Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RNU4-61P-201ENST00000411243 107 ntBASIC-1.04□□□□□ -2.58
RPUSD4Q96CM3 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.04□□□□□ -2.58
RPUSD4Q96CM3 MIR5683-201ENST00000636514 76 ntBASIC-1.04□□□□□ -2.58
RPUSD4Q96CM3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.05□□□□□ -2.58
RPUSD4Q96CM3 RNU6-164P-201ENST00000364604 103 ntBASIC-1.06□□□□□ -2.58
RPUSD4Q96CM3 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.06□□□□□ -2.58
RPUSD4Q96CM3 RNU6-807P-201ENST00000516805 107 ntBASIC-1.06□□□□□ -2.58
RPUSD4Q96CM3 RNU6-303P-201ENST00000517091 106 ntBASIC-1.06□□□□□ -2.58
RPUSD4Q96CM3 RNU6-608P-201ENST00000383927 104 ntBASIC-1.07□□□□□ -2.58
RPUSD4Q96CM3 RNU6-576P-201ENST00000390854 102 ntBASIC-1.07□□□□□ -2.58
RPUSD4Q96CM3 RNU6-982P-201ENST00000516216 102 ntBASIC-1.07□□□□□ -2.58
RPUSD4Q96CM3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.07□□□□□ -2.58
RPUSD4Q96CM3 RNU6-645P-201ENST00000364649 106 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 RNU6-32P-201ENST00000383948 107 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 RNU6-675P-201ENST00000384236 104 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 RNU6-13P-201ENST00000384248 107 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 RNU6-12P-201ENST00000384604 107 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 RNU6-41P-201ENST00000384741 107 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 AL603908.1-201ENST00000406098 201 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 RNU6-402P-201ENST00000410678 103 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 AC074348.1-201ENST00000426503 132 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 MIR5591-201ENST00000578248 65 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 MIR548BB-201ENST00000626714 66 ntBASIC-1.08□□□□□ -2.58
RPUSD4Q96CM3 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.09□□□□□ -2.58
RPUSD4Q96CM3 RNU6-598P-201ENST00000364017 105 ntBASIC-1.09□□□□□ -2.58
RPUSD4Q96CM3 SNORD114-15-201ENST00000364687 72 ntBASIC-1.09□□□□□ -2.58
RPUSD4Q96CM3 RNU6-686P-201ENST00000364839 107 ntBASIC-1.09□□□□□ -2.58
RPUSD4Q96CM3 MIR487B-201ENST00000385021 84 ntBASIC-1.09□□□□□ -2.58
RPUSD4Q96CM3 RNU6-168P-201ENST00000516189 101 ntBASIC-1.09□□□□□ -2.58
RPUSD4Q96CM3 RNU7-174P-201ENST00000516248 59 ntBASIC-1.09□□□□□ -2.58
RPUSD4Q96CM3 RNA5SP395-201ENST00000516567 118 ntBASIC-1.09□□□□□ -2.58
RPUSD4Q96CM3 RNU6-640P-201ENST00000363693 105 ntBASIC-1.1□□□□□ -2.59
RPUSD4Q96CM3 RNU6-215P-201ENST00000365169 102 ntBASIC-1.1□□□□□ -2.59
RPUSD4Q96CM3 RNU6-458P-201ENST00000384179 107 ntBASIC-1.1□□□□□ -2.59
RPUSD4Q96CM3 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.1□□□□□ -2.59
RPUSD4Q96CM3 HLA-S-202ENST00000425174 53 ntBASIC-1.1□□□□□ -2.59
RPUSD4Q96CM3 U6.58-201ENST00000613107 107 ntBASIC-1.1□□□□□ -2.59
RPUSD4Q96CM3 U4.4-201ENST00000620626 117 ntBASIC-1.1□□□□□ -2.59
RPUSD4Q96CM3 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.11□□□□□ -2.59
RPUSD4Q96CM3 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.11□□□□□ -2.59
RPUSD4Q96CM3 RNA5SP86-201ENST00000390869 98 ntBASIC-1.11□□□□□ -2.59
RPUSD4Q96CM3 MIR3675-201ENST00000583661 73 ntBASIC-1.11□□□□□ -2.59
RPUSD4Q96CM3 U2.18-201ENST00000622185 84 ntBASIC-1.11□□□□□ -2.59
RPUSD4Q96CM3 MIR6086-201ENST00000638065 55 ntBASIC-1.11□□□□□ -2.59
RPUSD4Q96CM3 MIR488-201ENST00000365739 83 ntBASIC-1.12□□□□□ -2.59
RPUSD4Q96CM3 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.12□□□□□ -2.59
RPUSD4Q96CM3 RNU6-258P-201ENST00000390884 101 ntBASIC-1.12□□□□□ -2.59
RPUSD4Q96CM3 RNU6-630P-201ENST00000391258 106 ntBASIC-1.12□□□□□ -2.59
RPUSD4Q96CM3 MIR548Q-201ENST00000408404 100 ntBASIC-1.12□□□□□ -2.59
RPUSD4Q96CM3 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.12□□□□□ -2.59
RPUSD4Q96CM3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.12□□□□□ -2.59
RPUSD4Q96CM3 RNU6-267P-201ENST00000516714 103 ntBASIC-1.12□□□□□ -2.59
RPUSD4Q96CM3 RNU6-919P-201ENST00000516731 104 ntBASIC-1.12□□□□□ -2.59
RPUSD4Q96CM3 MIR548AX-201ENST00000580117 73 ntBASIC-1.12□□□□□ -2.59
RPUSD4Q96CM3 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.13□□□□□ -2.59
RPUSD4Q96CM3 RNU6-563P-201ENST00000364872 108 ntBASIC-1.13□□□□□ -2.59
RPUSD4Q96CM3 MIR548C-201ENST00000384815 97 ntBASIC-1.13□□□□□ -2.59
RPUSD4Q96CM3 RNU6-129P-201ENST00000391022 107 ntBASIC-1.13□□□□□ -2.59
RPUSD4Q96CM3 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.13□□□□□ -2.59
RPUSD4Q96CM3 RNU6-789P-201ENST00000517105 102 ntBASIC-1.13□□□□□ -2.59
RPUSD4Q96CM3 MIR3165-201ENST00000579874 75 ntBASIC-1.13□□□□□ -2.59
RPUSD4Q96CM3 AC138207.3-201ENST00000585289 166 ntBASIC-1.13□□□□□ -2.59
RPUSD4Q96CM3 RNU6-147P-201ENST00000383983 107 ntBASIC-1.14□□□□□ -2.59
RPUSD4Q96CM3 RNU6-587P-201ENST00000391282 106 ntBASIC-1.14□□□□□ -2.59
RPUSD4Q96CM3 AL606753.1-201ENST00000427435 87 ntBASIC-1.14□□□□□ -2.59
RPUSD4Q96CM3 MIR1297-201ENST00000637311 77 ntBASIC-1.14□□□□□ -2.59
RPUSD4Q96CM3 RNU6-79P-201ENST00000362511 107 ntBASIC-1.15□□□□□ -2.59
RPUSD4Q96CM3 RNU6-604P-201ENST00000390917 100 ntBASIC-1.15□□□□□ -2.59
RPUSD4Q96CM3 SNORD57-201ENST00000448188 72 ntBASIC-1.15□□□□□ -2.59
RPUSD4Q96CM3 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.15□□□□□ -2.59
RPUSD4Q96CM3 RNU6-406P-201ENST00000516470 107 ntBASIC-1.15□□□□□ -2.59
RPUSD4Q96CM3 RNU6-844P-201ENST00000517175 102 ntBASIC-1.15□□□□□ -2.59
RPUSD4Q96CM3 MIR4490-201ENST00000582647 84 ntBASIC-1.15□□□□□ -2.59
RPUSD4Q96CM3 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.16□□□□□ -2.6
RPUSD4Q96CM3 SNORA8.1-201ENST00000384250 140 ntBASIC-1.16□□□□□ -2.6
RPUSD4Q96CM3 MIR587-201ENST00000384845 96 ntBASIC-1.16□□□□□ -2.6
RPUSD4Q96CM3 AC006160.2-201ENST00000637708 154 ntBASIC-1.16□□□□□ -2.6
RPUSD4Q96CM3 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.17□□□□□ -2.6
RPUSD4Q96CM3 RNU6-540P-201ENST00000384622 101 ntBASIC-1.17□□□□□ -2.6
RPUSD4Q96CM3 SNORD20-201ENST00000384550 80 ntBASIC-1.18□□□□□ -2.6
RPUSD4Q96CM3 RNU6-30P-201ENST00000384561 107 ntBASIC-1.18□□□□□ -2.6
RPUSD4Q96CM3 RNU6-696P-201ENST00000390834 107 ntBASIC-1.18□□□□□ -2.6
RPUSD4Q96CM3 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.18□□□□□ -2.6
RPUSD4Q96CM3 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.18□□□□□ -2.6
RPUSD4Q96CM3 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.19□□□□□ -2.6
RPUSD4Q96CM3 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.19□□□□□ -2.6
RPUSD4Q96CM3 snoU13.19-201ENST00000459148 104 ntBASIC-1.19□□□□□ -2.6
RPUSD4Q96CM3 MIR4770-201ENST00000579149 58 ntBASIC-1.19□□□□□ -2.6
RPUSD4Q96CM3 MIR664A-201ENST00000626086 82 ntBASIC-1.19□□□□□ -2.6
RPUSD4Q96CM3 SNORA63.4-201ENST00000362763 126 ntBASIC-1.2□□□□□ -2.6
RPUSD4Q96CM3 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.2□□□□□ -2.6
RPUSD4Q96CM3 SNORA41B-201ENST00000384785 128 ntBASIC-1.2□□□□□ -2.6
RPUSD4Q96CM3 MIR630-201ENST00000384957 97 ntBASIC-1.2□□□□□ -2.6
RPUSD4Q96CM3 RNU6-380P-201ENST00000410207 107 ntBASIC-1.2□□□□□ -2.6
RPUSD4Q96CM3 MIR4484-201ENST00000582855 83 ntBASIC-1.2□□□□□ -2.6
RPUSD4Q96CM3 RNU6-315P-201ENST00000362666 107 ntBASIC-1.21□□□□□ -2.6
RPUSD4Q96CM3 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.21□□□□□ -2.6
RPUSD4Q96CM3 AC018880.2-201ENST00000414265 201 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 260 ms