Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.09□□□□□ -2.74
CSPG4Q6UVK1 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.09□□□□□ -2.74
CSPG4Q6UVK1 RNU6-639P-201ENST00000384074 107 ntBASIC-2.09□□□□□ -2.74
CSPG4Q6UVK1 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.1□□□□□ -2.75
CSPG4Q6UVK1 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.1□□□□□ -2.75
CSPG4Q6UVK1 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.1□□□□□ -2.75
CSPG4Q6UVK1 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.1□□□□□ -2.75
CSPG4Q6UVK1 SNORD45.1-201ENST00000363181 77 ntBASIC-2.11□□□□□ -2.75
CSPG4Q6UVK1 RNA5SP215-201ENST00000363440 122 ntBASIC-2.11□□□□□ -2.75
CSPG4Q6UVK1 RNU6-275P-201ENST00000364910 107 ntBASIC-2.11□□□□□ -2.75
CSPG4Q6UVK1 RNU4-11P-201ENST00000365287 132 ntBASIC-2.11□□□□□ -2.75
CSPG4Q6UVK1 RNU6-239P-201ENST00000390990 99 ntBASIC-2.11□□□□□ -2.75
CSPG4Q6UVK1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.11□□□□□ -2.75
CSPG4Q6UVK1 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.11□□□□□ -2.75
CSPG4Q6UVK1 RNU6-988P-201ENST00000519081 107 ntBASIC-2.11□□□□□ -2.75
CSPG4Q6UVK1 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.12□□□□□ -2.75
CSPG4Q6UVK1 SNORA17.4-201ENST00000391287 132 ntBASIC-2.12□□□□□ -2.75
CSPG4Q6UVK1 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.12□□□□□ -2.75
CSPG4Q6UVK1 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.12□□□□□ -2.75
CSPG4Q6UVK1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.12□□□□□ -2.75
CSPG4Q6UVK1 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.13□□□□□ -2.75
CSPG4Q6UVK1 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.13□□□□□ -2.75
CSPG4Q6UVK1 Y_RNA.688-201ENST00000516565 95 ntBASIC-2.13□□□□□ -2.75
CSPG4Q6UVK1 RNU7-160P-201ENST00000516660 62 ntBASIC-2.13□□□□□ -2.75
CSPG4Q6UVK1 AC020661.2-201ENST00000560114 134 ntBASIC-2.13□□□□□ -2.75
CSPG4Q6UVK1 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.14□□□□□ -2.75
CSPG4Q6UVK1 SNORD113.1-201ENST00000363280 73 ntBASIC-2.14□□□□□ -2.75
CSPG4Q6UVK1 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.14□□□□□ -2.75
CSPG4Q6UVK1 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.14□□□□□ -2.75
CSPG4Q6UVK1 RNU6-520P-201ENST00000384717 104 ntBASIC-2.14□□□□□ -2.75
CSPG4Q6UVK1 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.14□□□□□ -2.75
CSPG4Q6UVK1 RNU6-668P-201ENST00000364180 107 ntBASIC-2.15□□□□□ -2.75
CSPG4Q6UVK1 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.15□□□□□ -2.75
CSPG4Q6UVK1 SNORA8.1-201ENST00000384250 140 ntBASIC-2.15□□□□□ -2.75
CSPG4Q6UVK1 RNU6-918P-201ENST00000391219 106 ntBASIC-2.15□□□□□ -2.75
CSPG4Q6UVK1 RNU6-590P-201ENST00000365039 107 ntBASIC-2.16□□□□□ -2.75
CSPG4Q6UVK1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.16□□□□□ -2.75
CSPG4Q6UVK1 MIR3688-2-201ENST00000636963 87 ntBASIC-2.16□□□□□ -2.75
CSPG4Q6UVK1 RNU6-172P-201ENST00000411000 93 ntBASIC-2.16□□□□□ -2.76
CSPG4Q6UVK1 RNU7-197P-201ENST00000458836 62 ntBASIC-2.16□□□□□ -2.76
CSPG4Q6UVK1 U7.2-201ENST00000607576 63 ntBASIC-2.16□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.17□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.17□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.17□□□□□ -2.76
CSPG4Q6UVK1 SNORD19B-201ENST00000459623 84 ntBASIC-2.17□□□□□ -2.76
CSPG4Q6UVK1 RNU6-176P-201ENST00000517196 105 ntBASIC-2.17□□□□□ -2.76
CSPG4Q6UVK1 SNORD116-4-201ENST00000384733 96 ntBASIC-2.18□□□□□ -2.76
CSPG4Q6UVK1 RNU2-16P-201ENST00000410712 136 ntBASIC-2.18□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.18□□□□□ -2.76
CSPG4Q6UVK1 RNU6-300P-201ENST00000459080 104 ntBASIC-2.18□□□□□ -2.76
CSPG4Q6UVK1 RNU6-795P-201ENST00000516323 103 ntBASIC-2.18□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.18□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.18□□□□□ -2.76
CSPG4Q6UVK1 RNU4-71P-201ENST00000516258 113 ntBASIC-2.18□□□□□ -2.76
CSPG4Q6UVK1 MIR3974-201ENST00000637126 96 ntBASIC-2.18□□□□□ -2.76
CSPG4Q6UVK1 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.19□□□□□ -2.76
CSPG4Q6UVK1 MIR1277-201ENST00000408536 78 ntBASIC-2.19□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.19□□□□□ -2.76
CSPG4Q6UVK1 MIR8053-201ENST00000613344 75 ntBASIC-2.19□□□□□ -2.76
CSPG4Q6UVK1 SNORD60.1-201ENST00000362451 73 ntBASIC-2.19□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.19□□□□□ -2.76
CSPG4Q6UVK1 RNU6-755P-201ENST00000364400 103 ntBASIC-2.19□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.19□□□□□ -2.76
CSPG4Q6UVK1 SNORD37.2-201ENST00000391075 66 ntBASIC-2.19□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.717-201ENST00000517106 92 ntBASIC-2.19□□□□□ -2.76
CSPG4Q6UVK1 U4.5-201ENST00000617137 123 ntBASIC-2.19□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.2□□□□□ -2.76
CSPG4Q6UVK1 RNU6-196P-201ENST00000384315 107 ntBASIC-2.2□□□□□ -2.76
CSPG4Q6UVK1 RNU6-887P-201ENST00000410660 100 ntBASIC-2.2□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.2□□□□□ -2.76
CSPG4Q6UVK1 RNU6-330P-201ENST00000363015 107 ntBASIC-2.2□□□□□ -2.76
CSPG4Q6UVK1 AC074348.1-201ENST00000426503 132 ntBASIC-2.2□□□□□ -2.76
CSPG4Q6UVK1 RNU6-718P-201ENST00000516166 105 ntBASIC-2.2□□□□□ -2.76
CSPG4Q6UVK1 RNU6-542P-201ENST00000516405 103 ntBASIC-2.2□□□□□ -2.76
CSPG4Q6UVK1 SNORD45A-201ENST00000384512 84 ntBASIC-2.21□□□□□ -2.76
CSPG4Q6UVK1 SNORD58.1-201ENST00000391313 66 ntBASIC-2.21□□□□□ -2.76
CSPG4Q6UVK1 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.21□□□□□ -2.76
CSPG4Q6UVK1 SNORA81.3-201ENST00000517283 198 ntBASIC-2.21□□□□□ -2.76
CSPG4Q6UVK1 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.22□□□□□ -2.76
CSPG4Q6UVK1 SNORD116.2-201ENST00000391251 93 ntBASIC-2.22□□□□□ -2.76
CSPG4Q6UVK1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.22□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.22□□□□□ -2.76
CSPG4Q6UVK1 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.22□□□□□ -2.76
CSPG4Q6UVK1 RNU6-604P-201ENST00000390917 100 ntBASIC-2.22□□□□□ -2.76
CSPG4Q6UVK1 SCARNA23-201ENST00000516060 130 ntBASIC-2.23□□□□□ -2.77
CSPG4Q6UVK1 RNU6-828P-201ENST00000364876 107 ntBASIC-2.23□□□□□ -2.77
CSPG4Q6UVK1 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.23□□□□□ -2.77
CSPG4Q6UVK1 MIR1297-201ENST00000637311 77 ntBASIC-2.23□□□□□ -2.77
CSPG4Q6UVK1 RNU6-92P-201ENST00000605893 104 ntBASIC-2.24□□□□□ -2.77
CSPG4Q6UVK1 MIR7110-201ENST00000612638 86 ntBASIC-2.24□□□□□ -2.77
CSPG4Q6UVK1 AL035470.1-201ENST00000622571 220 ntBASIC-2.24□□□□□ -2.77
CSPG4Q6UVK1 SNORD45.2-201ENST00000363552 72 ntBASIC-2.24□□□□□ -2.77
CSPG4Q6UVK1 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.24□□□□□ -2.77
CSPG4Q6UVK1 Y_RNA.202-201ENST00000364083 110 ntBASIC-2.24□□□□□ -2.77
CSPG4Q6UVK1 SNORD58C-201ENST00000365223 64 ntBASIC-2.24□□□□□ -2.77
CSPG4Q6UVK1 SNORA40B-201ENST00000385573 128 ntBASIC-2.24□□□□□ -2.77
CSPG4Q6UVK1 MIR1254-1-201ENST00000408257 97 ntBASIC-2.24□□□□□ -2.77
CSPG4Q6UVK1 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.24□□□□□ -2.77
CSPG4Q6UVK1 RNU6-904P-201ENST00000516206 101 ntBASIC-2.25□□□□□ -2.77
CSPG4Q6UVK1 AP001340.1-201ENST00000624405 217 ntBASIC-2.25□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms