Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RNU6-982P-201ENST00000516216 102 ntBASIC-1.9□□□□□ -2.71
CISHQ9NSE2 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.9□□□□□ -2.71
CISHQ9NSE2 SNORA40-201ENST00000388090 126 ntBASIC-1.91□□□□□ -2.72
CISHQ9NSE2 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.91□□□□□ -2.72
CISHQ9NSE2 RNU6-162P-201ENST00000516228 103 ntBASIC-1.91□□□□□ -2.72
CISHQ9NSE2 RNU6-118P-201ENST00000516552 102 ntBASIC-1.91□□□□□ -2.72
CISHQ9NSE2 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.91□□□□□ -2.72
CISHQ9NSE2 U7.3-201ENST00000616123 62 ntBASIC-1.91□□□□□ -2.72
CISHQ9NSE2 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.91□□□□□ -2.72
CISHQ9NSE2 U6.95-201ENST00000636931 70 ntBASIC-1.91□□□□□ -2.72
CISHQ9NSE2 RNU6-624P-201ENST00000363411 107 ntBASIC-1.92□□□□□ -2.72
CISHQ9NSE2 MIR590-201ENST00000385008 97 ntBASIC-1.92□□□□□ -2.72
CISHQ9NSE2 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.92□□□□□ -2.72
CISHQ9NSE2 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.92□□□□□ -2.72
CISHQ9NSE2 MIR4503-201ENST00000582187 83 ntBASIC-1.92□□□□□ -2.72
CISHQ9NSE2 MIR3675-201ENST00000583661 73 ntBASIC-1.92□□□□□ -2.72
CISHQ9NSE2 MIR548V-201ENST00000584165 80 ntBASIC-1.92□□□□□ -2.72
CISHQ9NSE2 RNU6-604P-201ENST00000390917 100 ntBASIC-1.93□□□□□ -2.72
CISHQ9NSE2 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.93□□□□□ -2.72
CISHQ9NSE2 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.93□□□□□ -2.72
CISHQ9NSE2 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.93□□□□□ -2.72
CISHQ9NSE2 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.93□□□□□ -2.72
CISHQ9NSE2 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.93□□□□□ -2.72
CISHQ9NSE2 MIR548AA1-201ENST00000384971 97 ntBASIC-1.94□□□□□ -2.72
CISHQ9NSE2 MIR496-201ENST00000385226 102 ntBASIC-1.94□□□□□ -2.72
CISHQ9NSE2 MIR1207-201ENST00000408249 87 ntBASIC-1.94□□□□□ -2.72
CISHQ9NSE2 RNU6-797P-201ENST00000363101 109 ntBASIC-1.95□□□□□ -2.72
CISHQ9NSE2 RNU6-867P-201ENST00000364956 107 ntBASIC-1.95□□□□□ -2.72
CISHQ9NSE2 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.95□□□□□ -2.72
CISHQ9NSE2 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.95□□□□□ -2.72
CISHQ9NSE2 MTATP8P2-201ENST00000435212 202 ntBASIC-1.95□□□□□ -2.72
CISHQ9NSE2 RNU6-659P-201ENST00000516454 104 ntBASIC-1.95□□□□□ -2.72
CISHQ9NSE2 RNU6-971P-201ENST00000516920 106 ntBASIC-1.95□□□□□ -2.72
CISHQ9NSE2 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.96□□□□□ -2.72
CISHQ9NSE2 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.96□□□□□ -2.72
CISHQ9NSE2 SNORD116-16-201ENST00000384533 92 ntBASIC-1.96□□□□□ -2.72
CISHQ9NSE2 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.96□□□□□ -2.72
CISHQ9NSE2 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.96□□□□□ -2.72
CISHQ9NSE2 SNORA8.1-201ENST00000384250 140 ntBASIC-1.97□□□□□ -2.72
CISHQ9NSE2 SNORD113-2-201ENST00000391082 72 ntBASIC-1.97□□□□□ -2.72
CISHQ9NSE2 RNU4-88P-201ENST00000411220 86 ntBASIC-1.97□□□□□ -2.72
CISHQ9NSE2 AC074348.1-201ENST00000426503 132 ntBASIC-1.97□□□□□ -2.72
CISHQ9NSE2 RNU6-980P-201ENST00000516925 103 ntBASIC-1.97□□□□□ -2.72
CISHQ9NSE2 RNU6-303P-201ENST00000517091 106 ntBASIC-1.97□□□□□ -2.72
CISHQ9NSE2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.97□□□□□ -2.72
CISHQ9NSE2 RNU6-633P-201ENST00000362612 103 ntBASIC-1.98□□□□□ -2.73
CISHQ9NSE2 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.98□□□□□ -2.73
CISHQ9NSE2 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.98□□□□□ -2.73
CISHQ9NSE2 RNU6-109P-201ENST00000516364 107 ntBASIC-1.98□□□□□ -2.73
CISHQ9NSE2 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.98□□□□□ -2.73
CISHQ9NSE2 RNU6-184P-201ENST00000516514 107 ntBASIC-1.98□□□□□ -2.73
CISHQ9NSE2 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.98□□□□□ -2.73
CISHQ9NSE2 AC013734.1-201ENST00000619329 111 ntBASIC-1.98□□□□□ -2.73
CISHQ9NSE2 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.98□□□□□ -2.73
CISHQ9NSE2 RNU6-766P-201ENST00000362478 107 ntBASIC-1.99□□□□□ -2.73
CISHQ9NSE2 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.99□□□□□ -2.73
CISHQ9NSE2 RNU6-119P-201ENST00000364882 107 ntBASIC-1.99□□□□□ -2.73
CISHQ9NSE2 SNORD116-21-201ENST00000384507 92 ntBASIC-1.99□□□□□ -2.73
CISHQ9NSE2 MIR630-201ENST00000384957 97 ntBASIC-1.99□□□□□ -2.73
CISHQ9NSE2 AC005520.4-201ENST00000604337 90 ntBASIC-1.99□□□□□ -2.73
CISHQ9NSE2 AL353621.2-201ENST00000605340 133 ntBASIC-1.99□□□□□ -2.73
CISHQ9NSE2 SNORD1B-201ENST00000363091 84 ntBASIC-2□□□□□ -2.73
CISHQ9NSE2 SNORD45.1-201ENST00000363181 77 ntBASIC-2□□□□□ -2.73
CISHQ9NSE2 RNU6-379P-201ENST00000363813 104 ntBASIC-2□□□□□ -2.73
CISHQ9NSE2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2□□□□□ -2.73
CISHQ9NSE2 RNU6-557P-201ENST00000516842 110 ntBASIC-2□□□□□ -2.73
CISHQ9NSE2 RNU6-182P-201ENST00000516970 105 ntBASIC-2□□□□□ -2.73
CISHQ9NSE2 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2□□□□□ -2.73
CISHQ9NSE2 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2□□□□□ -2.73
CISHQ9NSE2 RNU6-247P-201ENST00000362636 107 ntBASIC-2.01□□□□□ -2.73
CISHQ9NSE2 SNORD115-37-201ENST00000363768 82 ntBASIC-2.01□□□□□ -2.73
CISHQ9NSE2 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.01□□□□□ -2.73
CISHQ9NSE2 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.01□□□□□ -2.73
CISHQ9NSE2 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.01□□□□□ -2.73
CISHQ9NSE2 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.01□□□□□ -2.73
CISHQ9NSE2 SNORA41B-201ENST00000384785 128 ntBASIC-2.01□□□□□ -2.73
CISHQ9NSE2 RNU7-200P-201ENST00000516105 62 ntBASIC-2.01□□□□□ -2.73
CISHQ9NSE2 MIR4723-201ENST00000585070 81 ntBASIC-2.01□□□□□ -2.73
CISHQ9NSE2 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.01□□□□□ -2.73
CISHQ9NSE2 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.01□□□□□ -2.73
CISHQ9NSE2 SNORA63-201ENST00000363450 132 ntBASIC-2.02□□□□□ -2.73
CISHQ9NSE2 MIR1302-5-201ENST00000408164 150 ntBASIC-2.02□□□□□ -2.73
CISHQ9NSE2 AC093729.1-201ENST00000513074 128 ntBASIC-2.02□□□□□ -2.73
CISHQ9NSE2 SNORA27.2-201ENST00000363365 126 ntBASIC-2.03□□□□□ -2.73
CISHQ9NSE2 RNU6-196P-201ENST00000384315 107 ntBASIC-2.03□□□□□ -2.73
CISHQ9NSE2 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.03□□□□□ -2.73
CISHQ9NSE2 MIR3139-201ENST00000579145 76 ntBASIC-2.03□□□□□ -2.73
CISHQ9NSE2 MIR4668-201ENST00000582284 70 ntBASIC-2.03□□□□□ -2.73
CISHQ9NSE2 RNA5SP215-201ENST00000363440 122 ntBASIC-2.04□□□□□ -2.74
CISHQ9NSE2 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.04□□□□□ -2.74
CISHQ9NSE2 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.04□□□□□ -2.74
CISHQ9NSE2 RNU6-886P-201ENST00000384319 105 ntBASIC-2.04□□□□□ -2.74
CISHQ9NSE2 RNU6-327P-201ENST00000516270 127 ntBASIC-2.04□□□□□ -2.74
CISHQ9NSE2 MIR548W-201ENST00000581970 74 ntBASIC-2.04□□□□□ -2.74
CISHQ9NSE2 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.05□□□□□ -2.74
CISHQ9NSE2 RNU6-686P-201ENST00000364839 107 ntBASIC-2.05□□□□□ -2.74
CISHQ9NSE2 RNU6-497P-201ENST00000365316 104 ntBASIC-2.05□□□□□ -2.74
CISHQ9NSE2 SNORD115-31-201ENST00000365318 82 ntBASIC-2.05□□□□□ -2.74
CISHQ9NSE2 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.05□□□□□ -2.74
CISHQ9NSE2 RNU6-554P-201ENST00000410466 106 ntBASIC-2.05□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms