Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.28□□□□□ -2.61
HSPG2P98160 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.28□□□□□ -2.61
HSPG2P98160 RNU6-520P-201ENST00000384717 104 ntBASIC-1.28□□□□□ -2.61
HSPG2P98160 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.28□□□□□ -2.61
HSPG2P98160 RNU6-460P-201ENST00000391158 108 ntBASIC-1.28□□□□□ -2.61
HSPG2P98160 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.28□□□□□ -2.61
HSPG2P98160 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.28□□□□□ -2.61
HSPG2P98160 RNY3P16-201ENST00000516338 101 ntBASIC-1.28□□□□□ -2.61
HSPG2P98160 RNU6-506P-201ENST00000516553 94 ntBASIC-1.28□□□□□ -2.61
HSPG2P98160 AP001340.1-201ENST00000624405 217 ntBASIC-1.28□□□□□ -2.61
HSPG2P98160 RNU7-61P-201ENST00000515897 61 ntBASIC-1.29□□□□□ -2.62
HSPG2P98160 AL359920.1-201ENST00000618332 176 ntBASIC-1.29□□□□□ -2.62
HSPG2P98160 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.29□□□□□ -2.62
HSPG2P98160 SNORD45.1-201ENST00000363181 77 ntBASIC-1.29□□□□□ -2.62
HSPG2P98160 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.29□□□□□ -2.62
HSPG2P98160 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.29□□□□□ -2.62
HSPG2P98160 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.29□□□□□ -2.62
HSPG2P98160 MIR1252-201ENST00000408861 65 ntBASIC-1.29□□□□□ -2.62
HSPG2P98160 RNU6-737P-201ENST00000365370 107 ntBASIC-1.29□□□□□ -2.62
HSPG2P98160 RNU6-239P-201ENST00000390990 99 ntBASIC-1.29□□□□□ -2.62
HSPG2P98160 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.29□□□□□ -2.62
HSPG2P98160 AC090582.1-201ENST00000636321 199 ntBASIC-1.29□□□□□ -2.62
HSPG2P98160 MIR519C-201ENST00000385053 87 ntBASIC-1.3□□□□□ -2.62
HSPG2P98160 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.3□□□□□ -2.62
HSPG2P98160 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.3□□□□□ -2.62
HSPG2P98160 AL035470.1-201ENST00000622571 220 ntBASIC-1.3□□□□□ -2.62
HSPG2P98160 RNU6-604P-201ENST00000390917 100 ntBASIC-1.3□□□□□ -2.62
HSPG2P98160 RNU6-530P-201ENST00000391180 107 ntBASIC-1.3□□□□□ -2.62
HSPG2P98160 RNU6-172P-201ENST00000411000 93 ntBASIC-1.3□□□□□ -2.62
HSPG2P98160 MTND4LP32-201ENST00000636111 270 ntBASIC-1.3□□□□□ -2.62
HSPG2P98160 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-1.3□□□□□ -2.62
HSPG2P98160 MIR4643-201ENST00000577473 78 ntBASIC-1.3□□□□□ -2.62
HSPG2P98160 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 SNORD127-201ENST00000458892 86 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 RNU6-92P-201ENST00000605893 104 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 MIR3688-2-201ENST00000636963 87 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 MIR4426-201ENST00000640330 63 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 RNU6-789P-201ENST00000517105 102 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 RNU6-988P-201ENST00000519081 107 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 RNU6-275P-201ENST00000364910 107 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 MIR1254-1-201ENST00000408257 97 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 AC093729.1-201ENST00000513074 128 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 RNU6-277P-201ENST00000516272 106 ntBASIC-1.31□□□□□ -2.62
HSPG2P98160 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.31□□□□□ -2.62
HSPG2P98160 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.32□□□□□ -2.62
HSPG2P98160 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.32□□□□□ -2.62
HSPG2P98160 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.32□□□□□ -2.62
HSPG2P98160 MTND5P22-201ENST00000458380 195 ntBASIC-1.32□□□□□ -2.62
HSPG2P98160 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.32□□□□□ -2.62
HSPG2P98160 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.32□□□□□ -2.62
HSPG2P98160 RNY4P13-201ENST00000384284 96 ntBASIC-1.32□□□□□ -2.62
HSPG2P98160 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.32□□□□□ -2.62
HSPG2P98160 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.32□□□□□ -2.62
HSPG2P98160 RNU6-330P-201ENST00000363015 107 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 U6.104-201ENST00000637979 90 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
HSPG2P98160 AC074348.1-201ENST00000426503 132 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 SNORD113.1-201ENST00000363280 73 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 RNU6-810P-201ENST00000364001 107 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 RNU6-450P-201ENST00000364654 107 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 SNORA8.1-201ENST00000384250 140 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.33□□□□□ -2.62
HSPG2P98160 RNU6-806P-201ENST00000365147 105 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 MTATP8P2-201ENST00000435212 202 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 RNU6-904P-201ENST00000516206 101 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 AC072026.1-201ENST00000605023 201 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 RNU4-11P-201ENST00000365287 132 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 MIR1277-201ENST00000408536 78 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 AL451105.1-201ENST00000450005 189 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 MIR1297-201ENST00000637311 77 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.34□□□□□ -2.62
HSPG2P98160 SNORD60.1-201ENST00000362451 73 ntBASIC-1.35□□□□□ -2.62
HSPG2P98160 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.35□□□□□ -2.62
HSPG2P98160 RNU6-915P-201ENST00000364943 103 ntBASIC-1.35□□□□□ -2.62
HSPG2P98160 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.35□□□□□ -2.62
HSPG2P98160 SNORD58.1-201ENST00000391313 66 ntBASIC-1.35□□□□□ -2.62
HSPG2P98160 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.35□□□□□ -2.62
HSPG2P98160 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.35□□□□□ -2.63
HSPG2P98160 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.35□□□□□ -2.63
HSPG2P98160 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.35□□□□□ -2.63
HSPG2P98160 AL160413.1-201ENST00000622780 310 ntBASIC-1.35□□□□□ -2.63
HSPG2P98160 MIR4317-201ENST00000637586 65 ntBASIC-1.35□□□□□ -2.63
HSPG2P98160 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.35□□□□□ -2.63
HSPG2P98160 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 RNU6-162P-201ENST00000516228 103 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms