Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 MIR2052-201ENST00000636055 55 ntBASIC-1.72□□□□□ -2.68
CDH16O75309 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.72□□□□□ -2.68
CDH16O75309 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.73□□□□□ -2.69
CDH16O75309 SNORA41B-201ENST00000384785 128 ntBASIC-1.73□□□□□ -2.69
CDH16O75309 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.73□□□□□ -2.69
CDH16O75309 RNU4-88P-201ENST00000411220 86 ntBASIC-1.73□□□□□ -2.69
CDH16O75309 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.73□□□□□ -2.69
CDH16O75309 MIR429-201ENST00000362106 83 ntBASIC-1.74□□□□□ -2.69
CDH16O75309 SNORD45.1-201ENST00000363181 77 ntBASIC-1.74□□□□□ -2.69
CDH16O75309 RNU6-686P-201ENST00000364839 107 ntBASIC-1.74□□□□□ -2.69
CDH16O75309 SNORD116-22-201ENST00000384430 92 ntBASIC-1.74□□□□□ -2.69
CDH16O75309 MIR548AA1-201ENST00000384971 97 ntBASIC-1.74□□□□□ -2.69
CDH16O75309 MIR4723-201ENST00000585070 81 ntBASIC-1.74□□□□□ -2.69
CDH16O75309 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.74□□□□□ -2.69
CDH16O75309 SNORD115-31-201ENST00000365318 82 ntBASIC-1.75□□□□□ -2.69
CDH16O75309 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.75□□□□□ -2.69
CDH16O75309 RNU6-267P-201ENST00000516714 103 ntBASIC-1.75□□□□□ -2.69
CDH16O75309 RNU6-980P-201ENST00000516925 103 ntBASIC-1.75□□□□□ -2.69
CDH16O75309 MIR548BB-201ENST00000626714 66 ntBASIC-1.75□□□□□ -2.69
CDH16O75309 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.76□□□□□ -2.69
CDH16O75309 SNORD1B-201ENST00000363091 84 ntBASIC-1.76□□□□□ -2.69
CDH16O75309 SNORD116-16-201ENST00000384533 92 ntBASIC-1.76□□□□□ -2.69
CDH16O75309 MIR1207-201ENST00000408249 87 ntBASIC-1.76□□□□□ -2.69
CDH16O75309 RNU6-402P-201ENST00000410678 103 ntBASIC-1.76□□□□□ -2.69
CDH16O75309 RNU6-834P-201ENST00000362367 110 ntBASIC-1.77□□□□□ -2.69
CDH16O75309 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.77□□□□□ -2.69
CDH16O75309 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.77□□□□□ -2.69
CDH16O75309 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.77□□□□□ -2.69
CDH16O75309 RNU6-209P-201ENST00000384118 107 ntBASIC-1.77□□□□□ -2.69
CDH16O75309 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.77□□□□□ -2.69
CDH16O75309 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.77□□□□□ -2.69
CDH16O75309 MALAT1.1-201ENST00000618249 95 ntBASIC-1.77□□□□□ -2.69
CDH16O75309 RNU6-81P-201ENST00000365608 104 ntBASIC-1.78□□□□□ -2.69
CDH16O75309 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.78□□□□□ -2.69
CDH16O75309 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.78□□□□□ -2.69
CDH16O75309 MIR548W-201ENST00000581970 74 ntBASIC-1.78□□□□□ -2.69
CDH16O75309 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.78□□□□□ -2.69
CDH16O75309 MIR450A1-201ENST00000362262 91 ntBASIC-1.79□□□□□ -2.7
CDH16O75309 RNU6-247P-201ENST00000362636 107 ntBASIC-1.79□□□□□ -2.7
CDH16O75309 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.79□□□□□ -2.7
CDH16O75309 AL031737.1-201ENST00000450125 223 ntBASIC-1.79□□□□□ -2.7
CDH16O75309 RNU7-151P-201ENST00000516930 53 ntBASIC-1.79□□□□□ -2.7
CDH16O75309 U6.97-201ENST00000636904 101 ntBASIC-1.79□□□□□ -2.7
CDH16O75309 RNU6-669P-201ENST00000365575 107 ntBASIC-1.8□□□□□ -2.7
CDH16O75309 RNU6-974P-201ENST00000384099 108 ntBASIC-1.8□□□□□ -2.7
CDH16O75309 RNU6-129P-201ENST00000391022 107 ntBASIC-1.8□□□□□ -2.7
CDH16O75309 AP001318.4-201ENST00000616637 121 ntBASIC-1.8□□□□□ -2.7
CDH16O75309 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.8□□□□□ -2.7
CDH16O75309 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.8□□□□□ -2.7
CDH16O75309 MIR579-201ENST00000385221 98 ntBASIC-1.81□□□□□ -2.7
CDH16O75309 RNY3P8-201ENST00000411366 126 ntBASIC-1.81□□□□□ -2.7
CDH16O75309 snoU13.10-201ENST00000459301 103 ntBASIC-1.81□□□□□ -2.7
CDH16O75309 MIR7978-201ENST00000636158 59 ntBASIC-1.81□□□□□ -2.7
CDH16O75309 SNORA27.2-201ENST00000363365 126 ntBASIC-1.82□□□□□ -2.7
CDH16O75309 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.82□□□□□ -2.7
CDH16O75309 snosnR66.1-201ENST00000391095 99 ntBASIC-1.82□□□□□ -2.7
CDH16O75309 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.82□□□□□ -2.7
CDH16O75309 SNORD63.2-201ENST00000516303 64 ntBASIC-1.82□□□□□ -2.7
CDH16O75309 MIR4484-201ENST00000582855 83 ntBASIC-1.82□□□□□ -2.7
CDH16O75309 RNA5SP215-201ENST00000363440 122 ntBASIC-1.83□□□□□ -2.7
CDH16O75309 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.83□□□□□ -2.7
CDH16O75309 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.83□□□□□ -2.7
CDH16O75309 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.83□□□□□ -2.7
CDH16O75309 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.83□□□□□ -2.7
CDH16O75309 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.83□□□□□ -2.7
CDH16O75309 MTND4LP1-201ENST00000446263 157 ntBASIC-1.83□□□□□ -2.7
CDH16O75309 SNORA40.13-201ENST00000516379 120 ntBASIC-1.83□□□□□ -2.7
CDH16O75309 MIR1297-201ENST00000637311 77 ntBASIC-1.83□□□□□ -2.7
CDH16O75309 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.84□□□□□ -2.7
CDH16O75309 SNORD113.1-201ENST00000363280 73 ntBASIC-1.84□□□□□ -2.7
CDH16O75309 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.84□□□□□ -2.7
CDH16O75309 RNA5SP405-201ENST00000363059 114 ntBASIC-1.85□□□□□ -2.71
CDH16O75309 RNU6-668P-201ENST00000364180 107 ntBASIC-1.85□□□□□ -2.71
CDH16O75309 MIR581-201ENST00000384895 96 ntBASIC-1.85□□□□□ -2.71
CDH16O75309 RNY4P18-201ENST00000391107 89 ntBASIC-1.85□□□□□ -2.71
CDH16O75309 RNU6-675P-201ENST00000384236 104 ntBASIC-1.86□□□□□ -2.71
CDH16O75309 SNORD45A-201ENST00000384512 84 ntBASIC-1.86□□□□□ -2.71
CDH16O75309 MIR125B1-201ENST00000385236 88 ntBASIC-1.86□□□□□ -2.71
CDH16O75309 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.86□□□□□ -2.71
CDH16O75309 RNU6-523P-201ENST00000516304 54 ntBASIC-1.86□□□□□ -2.71
CDH16O75309 MIR664A-201ENST00000626086 82 ntBASIC-1.86□□□□□ -2.71
CDH16O75309 RNU6-22P-201ENST00000384355 107 ntBASIC-1.87□□□□□ -2.71
CDH16O75309 MIR8053-201ENST00000613344 75 ntBASIC-1.87□□□□□ -2.71
CDH16O75309 MIR488-201ENST00000365739 83 ntBASIC-1.88□□□□□ -2.71
CDH16O75309 RNU6-995P-201ENST00000391244 107 ntBASIC-1.88□□□□□ -2.71
CDH16O75309 RNU6-172P-201ENST00000411000 93 ntBASIC-1.88□□□□□ -2.71
CDH16O75309 AC006160.2-201ENST00000637708 154 ntBASIC-1.88□□□□□ -2.71
CDH16O75309 RNU6-118P-201ENST00000516552 102 ntBASIC-1.89□□□□□ -2.71
CDH16O75309 RNU6-194P-201ENST00000363862 105 ntBASIC-1.9□□□□□ -2.71
CDH16O75309 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.91□□□□□ -2.72
CDH16O75309 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.91□□□□□ -2.72
CDH16O75309 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.91□□□□□ -2.72
CDH16O75309 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.91□□□□□ -2.72
CDH16O75309 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.91□□□□□ -2.72
CDH16O75309 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.91□□□□□ -2.72
CDH16O75309 RNU6-640P-201ENST00000363693 105 ntBASIC-1.92□□□□□ -2.72
CDH16O75309 MIR496-201ENST00000385226 102 ntBASIC-1.92□□□□□ -2.72
CDH16O75309 MIR3139-201ENST00000579145 76 ntBASIC-1.92□□□□□ -2.72
CDH16O75309 RNA5SP173-201ENST00000364857 136 ntBASIC-1.93□□□□□ -2.72
CDH16O75309 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 232.4 ms