Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 SNORA40.13-201ENST00000516379 120 ntBASIC-1.02□□□□□ -2.57
ATG4BQ9Y4P1 MIR548AG1-201ENST00000579932 66 ntBASIC-1.02□□□□□ -2.57
ATG4BQ9Y4P1 AC138207.3-201ENST00000585289 166 ntBASIC-1.02□□□□□ -2.57
ATG4BQ9Y4P1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
ATG4BQ9Y4P1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.02□□□□□ -2.57
ATG4BQ9Y4P1 MIR507-201ENST00000385234 94 ntBASIC-1.03□□□□□ -2.57
ATG4BQ9Y4P1 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.03□□□□□ -2.57
ATG4BQ9Y4P1 SNORD19-201ENST00000391191 68 ntBASIC-1.04□□□□□ -2.58
ATG4BQ9Y4P1 MIR4723-201ENST00000585070 81 ntBASIC-1.04□□□□□ -2.58
ATG4BQ9Y4P1 AP001318.4-201ENST00000616637 121 ntBASIC-1.04□□□□□ -2.58
ATG4BQ9Y4P1 RNU6-924P-201ENST00000362926 108 ntBASIC-1.05□□□□□ -2.58
ATG4BQ9Y4P1 SNORD116-22-201ENST00000384430 92 ntBASIC-1.05□□□□□ -2.58
ATG4BQ9Y4P1 RPL35AP4-201ENST00000412007 102 ntBASIC-1.05□□□□□ -2.58
ATG4BQ9Y4P1 AL035461.1-201ENST00000421490 332 ntBASIC-1.05□□□□□ -2.58
ATG4BQ9Y4P1 MALAT1.1-201ENST00000618249 95 ntBASIC-1.05□□□□□ -2.58
ATG4BQ9Y4P1 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.06□□□□□ -2.58
ATG4BQ9Y4P1 AL606753.1-201ENST00000427435 87 ntBASIC-1.06□□□□□ -2.58
ATG4BQ9Y4P1 MIR6739-201ENST00000622461 75 ntBASIC-1.06□□□□□ -2.58
ATG4BQ9Y4P1 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.07□□□□□ -2.58
ATG4BQ9Y4P1 RNU6-164P-201ENST00000364604 103 ntBASIC-1.07□□□□□ -2.58
ATG4BQ9Y4P1 MIR519A2-201ENST00000384990 87 ntBASIC-1.07□□□□□ -2.58
ATG4BQ9Y4P1 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.07□□□□□ -2.58
ATG4BQ9Y4P1 AC093729.1-201ENST00000513074 128 ntBASIC-1.07□□□□□ -2.58
ATG4BQ9Y4P1 MIR4770-201ENST00000579149 58 ntBASIC-1.07□□□□□ -2.58
ATG4BQ9Y4P1 MIR365A-201ENST00000362260 87 ntBASIC-1.08□□□□□ -2.58
ATG4BQ9Y4P1 RNA5SP86-201ENST00000390869 98 ntBASIC-1.08□□□□□ -2.58
ATG4BQ9Y4P1 MIR1285-2-201ENST00000408311 88 ntBASIC-1.08□□□□□ -2.58
ATG4BQ9Y4P1 RNU6-402P-201ENST00000410678 103 ntBASIC-1.08□□□□□ -2.58
ATG4BQ9Y4P1 AC090616.4-201ENST00000448026 115 ntBASIC-1.08□□□□□ -2.58
ATG4BQ9Y4P1 SNORA63.4-201ENST00000362763 126 ntBASIC-1.09□□□□□ -2.58
ATG4BQ9Y4P1 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.09□□□□□ -2.58
ATG4BQ9Y4P1 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.09□□□□□ -2.58
ATG4BQ9Y4P1 AL353691.2-201ENST00000443795 59 ntBASIC-1.09□□□□□ -2.58
ATG4BQ9Y4P1 RNU7-88P-201ENST00000458752 63 ntBASIC-1.09□□□□□ -2.58
ATG4BQ9Y4P1 RNU6-732P-201ENST00000516033 103 ntBASIC-1.09□□□□□ -2.58
ATG4BQ9Y4P1 RNU6-518P-201ENST00000516056 96 ntBASIC-1.09□□□□□ -2.58
ATG4BQ9Y4P1 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.09□□□□□ -2.58
ATG4BQ9Y4P1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.09□□□□□ -2.58
ATG4BQ9Y4P1 SNORD113-1-201ENST00000365321 69 ntBASIC-1.1□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-246P-201ENST00000384702 107 ntBASIC-1.1□□□□□ -2.59
ATG4BQ9Y4P1 MIR487B-201ENST00000385021 84 ntBASIC-1.1□□□□□ -2.59
ATG4BQ9Y4P1 U7.5-201ENST00000517224 61 ntBASIC-1.1□□□□□ -2.59
ATG4BQ9Y4P1 MIR4441-201ENST00000582623 100 ntBASIC-1.1□□□□□ -2.59
ATG4BQ9Y4P1 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.11□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-540P-201ENST00000384622 101 ntBASIC-1.11□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-168P-201ENST00000516189 101 ntBASIC-1.11□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-267P-201ENST00000516714 103 ntBASIC-1.11□□□□□ -2.59
ATG4BQ9Y4P1 MIR5683-201ENST00000636514 76 ntBASIC-1.11□□□□□ -2.59
ATG4BQ9Y4P1 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.12□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-755P-201ENST00000364400 103 ntBASIC-1.12□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-219P-201ENST00000364728 107 ntBASIC-1.12□□□□□ -2.59
ATG4BQ9Y4P1 SNORD114-3-201ENST00000364969 75 ntBASIC-1.12□□□□□ -2.59
ATG4BQ9Y4P1 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.12□□□□□ -2.59
ATG4BQ9Y4P1 AL603908.1-201ENST00000406098 201 ntBASIC-1.12□□□□□ -2.59
ATG4BQ9Y4P1 RNU7-154P-201ENST00000516194 62 ntBASIC-1.12□□□□□ -2.59
ATG4BQ9Y4P1 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.12□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-624P-201ENST00000363411 107 ntBASIC-1.13□□□□□ -2.59
ATG4BQ9Y4P1 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.13□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-32P-201ENST00000383948 107 ntBASIC-1.13□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-13P-201ENST00000384248 107 ntBASIC-1.13□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-12P-201ENST00000384604 107 ntBASIC-1.13□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-41P-201ENST00000384741 107 ntBASIC-1.13□□□□□ -2.59
ATG4BQ9Y4P1 MIR548BB-201ENST00000626714 66 ntBASIC-1.13□□□□□ -2.59
ATG4BQ9Y4P1 MIR548H1-201ENST00000408610 102 ntBASIC-1.14□□□□□ -2.59
ATG4BQ9Y4P1 MIR1246-201ENST00000636535 73 ntBASIC-1.14□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.15□□□□□ -2.59
ATG4BQ9Y4P1 MIR1207-201ENST00000408249 87 ntBASIC-1.15□□□□□ -2.59
ATG4BQ9Y4P1 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.15□□□□□ -2.59
ATG4BQ9Y4P1 AL021921.1-201ENST00000442774 93 ntBASIC-1.15□□□□□ -2.59
ATG4BQ9Y4P1 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.15□□□□□ -2.59
ATG4BQ9Y4P1 MIR488-201ENST00000365739 83 ntBASIC-1.16□□□□□ -2.6
ATG4BQ9Y4P1 MIR548C-201ENST00000384815 97 ntBASIC-1.16□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-656P-201ENST00000516785 107 ntBASIC-1.16□□□□□ -2.6
ATG4BQ9Y4P1 RNY4P27-201ENST00000363341 96 ntBASIC-1.17□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-147P-201ENST00000383983 107 ntBASIC-1.17□□□□□ -2.6
ATG4BQ9Y4P1 MIR4490-201ENST00000582647 84 ntBASIC-1.17□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-79P-201ENST00000362511 107 ntBASIC-1.18□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-228P-201ENST00000362700 106 ntBASIC-1.18□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-640P-201ENST00000363693 105 ntBASIC-1.18□□□□□ -2.6
ATG4BQ9Y4P1 SNORD18.1-201ENST00000363807 70 ntBASIC-1.18□□□□□ -2.6
ATG4BQ9Y4P1 SNORD20-201ENST00000384550 80 ntBASIC-1.18□□□□□ -2.6
ATG4BQ9Y4P1 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.18□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-478P-201ENST00000363904 110 ntBASIC-1.19□□□□□ -2.6
ATG4BQ9Y4P1 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.19□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-645P-201ENST00000364649 106 ntBASIC-1.19□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-608P-201ENST00000383927 104 ntBASIC-1.19□□□□□ -2.6
ATG4BQ9Y4P1 MIR520D-201ENST00000385002 87 ntBASIC-1.19□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-919P-201ENST00000516731 104 ntBASIC-1.19□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-303P-201ENST00000517091 106 ntBASIC-1.19□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-330P-201ENST00000363015 107 ntBASIC-1.2□□□□□ -2.6
ATG4BQ9Y4P1 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.2□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-215P-201ENST00000365169 102 ntBASIC-1.2□□□□□ -2.6
ATG4BQ9Y4P1 SNORA8.1-201ENST00000384250 140 ntBASIC-1.2□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-557P-201ENST00000516842 110 ntBASIC-1.2□□□□□ -2.6
ATG4BQ9Y4P1 MIR3675-201ENST00000583661 73 ntBASIC-1.2□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-686P-201ENST00000364839 107 ntBASIC-1.21□□□□□ -2.6
ATG4BQ9Y4P1 MIR548Q-201ENST00000408404 100 ntBASIC-1.21□□□□□ -2.6
ATG4BQ9Y4P1 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.21□□□□□ -2.6
ATG4BQ9Y4P1 AC018880.2-201ENST00000414265 201 ntBASIC-1.21□□□□□ -2.6
ATG4BQ9Y4P1 RNU6-789P-201ENST00000517105 102 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms