Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 RNU6-834P-201ENST00000362367 110 ntBASIC-1.83□□□□□ -2.7
TNFRSF11BO00300 RNU6-228P-201ENST00000362700 106 ntBASIC-1.83□□□□□ -2.7
TNFRSF11BO00300 MIR548V-201ENST00000584165 80 ntBASIC-1.83□□□□□ -2.7
TNFRSF11BO00300 RNU6-81P-201ENST00000365608 104 ntBASIC-1.84□□□□□ -2.7
TNFRSF11BO00300 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.84□□□□□ -2.7
TNFRSF11BO00300 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.84□□□□□ -2.7
TNFRSF11BO00300 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.84□□□□□ -2.7
TNFRSF11BO00300 RNU6-695P-201ENST00000391157 104 ntBASIC-1.85□□□□□ -2.71
TNFRSF11BO00300 MALAT1.1-201ENST00000618249 95 ntBASIC-1.85□□□□□ -2.71
TNFRSF11BO00300 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.86□□□□□ -2.71
TNFRSF11BO00300 SNORA40.13-201ENST00000516379 120 ntBASIC-1.86□□□□□ -2.71
TNFRSF11BO00300 MIR3170-201ENST00000582699 77 ntBASIC-1.86□□□□□ -2.71
TNFRSF11BO00300 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.87□□□□□ -2.71
TNFRSF11BO00300 RNU6-497P-201ENST00000365316 104 ntBASIC-1.87□□□□□ -2.71
TNFRSF11BO00300 RNU6-129P-201ENST00000391022 107 ntBASIC-1.87□□□□□ -2.71
TNFRSF11BO00300 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.87□□□□□ -2.71
TNFRSF11BO00300 MTND4LP1-201ENST00000446263 157 ntBASIC-1.87□□□□□ -2.71
TNFRSF11BO00300 AC108019.1-201ENST00000512540 175 ntBASIC-1.87□□□□□ -2.71
TNFRSF11BO00300 MIR4484-201ENST00000582855 83 ntBASIC-1.87□□□□□ -2.71
TNFRSF11BO00300 AP001318.4-201ENST00000616637 121 ntBASIC-1.87□□□□□ -2.71
TNFRSF11BO00300 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.88□□□□□ -2.71
TNFRSF11BO00300 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.88□□□□□ -2.71
TNFRSF11BO00300 SNORD116-16-201ENST00000384533 92 ntBASIC-1.88□□□□□ -2.71
TNFRSF11BO00300 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.88□□□□□ -2.71
TNFRSF11BO00300 AC120024.2-201ENST00000576526 175 ntBASIC-1.88□□□□□ -2.71
TNFRSF11BO00300 RNY4P7-201ENST00000364600 96 ntBASIC-1.89□□□□□ -2.71
TNFRSF11BO00300 RNU6-563P-201ENST00000364872 108 ntBASIC-1.89□□□□□ -2.71
TNFRSF11BO00300 MIR630-201ENST00000384957 97 ntBASIC-1.89□□□□□ -2.71
TNFRSF11BO00300 MIR548AA1-201ENST00000384971 97 ntBASIC-1.89□□□□□ -2.71
TNFRSF11BO00300 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.89□□□□□ -2.71
TNFRSF11BO00300 RNU6-247P-201ENST00000362636 107 ntBASIC-1.9□□□□□ -2.71
TNFRSF11BO00300 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.9□□□□□ -2.71
TNFRSF11BO00300 RNU6-118P-201ENST00000516552 102 ntBASIC-1.9□□□□□ -2.71
TNFRSF11BO00300 RNA5SP215-201ENST00000363440 122 ntBASIC-1.91□□□□□ -2.72
TNFRSF11BO00300 RNU6-22P-201ENST00000384355 107 ntBASIC-1.91□□□□□ -2.72
TNFRSF11BO00300 SNORD113-2-201ENST00000391082 72 ntBASIC-1.91□□□□□ -2.72
TNFRSF11BO00300 SNORD54-201ENST00000459159 67 ntBASIC-1.91□□□□□ -2.72
TNFRSF11BO00300 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.91□□□□□ -2.72
TNFRSF11BO00300 MIR1297-201ENST00000637311 77 ntBASIC-1.91□□□□□ -2.72
TNFRSF11BO00300 SNORD1B-201ENST00000363091 84 ntBASIC-1.92□□□□□ -2.72
TNFRSF11BO00300 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.92□□□□□ -2.72
TNFRSF11BO00300 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.92□□□□□ -2.72
TNFRSF11BO00300 MIR4756-201ENST00000577874 78 ntBASIC-1.92□□□□□ -2.72
TNFRSF11BO00300 RNU6-668P-201ENST00000364180 107 ntBASIC-1.93□□□□□ -2.72
TNFRSF11BO00300 RNA5SP173-201ENST00000364857 136 ntBASIC-1.93□□□□□ -2.72
TNFRSF11BO00300 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.93□□□□□ -2.72
TNFRSF11BO00300 MIR3123-201ENST00000583417 75 ntBASIC-1.93□□□□□ -2.72
TNFRSF11BO00300 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.93□□□□□ -2.72
TNFRSF11BO00300 RNU6-841P-201ENST00000383872 107 ntBASIC-1.94□□□□□ -2.72
TNFRSF11BO00300 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.94□□□□□ -2.72
TNFRSF11BO00300 RNU6-258P-201ENST00000390884 101 ntBASIC-1.94□□□□□ -2.72
TNFRSF11BO00300 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.94□□□□□ -2.72
TNFRSF11BO00300 RNU6-380P-201ENST00000410207 107 ntBASIC-1.94□□□□□ -2.72
TNFRSF11BO00300 MIR8053-201ENST00000613344 75 ntBASIC-1.94□□□□□ -2.72
TNFRSF11BO00300 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.94□□□□□ -2.72
TNFRSF11BO00300 MIR664B-201ENST00000626756 61 ntBASIC-1.94□□□□□ -2.72
TNFRSF11BO00300 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.95□□□□□ -2.72
TNFRSF11BO00300 RNU6-980P-201ENST00000516925 103 ntBASIC-1.95□□□□□ -2.72
TNFRSF11BO00300 AC006160.2-201ENST00000637708 154 ntBASIC-1.95□□□□□ -2.72
TNFRSF11BO00300 SNORD113.1-201ENST00000363280 73 ntBASIC-1.96□□□□□ -2.72
TNFRSF11BO00300 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.96□□□□□ -2.72
TNFRSF11BO00300 SNORA41B-201ENST00000384785 128 ntBASIC-1.96□□□□□ -2.72
TNFRSF11BO00300 RNY4P18-201ENST00000391107 89 ntBASIC-1.96□□□□□ -2.72
TNFRSF11BO00300 RNU6-995P-201ENST00000391244 107 ntBASIC-1.97□□□□□ -2.72
TNFRSF11BO00300 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.97□□□□□ -2.72
TNFRSF11BO00300 MIR488-201ENST00000365739 83 ntBASIC-1.98□□□□□ -2.73
TNFRSF11BO00300 SNORD45A-201ENST00000384512 84 ntBASIC-1.98□□□□□ -2.73
TNFRSF11BO00300 RNU6-313P-201ENST00000516317 112 ntBASIC-1.98□□□□□ -2.73
TNFRSF11BO00300 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.98□□□□□ -2.73
TNFRSF11BO00300 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.99□□□□□ -2.73
TNFRSF11BO00300 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.99□□□□□ -2.73
TNFRSF11BO00300 RNU6-675P-201ENST00000384236 104 ntBASIC-1.99□□□□□ -2.73
TNFRSF11BO00300 MIR3668-201ENST00000582138 75 ntBASIC-1.99□□□□□ -2.73
TNFRSF11BO00300 SNORA63.4-201ENST00000362763 126 ntBASIC-2□□□□□ -2.73
TNFRSF11BO00300 MIR548AM-201ENST00000584298 74 ntBASIC-2□□□□□ -2.73
TNFRSF11BO00300 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.01□□□□□ -2.73
TNFRSF11BO00300 RNU7-151P-201ENST00000516930 53 ntBASIC-2.01□□□□□ -2.73
TNFRSF11BO00300 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.01□□□□□ -2.73
TNFRSF11BO00300 RNA5SP93-201ENST00000362525 114 ntBASIC-2.02□□□□□ -2.73
TNFRSF11BO00300 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.02□□□□□ -2.73
TNFRSF11BO00300 SNORD63.2-201ENST00000516303 64 ntBASIC-2.02□□□□□ -2.73
TNFRSF11BO00300 RNU6-844P-201ENST00000517175 102 ntBASIC-2.02□□□□□ -2.73
TNFRSF11BO00300 MIR664A-201ENST00000626086 82 ntBASIC-2.02□□□□□ -2.73
TNFRSF11BO00300 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.03□□□□□ -2.73
TNFRSF11BO00300 SNORA27.2-201ENST00000363365 126 ntBASIC-2.03□□□□□ -2.73
TNFRSF11BO00300 MIR3671-201ENST00000580455 88 ntBASIC-2.03□□□□□ -2.73
TNFRSF11BO00300 RNU6-640P-201ENST00000363693 105 ntBASIC-2.04□□□□□ -2.74
TNFRSF11BO00300 RNU6-755P-201ENST00000364400 103 ntBASIC-2.04□□□□□ -2.74
TNFRSF11BO00300 RNU6-669P-201ENST00000365575 107 ntBASIC-2.04□□□□□ -2.74
TNFRSF11BO00300 MIR579-201ENST00000385221 98 ntBASIC-2.04□□□□□ -2.74
TNFRSF11BO00300 MIR548M-201ENST00000408260 86 ntBASIC-2.04□□□□□ -2.74
TNFRSF11BO00300 RNU6-172P-201ENST00000411000 93 ntBASIC-2.04□□□□□ -2.74
TNFRSF11BO00300 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.04□□□□□ -2.74
TNFRSF11BO00300 RNU6-32P-201ENST00000383948 107 ntBASIC-2.05□□□□□ -2.74
TNFRSF11BO00300 RNU6-13P-201ENST00000384248 107 ntBASIC-2.05□□□□□ -2.74
TNFRSF11BO00300 RNU6-12P-201ENST00000384604 107 ntBASIC-2.05□□□□□ -2.74
TNFRSF11BO00300 RNU6-41P-201ENST00000384741 107 ntBASIC-2.05□□□□□ -2.74
TNFRSF11BO00300 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.05□□□□□ -2.74
TNFRSF11BO00300 AC005520.4-201ENST00000604337 90 ntBASIC-2.05□□□□□ -2.74
TNFRSF11BO00300 AC013734.1-201ENST00000619329 111 ntBASIC-2.05□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms