Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 MIR3139-201ENST00000579145 76 ntBASIC-0.65□□□□□ -2.51
COL6A6A6NMZ7 MIR548AM-201ENST00000584298 74 ntBASIC-0.65□□□□□ -2.51
COL6A6A6NMZ7 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.66□□□□□ -2.51
COL6A6A6NMZ7 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.66□□□□□ -2.51
COL6A6A6NMZ7 RNU4-88P-201ENST00000411220 86 ntBASIC-0.66□□□□□ -2.51
COL6A6A6NMZ7 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.66□□□□□ -2.51
COL6A6A6NMZ7 MTND4LP1-201ENST00000446263 157 ntBASIC-0.66□□□□□ -2.51
COL6A6A6NMZ7 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.66□□□□□ -2.51
COL6A6A6NMZ7 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.66□□□□□ -2.51
COL6A6A6NMZ7 MIR1297-201ENST00000637311 77 ntBASIC-0.66□□□□□ -2.51
COL6A6A6NMZ7 RNA5SP405-201ENST00000363059 114 ntBASIC-0.66□□□□□ -2.52
COL6A6A6NMZ7 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.66□□□□□ -2.52
COL6A6A6NMZ7 MIR548C-201ENST00000384815 97 ntBASIC-0.66□□□□□ -2.52
COL6A6A6NMZ7 MIR630-201ENST00000384957 97 ntBASIC-0.66□□□□□ -2.52
COL6A6A6NMZ7 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.66□□□□□ -2.52
COL6A6A6NMZ7 AL606753.1-201ENST00000427435 87 ntBASIC-0.66□□□□□ -2.52
COL6A6A6NMZ7 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.66□□□□□ -2.52
COL6A6A6NMZ7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.66□□□□□ -2.52
COL6A6A6NMZ7 RNU6-633P-201ENST00000362612 103 ntBASIC-0.67□□□□□ -2.52
COL6A6A6NMZ7 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.67□□□□□ -2.52
COL6A6A6NMZ7 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.67□□□□□ -2.52
COL6A6A6NMZ7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
COL6A6A6NMZ7 RNU6-129P-201ENST00000391022 107 ntBASIC-0.67□□□□□ -2.52
COL6A6A6NMZ7 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.67□□□□□ -2.52
COL6A6A6NMZ7 RNU6-118P-201ENST00000516552 102 ntBASIC-0.67□□□□□ -2.52
COL6A6A6NMZ7 U6.81-201ENST00000612550 106 ntBASIC-0.67□□□□□ -2.52
COL6A6A6NMZ7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.67□□□□□ -2.52
COL6A6A6NMZ7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
COL6A6A6NMZ7 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.67□□□□□ -2.52
COL6A6A6NMZ7 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.68□□□□□ -2.52
COL6A6A6NMZ7 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.68□□□□□ -2.52
COL6A6A6NMZ7 RNU6-698P-201ENST00000363523 107 ntBASIC-0.68□□□□□ -2.52
COL6A6A6NMZ7 RNU6-645P-201ENST00000364649 106 ntBASIC-0.68□□□□□ -2.52
COL6A6A6NMZ7 RNU6-34P-201ENST00000364874 107 ntBASIC-0.68□□□□□ -2.52
COL6A6A6NMZ7 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.68□□□□□ -2.52
COL6A6A6NMZ7 SNORA41B-201ENST00000384785 128 ntBASIC-0.68□□□□□ -2.52
COL6A6A6NMZ7 AL450471.1-201ENST00000447509 127 ntBASIC-0.68□□□□□ -2.52
COL6A6A6NMZ7 RNU7-151P-201ENST00000516930 53 ntBASIC-0.68□□□□□ -2.52
COL6A6A6NMZ7 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.68□□□□□ -2.52
COL6A6A6NMZ7 RNU6-979P-201ENST00000383896 107 ntBASIC-0.69□□□□□ -2.52
COL6A6A6NMZ7 RNU6-649P-201ENST00000384463 107 ntBASIC-0.69□□□□□ -2.52
COL6A6A6NMZ7 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.69□□□□□ -2.52
COL6A6A6NMZ7 U6.97-201ENST00000636904 101 ntBASIC-0.69□□□□□ -2.52
COL6A6A6NMZ7 MIR450A1-201ENST00000362262 91 ntBASIC-0.69□□□□□ -2.52
COL6A6A6NMZ7 RNU6-974P-201ENST00000384099 108 ntBASIC-0.69□□□□□ -2.52
COL6A6A6NMZ7 MIR548W-201ENST00000581970 74 ntBASIC-0.69□□□□□ -2.52
COL6A6A6NMZ7 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.7□□□□□ -2.52
COL6A6A6NMZ7 RNU6-841P-201ENST00000383872 107 ntBASIC-0.7□□□□□ -2.52
COL6A6A6NMZ7 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.7□□□□□ -2.52
COL6A6A6NMZ7 MIR125B1-201ENST00000385236 88 ntBASIC-0.7□□□□□ -2.52
COL6A6A6NMZ7 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.71□□□□□ -2.52
COL6A6A6NMZ7 MIR548AA1-201ENST00000384971 97 ntBASIC-0.71□□□□□ -2.52
COL6A6A6NMZ7 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.71□□□□□ -2.52
COL6A6A6NMZ7 MIR466-201ENST00000580653 84 ntBASIC-0.71□□□□□ -2.52
COL6A6A6NMZ7 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.71□□□□□ -2.52
COL6A6A6NMZ7 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.71□□□□□ -2.52
COL6A6A6NMZ7 RNU6-557P-201ENST00000516842 110 ntBASIC-0.71□□□□□ -2.52
COL6A6A6NMZ7 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.72□□□□□ -2.52
COL6A6A6NMZ7 RNU6-330P-201ENST00000363015 107 ntBASIC-0.72□□□□□ -2.52
COL6A6A6NMZ7 RNU6-755P-201ENST00000364400 103 ntBASIC-0.72□□□□□ -2.52
COL6A6A6NMZ7 MIR581-201ENST00000384895 96 ntBASIC-0.72□□□□□ -2.52
COL6A6A6NMZ7 MT-TM-201ENST00000387377 68 ntBASIC-0.72□□□□□ -2.52
COL6A6A6NMZ7 SNORD113-2-201ENST00000391082 72 ntBASIC-0.72□□□□□ -2.52
COL6A6A6NMZ7 MIR3910-1-201ENST00000580936 111 ntBASIC-0.72□□□□□ -2.52
COL6A6A6NMZ7 AL365222.1-201ENST00000614661 98 ntBASIC-0.72□□□□□ -2.52
COL6A6A6NMZ7 FTX_4.1-201ENST00000616291 147 ntBASIC-0.72□□□□□ -2.52
COL6A6A6NMZ7 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.72□□□□□ -2.53
COL6A6A6NMZ7 SNORD63.2-201ENST00000516303 64 ntBASIC-0.72□□□□□ -2.53
COL6A6A6NMZ7 MIR8053-201ENST00000613344 75 ntBASIC-0.72□□□□□ -2.53
COL6A6A6NMZ7 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.72□□□□□ -2.53
COL6A6A6NMZ7 RNU6-247P-201ENST00000362636 107 ntBASIC-0.73□□□□□ -2.53
COL6A6A6NMZ7 RNU6-686P-201ENST00000364839 107 ntBASIC-0.73□□□□□ -2.53
COL6A6A6NMZ7 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.73□□□□□ -2.53
COL6A6A6NMZ7 MIR548N-201ENST00000408742 75 ntBASIC-0.73□□□□□ -2.53
COL6A6A6NMZ7 RNY4P30-201ENST00000410216 95 ntBASIC-0.73□□□□□ -2.53
COL6A6A6NMZ7 AC074348.1-201ENST00000426503 132 ntBASIC-0.73□□□□□ -2.53
COL6A6A6NMZ7 SNORD113.1-201ENST00000363280 73 ntBASIC-0.73□□□□□ -2.53
COL6A6A6NMZ7 MIR579-201ENST00000385221 98 ntBASIC-0.73□□□□□ -2.53
COL6A6A6NMZ7 AC093729.1-201ENST00000513074 128 ntBASIC-0.73□□□□□ -2.53
COL6A6A6NMZ7 MIR548V-201ENST00000584165 80 ntBASIC-0.73□□□□□ -2.53
COL6A6A6NMZ7 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.73□□□□□ -2.53
COL6A6A6NMZ7 MIR379-201ENST00000362218 67 ntBASIC-0.74□□□□□ -2.53
COL6A6A6NMZ7 SNORD45A-201ENST00000384512 84 ntBASIC-0.74□□□□□ -2.53
COL6A6A6NMZ7 SNORD116-16-201ENST00000384533 92 ntBASIC-0.74□□□□□ -2.53
COL6A6A6NMZ7 RNU6-523P-201ENST00000516304 54 ntBASIC-0.74□□□□□ -2.53
COL6A6A6NMZ7 MIR664A-201ENST00000626086 82 ntBASIC-0.74□□□□□ -2.53
COL6A6A6NMZ7 SNORD18C-201ENST00000362704 69 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 SNORA63.4-201ENST00000362763 126 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 RNU6-194P-201ENST00000363862 105 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 MIR154-201ENST00000385243 84 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 RNU6-995P-201ENST00000391244 107 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 MIR1302-5-201ENST00000408164 150 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.75□□□□□ -2.53
COL6A6A6NMZ7 RNU6-598P-201ENST00000364017 105 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 322.2 ms