Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 MIR3179-4-201ENST00000617599 84 ntBASIC-0.72□□□□□ -2.52
USP44Q9H0E7 MIR409-201ENST00000362237 79 ntBASIC-0.73□□□□□ -2.53
USP44Q9H0E7 MIR519A2-201ENST00000384990 87 ntBASIC-0.73□□□□□ -2.53
USP44Q9H0E7 MIR196A1-201ENST00000388006 70 ntBASIC-0.73□□□□□ -2.53
USP44Q9H0E7 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
USP44Q9H0E7 AC021146.6-201ENST00000514659 117 ntBASIC-0.73□□□□□ -2.53
USP44Q9H0E7 SNORD45.1-201ENST00000363181 77 ntBASIC-0.74□□□□□ -2.53
USP44Q9H0E7 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.74□□□□□ -2.53
USP44Q9H0E7 RNU6-242P-201ENST00000384359 107 ntBASIC-0.74□□□□□ -2.53
USP44Q9H0E7 RNU6-604P-201ENST00000390917 100 ntBASIC-0.74□□□□□ -2.53
USP44Q9H0E7 AL500527.2-201ENST00000454105 95 ntBASIC-0.74□□□□□ -2.53
USP44Q9H0E7 RNU6-518P-201ENST00000516056 96 ntBASIC-0.74□□□□□ -2.53
USP44Q9H0E7 RNA5SP170-201ENST00000517150 101 ntBASIC-0.74□□□□□ -2.53
USP44Q9H0E7 MIR6888-201ENST00000621977 67 ntBASIC-0.74□□□□□ -2.53
USP44Q9H0E7 MIR124-2-201ENST00000385081 109 ntBASIC-0.75□□□□□ -2.53
USP44Q9H0E7 SNORD57-201ENST00000448188 72 ntBASIC-0.75□□□□□ -2.53
USP44Q9H0E7 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.75□□□□□ -2.53
USP44Q9H0E7 RNU7-154P-201ENST00000516194 62 ntBASIC-0.75□□□□□ -2.53
USP44Q9H0E7 RNU6-881P-201ENST00000516813 102 ntBASIC-0.75□□□□□ -2.53
USP44Q9H0E7 AL445584.3-201ENST00000617173 78 ntBASIC-0.75□□□□□ -2.53
USP44Q9H0E7 MIR1245B-201ENST00000636115 69 ntBASIC-0.75□□□□□ -2.53
USP44Q9H0E7 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.76□□□□□ -2.53
USP44Q9H0E7 MIR4712-201ENST00000583750 82 ntBASIC-0.76□□□□□ -2.53
USP44Q9H0E7 U2.7-201ENST00000619197 100 ntBASIC-0.76□□□□□ -2.53
USP44Q9H0E7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.76□□□□□ -2.53
USP44Q9H0E7 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.77□□□□□ -2.53
USP44Q9H0E7 RNU6-820P-201ENST00000384273 107 ntBASIC-0.77□□□□□ -2.53
USP44Q9H0E7 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.77□□□□□ -2.53
USP44Q9H0E7 AL021921.1-201ENST00000442774 93 ntBASIC-0.77□□□□□ -2.53
USP44Q9H0E7 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.77□□□□□ -2.53
USP44Q9H0E7 AC062037.1-201ENST00000605302 128 ntBASIC-0.77□□□□□ -2.53
USP44Q9H0E7 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.78□□□□□ -2.53
USP44Q9H0E7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
USP44Q9H0E7 AP000533.3-201ENST00000447704 118 ntBASIC-0.78□□□□□ -2.53
USP44Q9H0E7 RNU6-982P-201ENST00000516216 102 ntBASIC-0.78□□□□□ -2.53
USP44Q9H0E7 MIR4666B-201ENST00000578142 81 ntBASIC-0.78□□□□□ -2.53
USP44Q9H0E7 SNORD114-25-201ENST00000363742 72 ntBASIC-0.79□□□□□ -2.54
USP44Q9H0E7 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.79□□□□□ -2.54
USP44Q9H0E7 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.79□□□□□ -2.54
USP44Q9H0E7 RNA5SP331-201ENST00000364986 107 ntBASIC-0.79□□□□□ -2.54
USP44Q9H0E7 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.79□□□□□ -2.54
USP44Q9H0E7 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.8□□□□□ -2.54
USP44Q9H0E7 SCARNA18B-201ENST00000458806 135 ntBASIC-0.8□□□□□ -2.54
USP44Q9H0E7 SNORD18.2-201ENST00000459604 70 ntBASIC-0.8□□□□□ -2.54
USP44Q9H0E7 MIR664A-201ENST00000626086 82 ntBASIC-0.8□□□□□ -2.54
USP44Q9H0E7 SNORD115-22-201ENST00000364456 82 ntBASIC-0.81□□□□□ -2.54
USP44Q9H0E7 RNU6-787P-201ENST00000384032 107 ntBASIC-0.81□□□□□ -2.54
USP44Q9H0E7 MIR517B-201ENST00000385102 67 ntBASIC-0.81□□□□□ -2.54
USP44Q9H0E7 RNY1P9-201ENST00000532431 109 ntBASIC-0.81□□□□□ -2.54
USP44Q9H0E7 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.82□□□□□ -2.54
USP44Q9H0E7 SCARNA17-201ENST00000516183 144 ntBASIC-0.82□□□□□ -2.54
USP44Q9H0E7 MIR548C-201ENST00000384815 97 ntBASIC-0.83□□□□□ -2.54
USP44Q9H0E7 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.83□□□□□ -2.54
USP44Q9H0E7 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.84□□□□□ -2.54
USP44Q9H0E7 RNA5SP266-201ENST00000410273 108 ntBASIC-0.84□□□□□ -2.54
USP44Q9H0E7 MIR8053-201ENST00000613344 75 ntBASIC-0.84□□□□□ -2.54
USP44Q9H0E7 SNORD73B-201ENST00000364394 72 ntBASIC-0.85□□□□□ -2.55
USP44Q9H0E7 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.85□□□□□ -2.55
USP44Q9H0E7 MIR548AG1-201ENST00000579932 66 ntBASIC-0.85□□□□□ -2.55
USP44Q9H0E7 SNORD83B-201ENST00000386745 93 ntBASIC-0.86□□□□□ -2.55
USP44Q9H0E7 RNU6-924P-201ENST00000362926 108 ntBASIC-0.87□□□□□ -2.55
USP44Q9H0E7 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.87□□□□□ -2.55
USP44Q9H0E7 RNU7-174P-201ENST00000516248 59 ntBASIC-0.87□□□□□ -2.55
USP44Q9H0E7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.87□□□□□ -2.55
USP44Q9H0E7 MIR4499-201ENST00000584834 69 ntBASIC-0.87□□□□□ -2.55
USP44Q9H0E7 SNORD113.1-201ENST00000363280 73 ntBASIC-0.88□□□□□ -2.55
USP44Q9H0E7 RNU6-431P-201ENST00000383874 107 ntBASIC-0.88□□□□□ -2.55
USP44Q9H0E7 SNORD45A-201ENST00000384512 84 ntBASIC-0.88□□□□□ -2.55
USP44Q9H0E7 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.89□□□□□ -2.55
USP44Q9H0E7 MTND4LP1-201ENST00000446263 157 ntBASIC-0.89□□□□□ -2.55
USP44Q9H0E7 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.89□□□□□ -2.55
USP44Q9H0E7 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.9□□□□□ -2.55
USP44Q9H0E7 SNORD64-201ENST00000386683 67 ntBASIC-0.9□□□□□ -2.55
USP44Q9H0E7 RNU6-70P-201ENST00000516438 60 ntBASIC-0.9□□□□□ -2.55
USP44Q9H0E7 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.91□□□□□ -2.56
USP44Q9H0E7 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.91□□□□□ -2.56
USP44Q9H0E7 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.91□□□□□ -2.56
USP44Q9H0E7 MIR4324-201ENST00000584846 72 ntBASIC-0.91□□□□□ -2.56
USP44Q9H0E7 SNORD114-17-201ENST00000364699 75 ntBASIC-0.92□□□□□ -2.56
USP44Q9H0E7 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.92□□□□□ -2.56
USP44Q9H0E7 MIR587-201ENST00000384845 96 ntBASIC-0.92□□□□□ -2.56
USP44Q9H0E7 MIR378F-201ENST00000578143 78 ntBASIC-0.92□□□□□ -2.56
USP44Q9H0E7 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.92□□□□□ -2.56
USP44Q9H0E7 MIR6738-201ENST00000619620 64 ntBASIC-0.92□□□□□ -2.56
USP44Q9H0E7 RNU6-668P-201ENST00000364180 107 ntBASIC-0.93□□□□□ -2.56
USP44Q9H0E7 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.93□□□□□ -2.56
USP44Q9H0E7 uc_338.19-201ENST00000616808 99 ntBASIC-0.93□□□□□ -2.56
USP44Q9H0E7 MIR147A-201ENST00000385079 72 ntBASIC-0.94□□□□□ -2.56
USP44Q9H0E7 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.94□□□□□ -2.56
USP44Q9H0E7 RNY4P29-201ENST00000410801 97 ntBASIC-0.94□□□□□ -2.56
USP44Q9H0E7 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.94□□□□□ -2.56
USP44Q9H0E7 MIR3134-201ENST00000579433 74 ntBASIC-0.94□□□□□ -2.56
USP44Q9H0E7 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.95□□□□□ -2.56
USP44Q9H0E7 RNU6-10P-201ENST00000384036 107 ntBASIC-0.95□□□□□ -2.56
USP44Q9H0E7 RNU6-246P-201ENST00000384702 107 ntBASIC-0.95□□□□□ -2.56
USP44Q9H0E7 SNORA26.2-201ENST00000390922 122 ntBASIC-0.95□□□□□ -2.56
USP44Q9H0E7 MIR382-201ENST00000637119 76 ntBASIC-0.95□□□□□ -2.56
USP44Q9H0E7 RNU6-698P-201ENST00000363523 107 ntBASIC-0.96□□□□□ -2.56
USP44Q9H0E7 RNU6-34P-201ENST00000364874 107 ntBASIC-0.96□□□□□ -2.56
USP44Q9H0E7 RNU6-573P-201ENST00000383938 106 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms