Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RNU6-12P-201ENST00000384604 107 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 RNU6-41P-201ENST00000384741 107 ntBASIC-1.06□□□□□ -2.58
CCDC188H7C350 RNU6-645P-201ENST00000364649 106 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 RNU6-497P-201ENST00000365316 104 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 RNU6-168P-201ENST00000516189 101 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 RNU6-557P-201ENST00000516842 110 ntBASIC-1.07□□□□□ -2.58
CCDC188H7C350 RNU6-330P-201ENST00000363015 107 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 RNU6-686P-201ENST00000364839 107 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 RNU6-147P-201ENST00000383983 107 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 MIR548C-201ENST00000384815 97 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 AL603908.1-201ENST00000406098 201 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 RNU6-303P-201ENST00000517091 106 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 AP002795.1-201ENST00000534879 84 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 MIR3675-201ENST00000583661 73 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.08□□□□□ -2.58
CCDC188H7C350 RNU6-640P-201ENST00000363693 105 ntBASIC-1.09□□□□□ -2.58
CCDC188H7C350 SNORD20-201ENST00000384550 80 ntBASIC-1.09□□□□□ -2.58
CCDC188H7C350 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.09□□□□□ -2.58
CCDC188H7C350 MIR548AM-201ENST00000584298 74 ntBASIC-1.09□□□□□ -2.58
CCDC188H7C350 U2.7-201ENST00000619197 100 ntBASIC-1.09□□□□□ -2.58
CCDC188H7C350 RNU6-79P-201ENST00000362511 107 ntBASIC-1.1□□□□□ -2.59
CCDC188H7C350 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.1□□□□□ -2.59
CCDC188H7C350 AC090616.4-201ENST00000448026 115 ntBASIC-1.1□□□□□ -2.59
CCDC188H7C350 RNU6-919P-201ENST00000516731 104 ntBASIC-1.1□□□□□ -2.59
CCDC188H7C350 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.11□□□□□ -2.59
CCDC188H7C350 RNU6-215P-201ENST00000365169 102 ntBASIC-1.11□□□□□ -2.59
CCDC188H7C350 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.11□□□□□ -2.59
CCDC188H7C350 RNU6-129P-201ENST00000391022 107 ntBASIC-1.11□□□□□ -2.59
CCDC188H7C350 SNORA26.4-201ENST00000391188 123 ntBASIC-1.11□□□□□ -2.59
CCDC188H7C350 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 RNU6-478P-201ENST00000363904 110 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 SNORA8.1-201ENST00000384250 140 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 RPL35AP4-201ENST00000412007 102 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 RNU6-807P-201ENST00000516805 107 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 MIR548AG1-201ENST00000579932 66 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.12□□□□□ -2.59
CCDC188H7C350 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.13□□□□□ -2.59
CCDC188H7C350 RNU6-230P-201ENST00000362457 104 ntBASIC-1.13□□□□□ -2.59
CCDC188H7C350 RNU6-400P-201ENST00000391173 106 ntBASIC-1.13□□□□□ -2.59
CCDC188H7C350 RNU6-789P-201ENST00000517105 102 ntBASIC-1.13□□□□□ -2.59
CCDC188H7C350 RNU6-844P-201ENST00000517175 102 ntBASIC-1.13□□□□□ -2.59
CCDC188H7C350 RNU6-675P-201ENST00000384236 104 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
CCDC188H7C350 RNU6-604P-201ENST00000390917 100 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 RNU6-695P-201ENST00000391157 104 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 AC074348.1-201ENST00000426503 132 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 MIR4748-201ENST00000578076 82 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 MIR3123-201ENST00000583417 75 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 AC006160.2-201ENST00000637708 154 ntBASIC-1.14□□□□□ -2.59
CCDC188H7C350 SNORD45.1-201ENST00000363181 77 ntBASIC-1.15□□□□□ -2.59
CCDC188H7C350 RNU6-841P-201ENST00000383872 107 ntBASIC-1.15□□□□□ -2.59
CCDC188H7C350 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.15□□□□□ -2.59
CCDC188H7C350 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.16□□□□□ -2.6
CCDC188H7C350 RNU7-88P-201ENST00000458752 63 ntBASIC-1.16□□□□□ -2.6
CCDC188H7C350 RNU6-803P-201ENST00000516034 102 ntBASIC-1.16□□□□□ -2.6
CCDC188H7C350 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.16□□□□□ -2.6
CCDC188H7C350 MIR4484-201ENST00000582855 83 ntBASIC-1.16□□□□□ -2.6
CCDC188H7C350 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.17□□□□□ -2.6
CCDC188H7C350 SNORD115-31-201ENST00000365318 82 ntBASIC-1.17□□□□□ -2.6
CCDC188H7C350 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.17□□□□□ -2.6
CCDC188H7C350 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.17□□□□□ -2.6
CCDC188H7C350 RNU6-982P-201ENST00000516216 102 ntBASIC-1.17□□□□□ -2.6
CCDC188H7C350 U7.5-201ENST00000517224 61 ntBASIC-1.17□□□□□ -2.6
CCDC188H7C350 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.18□□□□□ -2.6
CCDC188H7C350 RNU6-246P-201ENST00000384702 107 ntBASIC-1.18□□□□□ -2.6
CCDC188H7C350 MIR466-201ENST00000580653 84 ntBASIC-1.18□□□□□ -2.6
CCDC188H7C350 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.18□□□□□ -2.6
CCDC188H7C350 RNU6-44P-201ENST00000384045 107 ntBASIC-1.19□□□□□ -2.6
CCDC188H7C350 SNORD19-201ENST00000391191 68 ntBASIC-1.19□□□□□ -2.6
CCDC188H7C350 AL353691.2-201ENST00000443795 59 ntBASIC-1.19□□□□□ -2.6
CCDC188H7C350 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.19□□□□□ -2.6
CCDC188H7C350 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.19□□□□□ -2.6
CCDC188H7C350 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.2□□□□□ -2.6
CCDC188H7C350 RNU6-380P-201ENST00000410207 107 ntBASIC-1.2□□□□□ -2.6
CCDC188H7C350 AC018880.2-201ENST00000414265 201 ntBASIC-1.2□□□□□ -2.6
CCDC188H7C350 RNU7-174P-201ENST00000516248 59 ntBASIC-1.2□□□□□ -2.6
CCDC188H7C350 IGLL4P-201ENST00000614590 133 ntBASIC-1.2□□□□□ -2.6
CCDC188H7C350 MIR1297-201ENST00000637311 77 ntBASIC-1.2□□□□□ -2.6
CCDC188H7C350 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.21□□□□□ -2.6
CCDC188H7C350 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.21□□□□□ -2.6
CCDC188H7C350 MIR548W-201ENST00000581970 74 ntBASIC-1.21□□□□□ -2.6
CCDC188H7C350 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.22□□□□□ -2.6
CCDC188H7C350 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
CCDC188H7C350 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.22□□□□□ -2.6
CCDC188H7C350 RNU6-406P-201ENST00000516470 107 ntBASIC-1.22□□□□□ -2.6
CCDC188H7C350 MIR548AI-201ENST00000579940 88 ntBASIC-1.22□□□□□ -2.6
CCDC188H7C350 RNY1P1-201ENST00000364372 112 ntBASIC-1.23□□□□□ -2.61
CCDC188H7C350 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.23□□□□□ -2.61
CCDC188H7C350 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.23□□□□□ -2.61
CCDC188H7C350 RNU6-49P-201ENST00000384256 107 ntBASIC-1.23□□□□□ -2.61
CCDC188H7C350 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.23□□□□□ -2.61
CCDC188H7C350 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.24□□□□□ -2.61
CCDC188H7C350 RNU6-563P-201ENST00000364872 108 ntBASIC-1.24□□□□□ -2.61
CCDC188H7C350 RNU6-458P-201ENST00000384179 107 ntBASIC-1.24□□□□□ -2.61
CCDC188H7C350 RNA5SP89-201ENST00000410300 108 ntBASIC-1.24□□□□□ -2.61
CCDC188H7C350 snoU13.10-201ENST00000459301 103 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms