Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RNA5SP25-201ENST00000410815 110 ntBASIC-0.68□□□□□ -2.52
DDX56Q9NY93 RNU6-518P-201ENST00000516056 96 ntBASIC-0.68□□□□□ -2.52
DDX56Q9NY93 MIR6086-201ENST00000638065 55 ntBASIC-0.68□□□□□ -2.52
DDX56Q9NY93 SNORD115-22-201ENST00000364456 82 ntBASIC-0.69□□□□□ -2.52
DDX56Q9NY93 MIR518B-201ENST00000385127 83 ntBASIC-0.69□□□□□ -2.52
DDX56Q9NY93 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.69□□□□□ -2.52
DDX56Q9NY93 U2.7-201ENST00000619197 100 ntBASIC-0.69□□□□□ -2.52
DDX56Q9NY93 RNA5SP368-201ENST00000364298 116 ntBASIC-0.7□□□□□ -2.52
DDX56Q9NY93 MIR548C-201ENST00000384815 97 ntBASIC-0.7□□□□□ -2.52
DDX56Q9NY93 MIR224-201ENST00000384889 81 ntBASIC-0.7□□□□□ -2.52
DDX56Q9NY93 AL021921.1-201ENST00000442774 93 ntBASIC-0.71□□□□□ -2.52
DDX56Q9NY93 RNU6-70P-201ENST00000516438 60 ntBASIC-0.72□□□□□ -2.52
DDX56Q9NY93 MIR4464-201ENST00000580818 92 ntBASIC-0.72□□□□□ -2.52
DDX56Q9NY93 MIR8053-201ENST00000613344 75 ntBASIC-0.72□□□□□ -2.52
DDX56Q9NY93 MIR124-2-201ENST00000385081 109 ntBASIC-0.73□□□□□ -2.53
DDX56Q9NY93 RNU7-154P-201ENST00000516194 62 ntBASIC-0.73□□□□□ -2.53
DDX56Q9NY93 SNORD22.1-201ENST00000516331 125 ntBASIC-0.73□□□□□ -2.53
DDX56Q9NY93 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.73□□□□□ -2.53
DDX56Q9NY93 SNORD95.1-201ENST00000364099 68 ntBASIC-0.74□□□□□ -2.53
DDX56Q9NY93 MIR6888-201ENST00000621977 67 ntBASIC-0.74□□□□□ -2.53
DDX56Q9NY93 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.74□□□□□ -2.53
DDX56Q9NY93 MIR3202-2-201ENST00000635980 79 ntBASIC-0.74□□□□□ -2.53
DDX56Q9NY93 MIR4679-1-201ENST00000637619 75 ntBASIC-0.74□□□□□ -2.53
DDX56Q9NY93 SNORD113.1-201ENST00000363280 73 ntBASIC-0.75□□□□□ -2.53
DDX56Q9NY93 SNORD74.6-201ENST00000364796 70 ntBASIC-0.75□□□□□ -2.53
DDX56Q9NY93 SNORD45A-201ENST00000384512 84 ntBASIC-0.75□□□□□ -2.53
DDX56Q9NY93 SNORA13-201ENST00000458790 133 ntBASIC-0.75□□□□□ -2.53
DDX56Q9NY93 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 MIR3179-1-201ENST00000578940 84 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 MIR3179-2-201ENST00000579107 84 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 MIR3179-3-201ENST00000579566 84 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 MIR3681-201ENST00000580089 72 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 AL445584.3-201ENST00000617173 78 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 MIR3179-4-201ENST00000617599 84 ntBASIC-0.76□□□□□ -2.53
DDX56Q9NY93 SNORD114-15-201ENST00000364687 72 ntBASIC-0.77□□□□□ -2.53
DDX56Q9NY93 SNORA3B-201ENST00000391305 131 ntBASIC-0.77□□□□□ -2.53
DDX56Q9NY93 MTND4LP1-201ENST00000446263 157 ntBASIC-0.77□□□□□ -2.53
DDX56Q9NY93 RNA5SP476-201ENST00000516613 103 ntBASIC-0.77□□□□□ -2.53
DDX56Q9NY93 MIR3134-201ENST00000579433 74 ntBASIC-0.77□□□□□ -2.53
DDX56Q9NY93 MIR4436A-201ENST00000585278 85 ntBASIC-0.77□□□□□ -2.53
DDX56Q9NY93 SNORD114-14-201ENST00000362723 75 ntBASIC-0.78□□□□□ -2.53
DDX56Q9NY93 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.78□□□□□ -2.53
DDX56Q9NY93 RNU4-63P-201ENST00000411313 118 ntBASIC-0.78□□□□□ -2.53
DDX56Q9NY93 AC021146.6-201ENST00000514659 117 ntBASIC-0.78□□□□□ -2.53
DDX56Q9NY93 MIR1302-4-201ENST00000408701 150 ntBASIC-0.79□□□□□ -2.54
DDX56Q9NY93 RNU6-228P-201ENST00000362700 106 ntBASIC-0.8□□□□□ -2.54
DDX56Q9NY93 MIR1255A-201ENST00000408338 113 ntBASIC-0.8□□□□□ -2.54
DDX56Q9NY93 RNU6-721P-201ENST00000410155 105 ntBASIC-0.8□□□□□ -2.54
DDX56Q9NY93 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.8□□□□□ -2.54
DDX56Q9NY93 SNORD18.2-201ENST00000459604 70 ntBASIC-0.8□□□□□ -2.54
DDX56Q9NY93 MIR154-201ENST00000385243 84 ntBASIC-0.81□□□□□ -2.54
DDX56Q9NY93 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.81□□□□□ -2.54
DDX56Q9NY93 RNU6-668P-201ENST00000364180 107 ntBASIC-0.82□□□□□ -2.54
DDX56Q9NY93 MIR517B-201ENST00000385102 67 ntBASIC-0.82□□□□□ -2.54
DDX56Q9NY93 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.82□□□□□ -2.54
DDX56Q9NY93 AP000533.3-201ENST00000447704 118 ntBASIC-0.82□□□□□ -2.54
DDX56Q9NY93 RNU7-174P-201ENST00000516248 59 ntBASIC-0.82□□□□□ -2.54
DDX56Q9NY93 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.83□□□□□ -2.54
DDX56Q9NY93 RNU6-587P-201ENST00000391282 106 ntBASIC-0.83□□□□□ -2.54
DDX56Q9NY93 MIR548AG1-201ENST00000579932 66 ntBASIC-0.83□□□□□ -2.54
DDX56Q9NY93 U7.4-201ENST00000614961 63 ntBASIC-0.83□□□□□ -2.54
DDX56Q9NY93 snoU13.19-201ENST00000459148 104 ntBASIC-0.84□□□□□ -2.54
DDX56Q9NY93 MT-TQ-201ENST00000387372 72 ntBASIC-0.85□□□□□ -2.55
DDX56Q9NY93 HAR1A.1-201ENST00000459583 118 ntBASIC-0.85□□□□□ -2.55
DDX56Q9NY93 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.86□□□□□ -2.55
DDX56Q9NY93 RNU6-687P-201ENST00000516443 89 ntBASIC-0.86□□□□□ -2.55
DDX56Q9NY93 RNU6-924P-201ENST00000362926 108 ntBASIC-0.87□□□□□ -2.55
DDX56Q9NY93 RNU6-895P-201ENST00000384125 103 ntBASIC-0.87□□□□□ -2.55
DDX56Q9NY93 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.87□□□□□ -2.55
DDX56Q9NY93 SNORD78.1-201ENST00000390866 65 ntBASIC-0.87□□□□□ -2.55
DDX56Q9NY93 MIR548V-201ENST00000584165 80 ntBASIC-0.87□□□□□ -2.55
DDX56Q9NY93 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.88□□□□□ -2.55
DDX56Q9NY93 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.88□□□□□ -2.55
DDX56Q9NY93 SNORD115-31-201ENST00000365318 82 ntBASIC-0.88□□□□□ -2.55
DDX56Q9NY93 RNU6-411P-201ENST00000384451 107 ntBASIC-0.88□□□□□ -2.55
DDX56Q9NY93 RNU6-857P-201ENST00000515893 110 ntBASIC-0.88□□□□□ -2.55
DDX56Q9NY93 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.89□□□□□ -2.55
DDX56Q9NY93 RNU6-279P-201ENST00000391297 101 ntBASIC-0.9□□□□□ -2.55
DDX56Q9NY93 RNA5SP215-201ENST00000363440 122 ntBASIC-0.91□□□□□ -2.56
DDX56Q9NY93 RNU6-698P-201ENST00000363523 107 ntBASIC-0.91□□□□□ -2.56
DDX56Q9NY93 RNU6-34P-201ENST00000364874 107 ntBASIC-0.91□□□□□ -2.56
DDX56Q9NY93 RNU6-24P-201ENST00000384440 107 ntBASIC-0.91□□□□□ -2.56
DDX56Q9NY93 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 SNORD116-24-201ENST00000384549 92 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 RNU6-30P-201ENST00000384561 107 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 MIR630-201ENST00000384957 97 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.93□□□□□ -2.56
DDX56Q9NY93 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.93□□□□□ -2.56
DDX56Q9NY93 RNA5SP225-201ENST00000410874 135 ntBASIC-0.94□□□□□ -2.56
DDX56Q9NY93 U4.4-201ENST00000620626 117 ntBASIC-0.94□□□□□ -2.56
DDX56Q9NY93 MIR548AX-201ENST00000580117 73 ntBASIC-0.95□□□□□ -2.56
DDX56Q9NY93 SNORD114-17-201ENST00000364699 75 ntBASIC-0.96□□□□□ -2.56
DDX56Q9NY93 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.96□□□□□ -2.56
DDX56Q9NY93 RNU6-246P-201ENST00000384702 107 ntBASIC-0.97□□□□□ -2.56
DDX56Q9NY93 MIR527-201ENST00000385244 85 ntBASIC-0.98□□□□□ -2.57
DDX56Q9NY93 MIR196A1-201ENST00000388006 70 ntBASIC-0.98□□□□□ -2.57
DDX56Q9NY93 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms