Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 Y_RNA.337-201ENST00000365312 102 ntBASIC-4.48□□□□□ -3.13
CCDC58Q4VC31 RNU6-737P-201ENST00000365370 107 ntBASIC-4.48□□□□□ -3.13
CCDC58Q4VC31 Y_RNA.645-201ENST00000391229 102 ntBASIC-4.48□□□□□ -3.13
CCDC58Q4VC31 Y_RNA.309-201ENST00000365046 111 ntBASIC-4.49□□□□□ -3.13
CCDC58Q4VC31 RNU6-129P-201ENST00000391022 107 ntBASIC-4.49□□□□□ -3.13
CCDC58Q4VC31 MIR1277-201ENST00000408536 78 ntBASIC-4.49□□□□□ -3.13
CCDC58Q4VC31 RNU6-300P-201ENST00000459080 104 ntBASIC-4.49□□□□□ -3.13
CCDC58Q4VC31 U4.5-201ENST00000617137 123 ntBASIC-4.49□□□□□ -3.13
CCDC58Q4VC31 MIR3974-201ENST00000637126 96 ntBASIC-4.49□□□□□ -3.13
CCDC58Q4VC31 Y_RNA.264-201ENST00000364665 102 ntBASIC-4.5□□□□□ -3.13
CCDC58Q4VC31 RNU6-1108P-201ENST00000516308 104 ntBASIC-4.5□□□□□ -3.13
CCDC58Q4VC31 Y_RNA.688-201ENST00000516565 95 ntBASIC-4.5□□□□□ -3.13
CCDC58Q4VC31 SNORD45.1-201ENST00000363181 77 ntBASIC-4.51□□□□□ -3.13
CCDC58Q4VC31 RNU6-1169P-201ENST00000363537 103 ntBASIC-4.51□□□□□ -3.13
CCDC58Q4VC31 RNU6-639P-201ENST00000384074 107 ntBASIC-4.51□□□□□ -3.13
CCDC58Q4VC31 MTND4LP1-201ENST00000446263 157 ntBASIC-4.51□□□□□ -3.13
CCDC58Q4VC31 AC090971.5-201ENST00000621102 293 ntBASIC-4.51□□□□□ -3.13
CCDC58Q4VC31 RNU6-795P-201ENST00000516323 103 ntBASIC-4.52□□□□□ -3.13
CCDC58Q4VC31 RNU6-176P-201ENST00000517196 105 ntBASIC-4.52□□□□□ -3.13
CCDC58Q4VC31 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-4.52□□□□□ -3.13
CCDC58Q4VC31 Y_RNA.609-201ENST00000410669 89 ntBASIC-4.53□□□□□ -3.13
CCDC58Q4VC31 SNORA8.1-201ENST00000384250 140 ntBASIC-4.54□□□□□ -3.14
CCDC58Q4VC31 AC069439.1-201ENST00000494739 167 ntBASIC-4.55□□□□□ -3.14
CCDC58Q4VC31 RNU6-182P-201ENST00000516970 105 ntBASIC-4.55□□□□□ -3.14
CCDC58Q4VC31 Y_RNA.384-201ENST00000383909 102 ntBASIC-4.56□□□□□ -3.14
CCDC58Q4VC31 Y_RNA.649-201ENST00000459077 103 ntBASIC-4.56□□□□□ -3.14
CCDC58Q4VC31 RNU6-781P-201ENST00000516377 101 ntBASIC-4.56□□□□□ -3.14
CCDC58Q4VC31 AC130289.1-201ENST00000577321 73 ntBASIC-4.56□□□□□ -3.14
CCDC58Q4VC31 Y_RNA.292-201ENST00000364904 97 ntBASIC-4.57□□□□□ -3.14
CCDC58Q4VC31 Y_RNA.29-201ENST00000362570 113 ntBASIC-4.58□□□□□ -3.14
CCDC58Q4VC31 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.58□□□□□ -3.14
CCDC58Q4VC31 SNORD127-201ENST00000458892 86 ntBASIC-4.58□□□□□ -3.14
CCDC58Q4VC31 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.58□□□□□ -3.14
CCDC58Q4VC31 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-4.58□□□□□ -3.14
CCDC58Q4VC31 SNORD115-45-201ENST00000391078 81 ntBASIC-4.59□□□□□ -3.14
CCDC58Q4VC31 RNU6-972P-201ENST00000391208 107 ntBASIC-4.59□□□□□ -3.14
CCDC58Q4VC31 RNU6-537P-201ENST00000517277 103 ntBASIC-4.59□□□□□ -3.14
CCDC58Q4VC31 AL035470.1-201ENST00000622571 220 ntBASIC-4.59□□□□□ -3.14
CCDC58Q4VC31 RNU6-755P-201ENST00000364400 103 ntBASIC-4.6□□□□□ -3.15
CCDC58Q4VC31 Y_RNA.705-201ENST00000516862 110 ntBASIC-4.6□□□□□ -3.15
CCDC58Q4VC31 Y_RNA.158-201ENST00000363651 101 ntBASIC-4.61□□□□□ -3.15
CCDC58Q4VC31 SNORD37.2-201ENST00000391075 66 ntBASIC-4.61□□□□□ -3.15
CCDC58Q4VC31 RNU6-810P-201ENST00000364001 107 ntBASIC-4.62□□□□□ -3.15
CCDC58Q4VC31 RNU6-887P-201ENST00000410660 100 ntBASIC-4.62□□□□□ -3.15
CCDC58Q4VC31 RNU6-277P-201ENST00000516272 106 ntBASIC-4.62□□□□□ -3.15
CCDC58Q4VC31 Y_RNA.717-201ENST00000517106 92 ntBASIC-4.62□□□□□ -3.15
CCDC58Q4VC31 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-4.63□□□□□ -3.15
CCDC58Q4VC31 Y_RNA.210-201ENST00000364161 110 ntBASIC-4.64□□□□□ -3.15
CCDC58Q4VC31 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-4.65□□□□□ -3.15
CCDC58Q4VC31 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.65□□□□□ -3.15
CCDC58Q4VC31 RNU6-303P-201ENST00000517091 106 ntBASIC-4.65□□□□□ -3.15
CCDC58Q4VC31 MIR4643-201ENST00000577473 78 ntBASIC-4.65□□□□□ -3.15
CCDC58Q4VC31 MIR7110-201ENST00000612638 86 ntBASIC-4.65□□□□□ -3.15
CCDC58Q4VC31 Y_RNA.160-201ENST00000363677 92 ntBASIC-4.66□□□□□ -3.16
CCDC58Q4VC31 SNORD116-10-201ENST00000363791 102 ntBASIC-4.66□□□□□ -3.16
CCDC58Q4VC31 RNU6-915P-201ENST00000364943 103 ntBASIC-4.67□□□□□ -3.16
CCDC58Q4VC31 SNORD19B-201ENST00000459623 84 ntBASIC-4.67□□□□□ -3.16
CCDC58Q4VC31 AC074348.1-201ENST00000426503 132 ntBASIC-4.68□□□□□ -3.16
CCDC58Q4VC31 MIR4679-2-201ENST00000578358 77 ntBASIC-4.68□□□□□ -3.16
CCDC58Q4VC31 SNORD113.1-201ENST00000363280 73 ntBASIC-4.69□□□□□ -3.16
CCDC58Q4VC31 Y_RNA.197-201ENST00000364004 102 ntBASIC-4.69□□□□□ -3.16
CCDC58Q4VC31 RNU6-854P-201ENST00000364036 107 ntBASIC-4.69□□□□□ -3.16
CCDC58Q4VC31 RNU6-1124P-201ENST00000384169 107 ntBASIC-4.69□□□□□ -3.16
CCDC58Q4VC31 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-4.69□□□□□ -3.16
CCDC58Q4VC31 MIR1302-1-201ENST00000637932 143 ntBASIC-4.69□□□□□ -3.16
CCDC58Q4VC31 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-4.7□□□□□ -3.16
CCDC58Q4VC31 Y_RNA.632-201ENST00000459189 102 ntBASIC-4.7□□□□□ -3.16
CCDC58Q4VC31 RNU6-718P-201ENST00000516166 105 ntBASIC-4.7□□□□□ -3.16
CCDC58Q4VC31 RNU6-789P-201ENST00000517105 102 ntBASIC-4.7□□□□□ -3.16
CCDC58Q4VC31 SNORD45.2-201ENST00000363552 72 ntBASIC-4.71□□□□□ -3.16
CCDC58Q4VC31 RNU4-40P-201ENST00000364351 143 ntBASIC-4.71□□□□□ -3.16
CCDC58Q4VC31 MIR1302-6-201ENST00000408466 90 ntBASIC-4.71□□□□□ -3.16
CCDC58Q4VC31 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.72□□□□□ -3.17
CCDC58Q4VC31 RNU6-460P-201ENST00000391158 108 ntBASIC-4.72□□□□□ -3.17
CCDC58Q4VC31 Y_RNA.680-201ENST00000516441 93 ntBASIC-4.72□□□□□ -3.17
CCDC58Q4VC31 RNU7-121P-201ENST00000516604 62 ntBASIC-4.72□□□□□ -3.17
CCDC58Q4VC31 MIR5009-201ENST00000578736 100 ntBASIC-4.72□□□□□ -3.17
CCDC58Q4VC31 RNU6-624P-201ENST00000363411 107 ntBASIC-4.73□□□□□ -3.17
CCDC58Q4VC31 AL158147.1-201ENST00000443970 75 ntBASIC-4.73□□□□□ -3.17
CCDC58Q4VC31 AL451105.1-201ENST00000450005 189 ntBASIC-4.73□□□□□ -3.17
CCDC58Q4VC31 DNAJC19P2-201ENST00000593340 302 ntBASIC-4.73□□□□□ -3.17
CCDC58Q4VC31 SNORA63-201ENST00000363450 132 ntBASIC-4.74□□□□□ -3.17
CCDC58Q4VC31 MIR519C-201ENST00000385053 87 ntBASIC-4.74□□□□□ -3.17
CCDC58Q4VC31 RNU7-197P-201ENST00000458836 62 ntBASIC-4.74□□□□□ -3.17
CCDC58Q4VC31 RNU6-822P-201ENST00000362707 106 ntBASIC-4.75□□□□□ -3.17
CCDC58Q4VC31 RNU6-665P-201ENST00000384639 107 ntBASIC-4.75□□□□□ -3.17
CCDC58Q4VC31 MIR124-1-201ENST00000385275 85 ntBASIC-4.76□□□□□ -3.17
CCDC58Q4VC31 RNU6-239P-201ENST00000390990 99 ntBASIC-4.76□□□□□ -3.17
CCDC58Q4VC31 RNU6-402P-201ENST00000410678 103 ntBASIC-4.76□□□□□ -3.17
CCDC58Q4VC31 RNU6-231P-201ENST00000517122 103 ntBASIC-4.77□□□□□ -3.17
CCDC58Q4VC31 SNORD116.2-201ENST00000391251 93 ntBASIC-4.78□□□□□ -3.17
CCDC58Q4VC31 MIR548F1-201ENST00000408667 84 ntBASIC-4.78□□□□□ -3.17
CCDC58Q4VC31 MIR8053-201ENST00000613344 75 ntBASIC-4.78□□□□□ -3.17
CCDC58Q4VC31 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.79□□□□□ -3.18
CCDC58Q4VC31 RNU6-742P-201ENST00000365289 107 ntBASIC-4.79□□□□□ -3.18
CCDC58Q4VC31 Y_RNA.532-201ENST00000384590 113 ntBASIC-4.79□□□□□ -3.18
CCDC58Q4VC31 SNORA40B-201ENST00000385573 128 ntBASIC-4.79□□□□□ -3.18
CCDC58Q4VC31 TMSB4XP3-201ENST00000445144 114 ntBASIC-4.79□□□□□ -3.18
CCDC58Q4VC31 Y_RNA.17-201ENST00000362433 111 ntBASIC-4.8□□□□□ -3.18
CCDC58Q4VC31 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.8□□□□□ -3.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms