Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RNA5SP25-201ENST00000410815 110 ntBASIC-0.68□□□□□ -2.52
DDX56Q9NY93 RNU6-518P-201ENST00000516056 96 ntBASIC-0.68□□□□□ -2.52
DDX56Q9NY93 MIR6086-201ENST00000638065 55 ntBASIC-0.68□□□□□ -2.52
DDX56Q9NY93 SNORD115-22-201ENST00000364456 82 ntBASIC-0.69□□□□□ -2.52
DDX56Q9NY93 MIR518B-201ENST00000385127 83 ntBASIC-0.69□□□□□ -2.52
DDX56Q9NY93 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.69□□□□□ -2.52
DDX56Q9NY93 U2.7-201ENST00000619197 100 ntBASIC-0.69□□□□□ -2.52
DDX56Q9NY93 RNA5SP368-201ENST00000364298 116 ntBASIC-0.7□□□□□ -2.52
DDX56Q9NY93 MIR548C-201ENST00000384815 97 ntBASIC-0.7□□□□□ -2.52
DDX56Q9NY93 MIR224-201ENST00000384889 81 ntBASIC-0.7□□□□□ -2.52
DDX56Q9NY93 AL021921.1-201ENST00000442774 93 ntBASIC-0.71□□□□□ -2.52
DDX56Q9NY93 RNU6-70P-201ENST00000516438 60 ntBASIC-0.72□□□□□ -2.52
DDX56Q9NY93 MIR4464-201ENST00000580818 92 ntBASIC-0.72□□□□□ -2.52
DDX56Q9NY93 MIR8053-201ENST00000613344 75 ntBASIC-0.72□□□□□ -2.52
DDX56Q9NY93 MIR124-2-201ENST00000385081 109 ntBASIC-0.73□□□□□ -2.53
DDX56Q9NY93 RNU7-154P-201ENST00000516194 62 ntBASIC-0.73□□□□□ -2.53
DDX56Q9NY93 SNORD22.1-201ENST00000516331 125 ntBASIC-0.73□□□□□ -2.53
DDX56Q9NY93 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.73□□□□□ -2.53
DDX56Q9NY93 SNORD95.1-201ENST00000364099 68 ntBASIC-0.74□□□□□ -2.53
DDX56Q9NY93 MIR6888-201ENST00000621977 67 ntBASIC-0.74□□□□□ -2.53
DDX56Q9NY93 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.74□□□□□ -2.53
DDX56Q9NY93 MIR3202-2-201ENST00000635980 79 ntBASIC-0.74□□□□□ -2.53
DDX56Q9NY93 MIR4679-1-201ENST00000637619 75 ntBASIC-0.74□□□□□ -2.53
DDX56Q9NY93 SNORD113.1-201ENST00000363280 73 ntBASIC-0.75□□□□□ -2.53
DDX56Q9NY93 SNORD74.6-201ENST00000364796 70 ntBASIC-0.75□□□□□ -2.53
DDX56Q9NY93 SNORD45A-201ENST00000384512 84 ntBASIC-0.75□□□□□ -2.53
DDX56Q9NY93 SNORA13-201ENST00000458790 133 ntBASIC-0.75□□□□□ -2.53
DDX56Q9NY93 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 MIR3179-1-201ENST00000578940 84 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 MIR3179-2-201ENST00000579107 84 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 MIR3179-3-201ENST00000579566 84 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 MIR3681-201ENST00000580089 72 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 AL445584.3-201ENST00000617173 78 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 MIR3179-4-201ENST00000617599 84 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 SNORD114-15-201ENST00000364687 72 ntBASIC-0.77□□□□□ -2.53
DDX56Q9NY93 SNORA3B-201ENST00000391305 131 ntBASIC-0.77□□□□□ -2.53
DDX56Q9NY93 MTND4LP1-201ENST00000446263 157 ntBASIC-0.77□□□□□ -2.53
DDX56Q9NY93 RNA5SP476-201ENST00000516613 103 ntBASIC-0.77□□□□□ -2.53
DDX56Q9NY93 MIR3134-201ENST00000579433 74 ntBASIC-0.77□□□□□ -2.53
DDX56Q9NY93 MIR4436A-201ENST00000585278 85 ntBASIC-0.77□□□□□ -2.53
DDX56Q9NY93 SNORD114-14-201ENST00000362723 75 ntBASIC-0.78□□□□□ -2.53
DDX56Q9NY93 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.78□□□□□ -2.53
DDX56Q9NY93 RNU4-63P-201ENST00000411313 118 ntBASIC-0.78□□□□□ -2.53
DDX56Q9NY93 AC021146.6-201ENST00000514659 117 ntBASIC-0.78□□□□□ -2.53
DDX56Q9NY93 MIR1302-4-201ENST00000408701 150 ntBASIC-0.79□□□□□ -2.54
DDX56Q9NY93 RNU6-228P-201ENST00000362700 106 ntBASIC-0.8□□□□□ -2.54
DDX56Q9NY93 MIR1255A-201ENST00000408338 113 ntBASIC-0.8□□□□□ -2.54
DDX56Q9NY93 RNU6-721P-201ENST00000410155 105 ntBASIC-0.8□□□□□ -2.54
DDX56Q9NY93 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.8□□□□□ -2.54
DDX56Q9NY93 SNORD18.2-201ENST00000459604 70 ntBASIC-0.8□□□□□ -2.54
DDX56Q9NY93 MIR154-201ENST00000385243 84 ntBASIC-0.81□□□□□ -2.54
DDX56Q9NY93 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.81□□□□□ -2.54
DDX56Q9NY93 RNU6-668P-201ENST00000364180 107 ntBASIC-0.82□□□□□ -2.54
DDX56Q9NY93 MIR517B-201ENST00000385102 67 ntBASIC-0.82□□□□□ -2.54
DDX56Q9NY93 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.82□□□□□ -2.54
DDX56Q9NY93 AP000533.3-201ENST00000447704 118 ntBASIC-0.82□□□□□ -2.54
DDX56Q9NY93 RNU7-174P-201ENST00000516248 59 ntBASIC-0.82□□□□□ -2.54
DDX56Q9NY93 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.83□□□□□ -2.54
DDX56Q9NY93 RNU6-587P-201ENST00000391282 106 ntBASIC-0.83□□□□□ -2.54
DDX56Q9NY93 MIR548AG1-201ENST00000579932 66 ntBASIC-0.83□□□□□ -2.54
DDX56Q9NY93 U7.4-201ENST00000614961 63 ntBASIC-0.83□□□□□ -2.54
DDX56Q9NY93 snoU13.19-201ENST00000459148 104 ntBASIC-0.84□□□□□ -2.54
DDX56Q9NY93 MT-TQ-201ENST00000387372 72 ntBASIC-0.85□□□□□ -2.55
DDX56Q9NY93 HAR1A.1-201ENST00000459583 118 ntBASIC-0.85□□□□□ -2.55
DDX56Q9NY93 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.86□□□□□ -2.55
DDX56Q9NY93 RNU6-687P-201ENST00000516443 89 ntBASIC-0.86□□□□□ -2.55
DDX56Q9NY93 RNU6-924P-201ENST00000362926 108 ntBASIC-0.87□□□□□ -2.55
DDX56Q9NY93 RNU6-895P-201ENST00000384125 103 ntBASIC-0.87□□□□□ -2.55
DDX56Q9NY93 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.87□□□□□ -2.55
DDX56Q9NY93 SNORD78.1-201ENST00000390866 65 ntBASIC-0.87□□□□□ -2.55
DDX56Q9NY93 MIR548V-201ENST00000584165 80 ntBASIC-0.87□□□□□ -2.55
DDX56Q9NY93 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.88□□□□□ -2.55
DDX56Q9NY93 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.88□□□□□ -2.55
DDX56Q9NY93 SNORD115-31-201ENST00000365318 82 ntBASIC-0.88□□□□□ -2.55
DDX56Q9NY93 RNU6-411P-201ENST00000384451 107 ntBASIC-0.88□□□□□ -2.55
DDX56Q9NY93 RNU6-857P-201ENST00000515893 110 ntBASIC-0.88□□□□□ -2.55
DDX56Q9NY93 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.89□□□□□ -2.55
DDX56Q9NY93 RNU6-279P-201ENST00000391297 101 ntBASIC-0.9□□□□□ -2.55
DDX56Q9NY93 RNA5SP215-201ENST00000363440 122 ntBASIC-0.91□□□□□ -2.56
DDX56Q9NY93 RNU6-698P-201ENST00000363523 107 ntBASIC-0.91□□□□□ -2.56
DDX56Q9NY93 RNU6-34P-201ENST00000364874 107 ntBASIC-0.91□□□□□ -2.56
DDX56Q9NY93 RNU6-24P-201ENST00000384440 107 ntBASIC-0.91□□□□□ -2.56
DDX56Q9NY93 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 SNORD116-24-201ENST00000384549 92 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 RNU6-30P-201ENST00000384561 107 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 MIR630-201ENST00000384957 97 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.93□□□□□ -2.56
DDX56Q9NY93 RNA5SP225-201ENST00000410874 135 ntBASIC-0.94□□□□□ -2.56
DDX56Q9NY93 U4.4-201ENST00000620626 117 ntBASIC-0.94□□□□□ -2.56
DDX56Q9NY93 MIR548AX-201ENST00000580117 73 ntBASIC-0.95□□□□□ -2.56
DDX56Q9NY93 SNORD114-17-201ENST00000364699 75 ntBASIC-0.96□□□□□ -2.56
DDX56Q9NY93 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.96□□□□□ -2.56
DDX56Q9NY93 RNU6-246P-201ENST00000384702 107 ntBASIC-0.97□□□□□ -2.56
DDX56Q9NY93 MIR527-201ENST00000385244 85 ntBASIC-0.98□□□□□ -2.57
DDX56Q9NY93 MIR196A1-201ENST00000388006 70 ntBASIC-0.98□□□□□ -2.57
DDX56Q9NY93 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms