Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNU6-633P-201ENST00000362612 103 ntBASIC-3.56□□□□□ -2.98
APOEP02649 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.56□□□□□ -2.98
APOEP02649 SNORD116-21-201ENST00000384507 92 ntBASIC-3.56□□□□□ -2.98
APOEP02649 MTATP8P2-201ENST00000435212 202 ntBASIC-3.56□□□□□ -2.98
APOEP02649 MTND4LP1-201ENST00000446263 157 ntBASIC-3.56□□□□□ -2.98
APOEP02649 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.56□□□□□ -2.98
APOEP02649 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.57□□□□□ -2.98
APOEP02649 SNORA41B-201ENST00000384785 128 ntBASIC-3.57□□□□□ -2.98
APOEP02649 MIR1302-5-201ENST00000408164 150 ntBASIC-3.57□□□□□ -2.98
APOEP02649 SNORD63.2-201ENST00000516303 64 ntBASIC-3.57□□□□□ -2.98
APOEP02649 RNU7-151P-201ENST00000516930 53 ntBASIC-3.57□□□□□ -2.98
APOEP02649 RNU6-182P-201ENST00000516970 105 ntBASIC-3.57□□□□□ -2.98
APOEP02649 AC074348.1-201ENST00000426503 132 ntBASIC-3.58□□□□□ -2.98
APOEP02649 AC093729.1-201ENST00000513074 128 ntBASIC-3.58□□□□□ -2.98
APOEP02649 RNU6-659P-201ENST00000516454 104 ntBASIC-3.58□□□□□ -2.98
APOEP02649 RNA5SP215-201ENST00000363440 122 ntBASIC-3.59□□□□□ -2.98
APOEP02649 Y_RNA.812-201ENST00000610788 101 ntBASIC-3.59□□□□□ -2.98
APOEP02649 Y_RNA.784-201ENST00000613803 101 ntBASIC-3.59□□□□□ -2.98
APOEP02649 Y_RNA.787-201ENST00000616522 101 ntBASIC-3.59□□□□□ -2.98
APOEP02649 Y_RNA.780-201ENST00000617336 101 ntBASIC-3.59□□□□□ -2.98
APOEP02649 Y_RNA.801-201ENST00000619005 101 ntBASIC-3.59□□□□□ -2.98
APOEP02649 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.59□□□□□ -2.98
APOEP02649 RNU6-669P-201ENST00000365575 107 ntBASIC-3.6□□□□□ -2.99
APOEP02649 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.61□□□□□ -2.99
APOEP02649 RNU6-557P-201ENST00000516842 110 ntBASIC-3.61□□□□□ -2.99
APOEP02649 RNU6-797P-201ENST00000363101 109 ntBASIC-3.62□□□□□ -2.99
APOEP02649 RNU6-694P-201ENST00000364071 147 ntBASIC-3.62□□□□□ -2.99
APOEP02649 RNU6-668P-201ENST00000364180 107 ntBASIC-3.62□□□□□ -2.99
APOEP02649 RNY4P7-201ENST00000364600 96 ntBASIC-3.62□□□□□ -2.99
APOEP02649 RNU6-867P-201ENST00000364956 107 ntBASIC-3.62□□□□□ -2.99
APOEP02649 MIR579-201ENST00000385221 98 ntBASIC-3.62□□□□□ -2.99
APOEP02649 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.63□□□□□ -2.99
APOEP02649 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.63□□□□□ -2.99
APOEP02649 RNY4P18-201ENST00000391107 89 ntBASIC-3.63□□□□□ -2.99
APOEP02649 RNY3P8-201ENST00000411366 126 ntBASIC-3.63□□□□□ -2.99
APOEP02649 MIR4668-201ENST00000582284 70 ntBASIC-3.63□□□□□ -2.99
APOEP02649 AL353621.2-201ENST00000605340 133 ntBASIC-3.63□□□□□ -2.99
APOEP02649 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.63□□□□□ -2.99
APOEP02649 SNORD18C-201ENST00000362704 69 ntBASIC-3.64□□□□□ -2.99
APOEP02649 SNORA63-201ENST00000363450 132 ntBASIC-3.65□□□□□ -2.99
APOEP02649 RNU6-686P-201ENST00000364839 107 ntBASIC-3.65□□□□□ -2.99
APOEP02649 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.65□□□□□ -2.99
APOEP02649 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.66□□□□□ -3
APOEP02649 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.66□□□□□ -3
APOEP02649 RNA5SP173-201ENST00000364857 136 ntBASIC-3.67□□□□□ -3
APOEP02649 RNU6-196P-201ENST00000384315 107 ntBASIC-3.67□□□□□ -3
APOEP02649 MIR7978-201ENST00000636158 59 ntBASIC-3.67□□□□□ -3
APOEP02649 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.68□□□□□ -3
APOEP02649 RNU7-200P-201ENST00000516105 62 ntBASIC-3.68□□□□□ -3
APOEP02649 RNU6-379P-201ENST00000363813 104 ntBASIC-3.69□□□□□ -3
APOEP02649 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.69□□□□□ -3
APOEP02649 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.69□□□□□ -3
APOEP02649 SNORA19-201ENST00000384737 128 ntBASIC-3.69□□□□□ -3
APOEP02649 MIR4484-201ENST00000582855 83 ntBASIC-3.69□□□□□ -3
APOEP02649 RNU6-554P-201ENST00000410466 106 ntBASIC-3.7□□□□□ -3
APOEP02649 Y_RNA.604-201ENST00000410574 102 ntBASIC-3.7□□□□□ -3
APOEP02649 RNU6-172P-201ENST00000411000 93 ntBASIC-3.7□□□□□ -3
APOEP02649 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.7□□□□□ -3
APOEP02649 RNU6-523P-201ENST00000516304 54 ntBASIC-3.7□□□□□ -3
APOEP02649 RNU6-388P-201ENST00000517012 105 ntBASIC-3.7□□□□□ -3
APOEP02649 RNU6-389P-201ENST00000517048 105 ntBASIC-3.7□□□□□ -3
APOEP02649 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.71□□□□□ -3
APOEP02649 SNORD113.1-201ENST00000363280 73 ntBASIC-3.71□□□□□ -3
APOEP02649 SNORD113-3-201ENST00000364830 72 ntBASIC-3.71□□□□□ -3
APOEP02649 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.72□□□□□ -3
APOEP02649 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.72□□□□□ -3
APOEP02649 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.72□□□□□ -3
APOEP02649 MIR581-201ENST00000384895 96 ntBASIC-3.73□□□□□ -3.01
APOEP02649 RNU6-327P-201ENST00000516270 127 ntBASIC-3.73□□□□□ -3.01
APOEP02649 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.73□□□□□ -3.01
APOEP02649 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.74□□□□□ -3.01
APOEP02649 MIR8053-201ENST00000613344 75 ntBASIC-3.74□□□□□ -3.01
APOEP02649 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.75□□□□□ -3.01
APOEP02649 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.75□□□□□ -3.01
APOEP02649 RNU6-974P-201ENST00000384099 108 ntBASIC-3.75□□□□□ -3.01
APOEP02649 RNU6-886P-201ENST00000384319 105 ntBASIC-3.75□□□□□ -3.01
APOEP02649 RNU6-106P-201ENST00000384405 107 ntBASIC-3.75□□□□□ -3.01
APOEP02649 MIR125B1-201ENST00000385236 88 ntBASIC-3.75□□□□□ -3.01
APOEP02649 RNY1P1-201ENST00000364372 112 ntBASIC-3.77□□□□□ -3.01
APOEP02649 SNORD45A-201ENST00000384512 84 ntBASIC-3.77□□□□□ -3.01
APOEP02649 RNU6-346P-201ENST00000516288 111 ntBASIC-3.77□□□□□ -3.01
APOEP02649 RNU6-129P-201ENST00000391022 107 ntBASIC-3.78□□□□□ -3.01
APOEP02649 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.79□□□□□ -3.02
APOEP02649 MIR548BB-201ENST00000626714 66 ntBASIC-3.79□□□□□ -3.02
APOEP02649 MIR1297-201ENST00000637311 77 ntBASIC-3.79□□□□□ -3.02
APOEP02649 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.81□□□□□ -3.02
APOEP02649 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.81□□□□□ -3.02
APOEP02649 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.82□□□□□ -3.02
APOEP02649 RNU6-219P-201ENST00000364728 107 ntBASIC-3.82□□□□□ -3.02
APOEP02649 SNORD116-22-201ENST00000384430 92 ntBASIC-3.82□□□□□ -3.02
APOEP02649 RNU6-267P-201ENST00000516714 103 ntBASIC-3.82□□□□□ -3.02
APOEP02649 MIR5693-201ENST00000577722 73 ntBASIC-3.82□□□□□ -3.02
APOEP02649 RNU6-497P-201ENST00000365316 104 ntBASIC-3.83□□□□□ -3.02
APOEP02649 RNU6-402P-201ENST00000410678 103 ntBASIC-3.83□□□□□ -3.02
APOEP02649 RNY4-201ENST00000516507 96 ntBASIC-3.83□□□□□ -3.02
APOEP02649 SNORA63.4-201ENST00000362763 126 ntBASIC-3.84□□□□□ -3.02
APOEP02649 SNORD116-14-201ENST00000383894 92 ntBASIC-3.85□□□□□ -3.03
APOEP02649 SNORD116-17-201ENST00000383929 92 ntBASIC-3.85□□□□□ -3.03
APOEP02649 SNORD116-15-201ENST00000384445 92 ntBASIC-3.85□□□□□ -3.03
APOEP02649 RNU6-520P-201ENST00000384717 104 ntBASIC-3.85□□□□□ -3.03
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms