Protein–RNA interactions for Protein: Q8NER1

TRPV1, Transient receptor potential cation channel subfamily V member 1, humanhuman

Predictions only

Length 839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1Q8NER1 RNU6-537P-201ENST00000517277 103 ntBASIC-1.75□□□□□ -2.69
TRPV1Q8NER1 RNA5SP93-201ENST00000362525 114 ntBASIC-1.76□□□□□ -2.69
TRPV1Q8NER1 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.76□□□□□ -2.69
TRPV1Q8NER1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.76□□□□□ -2.69
TRPV1Q8NER1 RNU7-61P-201ENST00000515897 61 ntBASIC-1.76□□□□□ -2.69
TRPV1Q8NER1 RNU6-162P-201ENST00000516228 103 ntBASIC-1.76□□□□□ -2.69
TRPV1Q8NER1 RNU7-153P-201ENST00000516455 62 ntBASIC-1.76□□□□□ -2.69
TRPV1Q8NER1 AC099654.10-201ENST00000640395 161 ntBASIC-1.76□□□□□ -2.69
TRPV1Q8NER1 RNU6-681P-201ENST00000364012 104 ntBASIC-1.77□□□□□ -2.69
TRPV1Q8NER1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.77□□□□□ -2.69
TRPV1Q8NER1 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.77□□□□□ -2.69
TRPV1Q8NER1 RNU6-340P-201ENST00000364005 107 ntBASIC-1.78□□□□□ -2.69
TRPV1Q8NER1 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.78□□□□□ -2.69
TRPV1Q8NER1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.78□□□□□ -2.69
TRPV1Q8NER1 RNU6-659P-201ENST00000516454 104 ntBASIC-1.78□□□□□ -2.69
TRPV1Q8NER1 MIR3123-201ENST00000583417 75 ntBASIC-1.78□□□□□ -2.69
TRPV1Q8NER1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.78□□□□□ -2.69
TRPV1Q8NER1 U2.7-201ENST00000619197 100 ntBASIC-1.78□□□□□ -2.69
TRPV1Q8NER1 MIR664B-201ENST00000626756 61 ntBASIC-1.78□□□□□ -2.69
TRPV1Q8NER1 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.79□□□□□ -2.7
TRPV1Q8NER1 MIR1302-5-201ENST00000408164 150 ntBASIC-1.8□□□□□ -2.7
TRPV1Q8NER1 RNU6-656P-201ENST00000516785 107 ntBASIC-1.8□□□□□ -2.7
TRPV1Q8NER1 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.81□□□□□ -2.7
TRPV1Q8NER1 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.81□□□□□ -2.7
TRPV1Q8NER1 RNY4P7-201ENST00000364600 96 ntBASIC-1.81□□□□□ -2.7
TRPV1Q8NER1 RNU6-458P-201ENST00000384179 107 ntBASIC-1.81□□□□□ -2.7
TRPV1Q8NER1 AL035461.1-201ENST00000421490 332 ntBASIC-1.81□□□□□ -2.7
TRPV1Q8NER1 AC120024.2-201ENST00000576526 175 ntBASIC-1.81□□□□□ -2.7
TRPV1Q8NER1 U6.58-201ENST00000613107 107 ntBASIC-1.81□□□□□ -2.7
TRPV1Q8NER1 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.82□□□□□ -2.7
TRPV1Q8NER1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.82□□□□□ -2.7
TRPV1Q8NER1 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.82□□□□□ -2.7
TRPV1Q8NER1 MIR590-201ENST00000385008 97 ntBASIC-1.82□□□□□ -2.7
TRPV1Q8NER1 RNU6-980P-201ENST00000516925 103 ntBASIC-1.82□□□□□ -2.7
TRPV1Q8NER1 RNU6-255P-201ENST00000516957 105 ntBASIC-1.82□□□□□ -2.7
TRPV1Q8NER1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.82□□□□□ -2.7
TRPV1Q8NER1 MIR548AM-201ENST00000584298 74 ntBASIC-1.82□□□□□ -2.7
TRPV1Q8NER1 MIR548C-201ENST00000384815 97 ntBASIC-1.83□□□□□ -2.7
TRPV1Q8NER1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.83□□□□□ -2.7
TRPV1Q8NER1 SNORD77.2-201ENST00000391045 68 ntBASIC-1.83□□□□□ -2.7
TRPV1Q8NER1 SNORD54-201ENST00000459159 67 ntBASIC-1.83□□□□□ -2.7
TRPV1Q8NER1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.83□□□□□ -2.7
TRPV1Q8NER1 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.84□□□□□ -2.7
TRPV1Q8NER1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.84□□□□□ -2.7
TRPV1Q8NER1 RNU6-807P-201ENST00000516805 107 ntBASIC-1.84□□□□□ -2.7
TRPV1Q8NER1 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.85□□□□□ -2.71
TRPV1Q8NER1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.85□□□□□ -2.71
TRPV1Q8NER1 AC090425.1-201ENST00000610007 140 ntBASIC-1.85□□□□□ -2.71
TRPV1Q8NER1 U7.3-201ENST00000616123 62 ntBASIC-1.85□□□□□ -2.71
TRPV1Q8NER1 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.86□□□□□ -2.71
TRPV1Q8NER1 RNU6-598P-201ENST00000364017 105 ntBASIC-1.86□□□□□ -2.71
TRPV1Q8NER1 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.86□□□□□ -2.71
TRPV1Q8NER1 MIR3139-201ENST00000579145 76 ntBASIC-1.86□□□□□ -2.71
TRPV1Q8NER1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.87□□□□□ -2.71
TRPV1Q8NER1 RNU6-109P-201ENST00000516364 107 ntBASIC-1.87□□□□□ -2.71
TRPV1Q8NER1 RNU6-184P-201ENST00000516514 107 ntBASIC-1.87□□□□□ -2.71
TRPV1Q8NER1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.87□□□□□ -2.71
TRPV1Q8NER1 RNY1P5-201ENST00000383890 115 ntBASIC-1.88□□□□□ -2.71
TRPV1Q8NER1 MIR519C-201ENST00000385053 87 ntBASIC-1.88□□□□□ -2.71
TRPV1Q8NER1 U2.18-201ENST00000622185 84 ntBASIC-1.88□□□□□ -2.71
TRPV1Q8NER1 RNU6-645P-201ENST00000364649 106 ntBASIC-1.89□□□□□ -2.71
TRPV1Q8NER1 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.89□□□□□ -2.71
TRPV1Q8NER1 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.89□□□□□ -2.71
TRPV1Q8NER1 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.89□□□□□ -2.71
TRPV1Q8NER1 MIR4719-201ENST00000585233 84 ntBASIC-1.89□□□□□ -2.71
TRPV1Q8NER1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.89□□□□□ -2.71
TRPV1Q8NER1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.89□□□□□ -2.71
TRPV1Q8NER1 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.9□□□□□ -2.71
TRPV1Q8NER1 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.9□□□□□ -2.71
TRPV1Q8NER1 SNORD116-14-201ENST00000383894 92 ntBASIC-1.9□□□□□ -2.71
TRPV1Q8NER1 SNORD116-17-201ENST00000383929 92 ntBASIC-1.9□□□□□ -2.71
TRPV1Q8NER1 SNORD116-15-201ENST00000384445 92 ntBASIC-1.9□□□□□ -2.71
TRPV1Q8NER1 SNORD116-19-201ENST00000384729 92 ntBASIC-1.9□□□□□ -2.71
TRPV1Q8NER1 RNA5SP405-201ENST00000363059 114 ntBASIC-1.91□□□□□ -2.72
TRPV1Q8NER1 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.91□□□□□ -2.72
TRPV1Q8NER1 MT-TM-201ENST00000387377 68 ntBASIC-1.91□□□□□ -2.72
TRPV1Q8NER1 RNU7-174P-201ENST00000516248 59 ntBASIC-1.91□□□□□ -2.72
TRPV1Q8NER1 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.92□□□□□ -2.72
TRPV1Q8NER1 SNORD115-37-201ENST00000363768 82 ntBASIC-1.92□□□□□ -2.72
TRPV1Q8NER1 SNORD115-31-201ENST00000365318 82 ntBASIC-1.92□□□□□ -2.72
TRPV1Q8NER1 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.92□□□□□ -2.72
TRPV1Q8NER1 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.92□□□□□ -2.72
TRPV1Q8NER1 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.92□□□□□ -2.72
TRPV1Q8NER1 MIR23C-201ENST00000579846 100 ntBASIC-1.92□□□□□ -2.72
TRPV1Q8NER1 MIR3170-201ENST00000582699 77 ntBASIC-1.92□□□□□ -2.72
TRPV1Q8NER1 RNU6-766P-201ENST00000362478 107 ntBASIC-1.93□□□□□ -2.72
TRPV1Q8NER1 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.93□□□□□ -2.72
TRPV1Q8NER1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.93□□□□□ -2.72
TRPV1Q8NER1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.93□□□□□ -2.72
TRPV1Q8NER1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.94□□□□□ -2.72
TRPV1Q8NER1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
TRPV1Q8NER1 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.94□□□□□ -2.72
TRPV1Q8NER1 AC013734.1-201ENST00000619329 111 ntBASIC-1.94□□□□□ -2.72
TRPV1Q8NER1 RNU6-587P-201ENST00000391282 106 ntBASIC-1.95□□□□□ -2.72
TRPV1Q8NER1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.95□□□□□ -2.72
TRPV1Q8NER1 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.96□□□□□ -2.72
TRPV1Q8NER1 MIR548W-201ENST00000581970 74 ntBASIC-1.96□□□□□ -2.72
TRPV1Q8NER1 RNU6-554P-201ENST00000410466 106 ntBASIC-1.97□□□□□ -2.72
TRPV1Q8NER1 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.97□□□□□ -2.72
TRPV1Q8NER1 U4.4-201ENST00000620626 117 ntBASIC-1.97□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms