26.4-201ENST00000391188 123 ntBASIC-0.09□□□□□ -2.42
SNHG28P0DPA3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.09□□□□□ -2.42
SNHG28P0DPA3 MIR4788-201ENST00000639104 80 ntBASIC-0.09□□□□□ -2.42
SNHG28P0DPA3 SNORD114-17-201ENST00000364699 75 ntBASIC-0.1□□□□□ -2.43
SNHG28P0DPA3 SNORD74.6-201ENST00000364796 70 ntBASIC-0.1□□□□□ -2.43
SNHG28P0DPA3 RNA5SP300-201ENST00000391197 107 ntBASIC-0.1□□□□□ -2.43
SNHG28P0DPA3 AP000533.3-201ENST00000447704 118 ntBASIC-0.1□□□□□ -2.43
SNHG28P0DPA3 SNORD4A-201ENST00000459174 72 ntBASIC-0.1□□□□□ -2.43
SNHG28P0DPA3 RNU6-742P-201ENST00000365289 107 ntBASIC-0.11□□□□□ -2.43
SNHG28P0DPA3 SNORD75.1-201ENST00000408373 60 ntBASIC-0.11□□□□□ -2.43
SNHG28P0DPA3 MIR3179-1-201ENST00000578940 84 ntBASIC-0.11□□□□□ -2.43
SNHG28P0DPA3 MIR3179-2-201ENST00000579107 84 ntBASIC-0.11□□□□□ -2.43
SNHG28P0DPA3 MIR3179-3-201ENST00000579566 84 ntBASIC-0.11□□□□□ -2.43
SNHG28P0DPA3 MIR3666-201ENST00000607845 111 ntBASIC-0.11□□□□□ -2.43
SNHG28P0DPA3 MIR3179-4-201ENST00000617599 84 ntBASIC-0.11□□□□□ -2.43
SNHG28P0DPA3 RNU6-838P-201ENST00000363399 108 ntBASIC-0.12□□□□□ -2.43
SNHG28P0DPA3 AC104692.1-201ENST00000472406 90 ntBASIC-0.12□□□□□ -2.43
SNHG28P0DPA3 MIR5683-201ENST00000636514 76 ntBASIC-0.12□□□□□ -2.43
SNHG28P0DPA3 MIR371B-201ENST00000638082 66 ntBASIC-0.12□□□□□ -2.43
SNHG28P0DPA3 RNU6-986P-201ENST00000363133 102 ntBASIC-0.13□□□□□ -2.43
SNHG28P0DPA3 RNU6-247P-201ENST00000362636 107 ntBASIC-0.14□□□□□ -2.43
SNHG28P0DPA3 SNORD115-33-201ENST00000363723 82 ntBASIC-0.14□□□□□ -2.43
SNHG28P0DPA3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
SNHG28P0DPA3 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.14□□□□□ -2.43
SNHG28P0DPA3 RPL35AP4-201ENST00000412007 102 ntBASIC-0.14□□□□□ -2.43
SNHG28P0DPA3 RNA5SP257-201ENST00000363023 116 ntBASIC-0.15□□□□□ -2.43
SNHG28P0DPA3 MIR545-201ENST00000385085 106 ntBASIC-0.15□□□□□ -2.43
SNHG28P0DPA3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.15□□□□□ -2.43
SNHG28P0DPA3 RNU6-530P-201ENST00000391180 107 ntBASIC-0.16□□□□□ -2.44
SNHG28P0DPA3 AL353691.2-201ENST00000443795 59 ntBASIC-0.16□□□□□ -2.44
SNHG28P0DPA3 MIR4263-201ENST00000584745 83 ntBASIC-0.16□□□□□ -2.44
SNHG28P0DPA3 MIR204-201ENST00000385200 110 ntBASIC-0.17□□□□□ -2.44
SNHG28P0DPA3 MIR4645-201ENST00000583158 77 ntBASIC-0.17□□□□□ -2.44
SNHG28P0DPA3 MIR4436A-201ENST00000585278 85 ntBASIC-0.17□□□□□ -2.44
SNHG28P0DPA3 MIR1468-201ENST00000410600 86 ntBASIC-0.18□□□□□ -2.44
SNHG28P0DPA3 RNY3P8-201ENST00000411366 126 ntBASIC-0.18□□□□□ -2.44
SNHG28P0DPA3 MIR548AL-201ENST00000578416 97 ntBASIC-0.18□□□□□ -2.44
SNHG28P0DPA3 MIR1295B-201ENST00000636144 60 ntBASIC-0.18□□□□□ -2.44
SNHG28P0DPA3 RNA5SP26-201ENST00000362406 119 ntBASIC-0.19□□□□□ -2.44
SNHG28P0DPA3 MIR548H4-201ENST00000408689 111 ntBASIC-0.19□□□□□ -2.44
SNHG28P0DPA3 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.19□□□□□ -2.44
SNHG28P0DPA3 SNORA27.2-201ENST00000363365 126 ntBASIC-0.2□□□□□ -2.44
SNHG28P0DPA3 RNU6-431P-201ENST00000383874 107 ntBASIC-0.21□□□□□ -2.44
SNHG28P0DPA3 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.22□□□□□ -2.44
SNHG28P0DPA3 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 370.6 ms