Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.5□□□□□ -2.65
SHANK3Q9BYB0 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.5□□□□□ -2.65
SHANK3Q9BYB0 MIR6502-201ENST00000617296 76 ntBASIC-1.5□□□□□ -2.65
SHANK3Q9BYB0 MIR548Q-201ENST00000408404 100 ntBASIC-1.51□□□□□ -2.65
SHANK3Q9BYB0 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.51□□□□□ -2.65
SHANK3Q9BYB0 AC091912.2-201ENST00000624798 167 ntBASIC-1.51□□□□□ -2.65
SHANK3Q9BYB0 RNU6-633P-201ENST00000362612 103 ntBASIC-1.52□□□□□ -2.65
SHANK3Q9BYB0 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.52□□□□□ -2.65
SHANK3Q9BYB0 RNU6-106P-201ENST00000384405 107 ntBASIC-1.52□□□□□ -2.65
SHANK3Q9BYB0 SNORD116-14-201ENST00000383894 92 ntBASIC-1.52□□□□□ -2.65
SHANK3Q9BYB0 SNORD116-17-201ENST00000383929 92 ntBASIC-1.52□□□□□ -2.65
SHANK3Q9BYB0 SNORD116-15-201ENST00000384445 92 ntBASIC-1.52□□□□□ -2.65
SHANK3Q9BYB0 SNORD116-19-201ENST00000384729 92 ntBASIC-1.52□□□□□ -2.65
SHANK3Q9BYB0 MIR889-201ENST00000401280 79 ntBASIC-1.52□□□□□ -2.65
SHANK3Q9BYB0 MIR1297-201ENST00000637311 77 ntBASIC-1.52□□□□□ -2.65
SHANK3Q9BYB0 SNORD115-27-201ENST00000364430 82 ntBASIC-1.53□□□□□ -2.65
SHANK3Q9BYB0 SNORD116-22-201ENST00000384430 92 ntBASIC-1.53□□□□□ -2.65
SHANK3Q9BYB0 AC090616.4-201ENST00000448026 115 ntBASIC-1.53□□□□□ -2.65
SHANK3Q9BYB0 RNU6-346P-201ENST00000516288 111 ntBASIC-1.53□□□□□ -2.65
SHANK3Q9BYB0 RNA5SP215-201ENST00000363440 122 ntBASIC-1.54□□□□□ -2.66
SHANK3Q9BYB0 RNU7-174P-201ENST00000516248 59 ntBASIC-1.54□□□□□ -2.66
SHANK3Q9BYB0 MIR4520-1-201ENST00000582609 70 ntBASIC-1.54□□□□□ -2.66
SHANK3Q9BYB0 RNU6-79P-201ENST00000362511 107 ntBASIC-1.54□□□□□ -2.66
SHANK3Q9BYB0 RNU6-645P-201ENST00000364649 106 ntBASIC-1.54□□□□□ -2.66
SHANK3Q9BYB0 RNU6-959P-201ENST00000384671 107 ntBASIC-1.54□□□□□ -2.66
SHANK3Q9BYB0 MTATP8P2-201ENST00000435212 202 ntBASIC-1.54□□□□□ -2.66
SHANK3Q9BYB0 RNU6-168P-201ENST00000516189 101 ntBASIC-1.54□□□□□ -2.66
SHANK3Q9BYB0 RNU6-794P-201ENST00000517261 64 ntBASIC-1.54□□□□□ -2.66
SHANK3Q9BYB0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.54□□□□□ -2.66
SHANK3Q9BYB0 RNU6-698P-201ENST00000363523 107 ntBASIC-1.55□□□□□ -2.66
SHANK3Q9BYB0 RNU6-704P-201ENST00000364162 103 ntBASIC-1.55□□□□□ -2.66
SHANK3Q9BYB0 RNU6-34P-201ENST00000364874 107 ntBASIC-1.55□□□□□ -2.66
SHANK3Q9BYB0 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.55□□□□□ -2.66
SHANK3Q9BYB0 RNU6-458P-201ENST00000384179 107 ntBASIC-1.56□□□□□ -2.66
SHANK3Q9BYB0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.56□□□□□ -2.66
SHANK3Q9BYB0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.56□□□□□ -2.66
SHANK3Q9BYB0 RNU6-162P-201ENST00000516228 103 ntBASIC-1.56□□□□□ -2.66
SHANK3Q9BYB0 RNU6-303P-201ENST00000517091 106 ntBASIC-1.56□□□□□ -2.66
SHANK3Q9BYB0 U6.58-201ENST00000613107 107 ntBASIC-1.56□□□□□ -2.66
SHANK3Q9BYB0 AC093729.1-201ENST00000513074 128 ntBASIC-1.57□□□□□ -2.66
SHANK3Q9BYB0 RNU6-478P-201ENST00000363904 110 ntBASIC-1.58□□□□□ -2.66
SHANK3Q9BYB0 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.58□□□□□ -2.66
SHANK3Q9BYB0 RNU6-400P-201ENST00000391173 106 ntBASIC-1.58□□□□□ -2.66
SHANK3Q9BYB0 RNU6-587P-201ENST00000391282 106 ntBASIC-1.58□□□□□ -2.66
SHANK3Q9BYB0 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.58□□□□□ -2.66
SHANK3Q9BYB0 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.58□□□□□ -2.66
SHANK3Q9BYB0 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.59□□□□□ -2.66
SHANK3Q9BYB0 AC008267.6-201ENST00000441664 139 ntBASIC-1.59□□□□□ -2.66
SHANK3Q9BYB0 SNORD54-201ENST00000459159 67 ntBASIC-1.59□□□□□ -2.66
SHANK3Q9BYB0 RNU6-983P-201ENST00000516004 103 ntBASIC-1.59□□□□□ -2.66
SHANK3Q9BYB0 RNU6-554P-201ENST00000410466 106 ntBASIC-1.6□□□□□ -2.67
SHANK3Q9BYB0 MIR8053-201ENST00000613344 75 ntBASIC-1.6□□□□□ -2.67
SHANK3Q9BYB0 RNU6-226P-201ENST00000363778 107 ntBASIC-1.6□□□□□ -2.67
SHANK3Q9BYB0 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.6□□□□□ -2.67
SHANK3Q9BYB0 SNORA19-201ENST00000384737 128 ntBASIC-1.6□□□□□ -2.67
SHANK3Q9BYB0 RNU6-557P-201ENST00000516842 110 ntBASIC-1.6□□□□□ -2.67
SHANK3Q9BYB0 MIR548AG1-201ENST00000579932 66 ntBASIC-1.6□□□□□ -2.67
SHANK3Q9BYB0 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.61□□□□□ -2.67
SHANK3Q9BYB0 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.61□□□□□ -2.67
SHANK3Q9BYB0 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.61□□□□□ -2.67
SHANK3Q9BYB0 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.61□□□□□ -2.67
SHANK3Q9BYB0 MTND4LP1-201ENST00000446263 157 ntBASIC-1.61□□□□□ -2.67
SHANK3Q9BYB0 RNU6-255P-201ENST00000516957 105 ntBASIC-1.61□□□□□ -2.67
SHANK3Q9BYB0 RNA5SP93-201ENST00000362525 114 ntBASIC-1.62□□□□□ -2.67
SHANK3Q9BYB0 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.62□□□□□ -2.67
SHANK3Q9BYB0 MIR4668-201ENST00000582284 70 ntBASIC-1.62□□□□□ -2.67
SHANK3Q9BYB0 RNU6-834P-201ENST00000362367 110 ntBASIC-1.63□□□□□ -2.67
SHANK3Q9BYB0 RNU6-766P-201ENST00000362478 107 ntBASIC-1.63□□□□□ -2.67
SHANK3Q9BYB0 MIR548AA1-201ENST00000384971 97 ntBASIC-1.63□□□□□ -2.67
SHANK3Q9BYB0 RNU6-630P-201ENST00000391258 106 ntBASIC-1.63□□□□□ -2.67
SHANK3Q9BYB0 MIR6129-201ENST00000616087 109 ntBASIC-1.63□□□□□ -2.67
SHANK3Q9BYB0 MIR6874-201ENST00000635894 71 ntBASIC-1.63□□□□□ -2.67
SHANK3Q9BYB0 SNORD45.1-201ENST00000363181 77 ntBASIC-1.63□□□□□ -2.67
SHANK3Q9BYB0 RPL35AP4-201ENST00000412007 102 ntBASIC-1.63□□□□□ -2.67
SHANK3Q9BYB0 RNU6-109P-201ENST00000516364 107 ntBASIC-1.63□□□□□ -2.67
SHANK3Q9BYB0 RNU6-184P-201ENST00000516514 107 ntBASIC-1.63□□□□□ -2.67
SHANK3Q9BYB0 U4.4-201ENST00000620626 117 ntBASIC-1.63□□□□□ -2.67
SHANK3Q9BYB0 SNORA8.1-201ENST00000384250 140 ntBASIC-1.64□□□□□ -2.67
SHANK3Q9BYB0 MIR548C-201ENST00000384815 97 ntBASIC-1.64□□□□□ -2.67
SHANK3Q9BYB0 RNU6-129P-201ENST00000391022 107 ntBASIC-1.64□□□□□ -2.67
SHANK3Q9BYB0 RNU6-695P-201ENST00000391157 104 ntBASIC-1.64□□□□□ -2.67
SHANK3Q9BYB0 AC074348.1-201ENST00000426503 132 ntBASIC-1.64□□□□□ -2.67
SHANK3Q9BYB0 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.64□□□□□ -2.67
SHANK3Q9BYB0 MIR548V-201ENST00000584165 80 ntBASIC-1.64□□□□□ -2.67
SHANK3Q9BYB0 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.65□□□□□ -2.67
SHANK3Q9BYB0 RNU6-380P-201ENST00000410207 107 ntBASIC-1.65□□□□□ -2.67
SHANK3Q9BYB0 SNORA40.13-201ENST00000516379 120 ntBASIC-1.66□□□□□ -2.67
SHANK3Q9BYB0 AC006160.2-201ENST00000637708 154 ntBASIC-1.66□□□□□ -2.67
SHANK3Q9BYB0 RNU6-755P-201ENST00000364400 103 ntBASIC-1.66□□□□□ -2.68
SHANK3Q9BYB0 MIR548H1-201ENST00000408610 102 ntBASIC-1.66□□□□□ -2.68
SHANK3Q9BYB0 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.67□□□□□ -2.68
SHANK3Q9BYB0 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.67□□□□□ -2.68
SHANK3Q9BYB0 SNORD113-2-201ENST00000391082 72 ntBASIC-1.67□□□□□ -2.68
SHANK3Q9BYB0 RNY4P18-201ENST00000391107 89 ntBASIC-1.67□□□□□ -2.68
SHANK3Q9BYB0 RNU6-589P-201ENST00000516485 107 ntBASIC-1.67□□□□□ -2.68
SHANK3Q9BYB0 MIR630-201ENST00000384957 97 ntBASIC-1.68□□□□□ -2.68
SHANK3Q9BYB0 RNU6-686P-201ENST00000364839 107 ntBASIC-1.69□□□□□ -2.68
SHANK3Q9BYB0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
SHANK3Q9BYB0 AP001318.4-201ENST00000616637 121 ntBASIC-1.69□□□□□ -2.68
SHANK3Q9BYB0 AC099654.10-201ENST00000640395 161 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms