Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC114755.3-201ENST00000481111 251 ntBASIC-0.46□□□□□ -2.48
HDAC4P56524 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.47□□□□□ -2.48
HDAC4P56524 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.47□□□□□ -2.48
HDAC4P56524 MIR6854-201ENST00000614935 69 ntBASIC-0.47□□□□□ -2.48
HDAC4P56524 MIR1255B2-201ENST00000408618 67 ntBASIC-0.48□□□□□ -2.49
HDAC4P56524 RNA5SP470-201ENST00000516463 106 ntBASIC-0.48□□□□□ -2.49
HDAC4P56524 SNORD38.3-201ENST00000516599 73 ntBASIC-0.48□□□□□ -2.49
HDAC4P56524 RNU6-807P-201ENST00000516805 107 ntBASIC-0.48□□□□□ -2.49
HDAC4P56524 RNA5SP169-201ENST00000517268 117 ntBASIC-0.48□□□□□ -2.49
HDAC4P56524 SCARNA18B-201ENST00000458806 135 ntBASIC-0.49□□□□□ -2.49
HDAC4P56524 MT-TQ-201ENST00000387372 72 ntBASIC-0.5□□□□□ -2.49
HDAC4P56524 RNU6-604P-201ENST00000390917 100 ntBASIC-0.5□□□□□ -2.49
HDAC4P56524 RNU6-881P-201ENST00000516813 102 ntBASIC-0.5□□□□□ -2.49
HDAC4P56524 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.5□□□□□ -2.49
HDAC4P56524 MIR664A-201ENST00000626086 82 ntBASIC-0.5□□□□□ -2.49
HDAC4P56524 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.51□□□□□ -2.49
HDAC4P56524 RNU6-645P-201ENST00000364649 106 ntBASIC-0.51□□□□□ -2.49
HDAC4P56524 SNORA62.4-201ENST00000365504 151 ntBASIC-0.51□□□□□ -2.49
HDAC4P56524 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.51□□□□□ -2.49
HDAC4P56524 MIR204-201ENST00000385200 110 ntBASIC-0.51□□□□□ -2.49
HDAC4P56524 RNY4P29-201ENST00000410801 97 ntBASIC-0.51□□□□□ -2.49
HDAC4P56524 MIR4464-201ENST00000580818 92 ntBASIC-0.52□□□□□ -2.49
HDAC4P56524 AL353803.5-201ENST00000599815 141 ntBASIC-0.52□□□□□ -2.49
HDAC4P56524 SNORD45.1-201ENST00000363181 77 ntBASIC-0.53□□□□□ -2.49
HDAC4P56524 SNORD74.6-201ENST00000364796 70 ntBASIC-0.53□□□□□ -2.49
HDAC4P56524 MIR518B-201ENST00000385127 83 ntBASIC-0.53□□□□□ -2.49
HDAC4P56524 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.53□□□□□ -2.49
HDAC4P56524 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.53□□□□□ -2.49
HDAC4P56524 AC021146.6-201ENST00000514659 117 ntBASIC-0.53□□□□□ -2.49
HDAC4P56524 RNU6-982P-201ENST00000516216 102 ntBASIC-0.53□□□□□ -2.49
HDAC4P56524 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.53□□□□□ -2.49
HDAC4P56524 SNORA3B-201ENST00000391305 131 ntBASIC-0.54□□□□□ -2.5
HDAC4P56524 U2.7-201ENST00000619197 100 ntBASIC-0.54□□□□□ -2.5
HDAC4P56524 SNORD115-22-201ENST00000364456 82 ntBASIC-0.55□□□□□ -2.5
HDAC4P56524 MIR601-201ENST00000385256 79 ntBASIC-0.55□□□□□ -2.5
HDAC4P56524 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.55□□□□□ -2.5
HDAC4P56524 RNU6-573P-201ENST00000383938 106 ntBASIC-0.56□□□□□ -2.5
HDAC4P56524 MIR519A2-201ENST00000384990 87 ntBASIC-0.56□□□□□ -2.5
HDAC4P56524 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
HDAC4P56524 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.56□□□□□ -2.5
HDAC4P56524 RNU7-154P-201ENST00000516194 62 ntBASIC-0.56□□□□□ -2.5
HDAC4P56524 MIR4436A-201ENST00000585278 85 ntBASIC-0.56□□□□□ -2.5
HDAC4P56524 RNA5SP173-201ENST00000364857 136 ntBASIC-0.57□□□□□ -2.5
HDAC4P56524 SNORA26.2-201ENST00000390922 122 ntBASIC-0.57□□□□□ -2.5
HDAC4P56524 AL021921.1-201ENST00000442774 93 ntBASIC-0.57□□□□□ -2.5
HDAC4P56524 SNORD22.1-201ENST00000516331 125 ntBASIC-0.57□□□□□ -2.5
HDAC4P56524 MIR3179-1-201ENST00000578940 84 ntBASIC-0.57□□□□□ -2.5
HDAC4P56524 MIR3179-2-201ENST00000579107 84 ntBASIC-0.57□□□□□ -2.5
HDAC4P56524 MIR3179-3-201ENST00000579566 84 ntBASIC-0.57□□□□□ -2.5
HDAC4P56524 MIR3179-4-201ENST00000617599 84 ntBASIC-0.57□□□□□ -2.5
HDAC4P56524 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.57□□□□□ -2.5
HDAC4P56524 MIR6888-201ENST00000621977 67 ntBASIC-0.57□□□□□ -2.5
HDAC4P56524 MIR4679-1-201ENST00000637619 75 ntBASIC-0.57□□□□□ -2.5
HDAC4P56524 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.58□□□□□ -2.5
HDAC4P56524 RNU6-721P-201ENST00000410155 105 ntBASIC-0.58□□□□□ -2.5
HDAC4P56524 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.59□□□□□ -2.5
HDAC4P56524 RNU6-518P-201ENST00000516056 96 ntBASIC-0.59□□□□□ -2.5
HDAC4P56524 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.59□□□□□ -2.5
HDAC4P56524 MIR8053-201ENST00000613344 75 ntBASIC-0.59□□□□□ -2.5
HDAC4P56524 MIR548AG1-201ENST00000579932 66 ntBASIC-0.6□□□□□ -2.51
HDAC4P56524 AL445584.3-201ENST00000617173 78 ntBASIC-0.6□□□□□ -2.51
HDAC4P56524 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.61□□□□□ -2.51
HDAC4P56524 MIR587-201ENST00000384845 96 ntBASIC-0.61□□□□□ -2.51
HDAC4P56524 MIR4320-201ENST00000636981 65 ntBASIC-0.61□□□□□ -2.51
HDAC4P56524 SNORD45A-201ENST00000384512 84 ntBASIC-0.62□□□□□ -2.51
HDAC4P56524 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.62□□□□□ -2.51
HDAC4P56524 SCARNA17-201ENST00000516183 144 ntBASIC-0.62□□□□□ -2.51
HDAC4P56524 MIR3134-201ENST00000579433 74 ntBASIC-0.62□□□□□ -2.51
HDAC4P56524 MIR198-201ENST00000637333 62 ntBASIC-0.62□□□□□ -2.51
HDAC4P56524 RNU6-228P-201ENST00000362700 106 ntBASIC-0.63□□□□□ -2.51
HDAC4P56524 SNORD113.1-201ENST00000363280 73 ntBASIC-0.63□□□□□ -2.51
HDAC4P56524 MIR124-2-201ENST00000385081 109 ntBASIC-0.63□□□□□ -2.51
HDAC4P56524 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.64□□□□□ -2.51
HDAC4P56524 AP000533.3-201ENST00000447704 118 ntBASIC-0.64□□□□□ -2.51
HDAC4P56524 RNU6-70P-201ENST00000516438 60 ntBASIC-0.64□□□□□ -2.51
HDAC4P56524 MIR3202-2-201ENST00000635980 79 ntBASIC-0.64□□□□□ -2.51
HDAC4P56524 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.65□□□□□ -2.51
HDAC4P56524 MIR1302-4-201ENST00000408701 150 ntBASIC-0.65□□□□□ -2.51
HDAC4P56524 MTND4LP1-201ENST00000446263 157 ntBASIC-0.65□□□□□ -2.51
HDAC4P56524 RNU7-174P-201ENST00000516248 59 ntBASIC-0.65□□□□□ -2.51
HDAC4P56524 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.65□□□□□ -2.51
HDAC4P56524 U4.2-201ENST00000618561 85 ntBASIC-0.65□□□□□ -2.51
HDAC4P56524 MIR548C-201ENST00000384815 97 ntBASIC-0.66□□□□□ -2.52
HDAC4P56524 SNORD18.2-201ENST00000459604 70 ntBASIC-0.66□□□□□ -2.52
HDAC4P56524 MIR4324-201ENST00000584846 72 ntBASIC-0.66□□□□□ -2.52
HDAC4P56524 MIR6738-201ENST00000619620 64 ntBASIC-0.66□□□□□ -2.52
HDAC4P56524 RNU6-10P-201ENST00000384036 107 ntBASIC-0.67□□□□□ -2.52
HDAC4P56524 MIR517B-201ENST00000385102 67 ntBASIC-0.67□□□□□ -2.52
HDAC4P56524 MIR1255A-201ENST00000408338 113 ntBASIC-0.67□□□□□ -2.52
HDAC4P56524 RNU6-924P-201ENST00000362926 108 ntBASIC-0.68□□□□□ -2.52
HDAC4P56524 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.68□□□□□ -2.52
HDAC4P56524 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.68□□□□□ -2.52
HDAC4P56524 MIR1207-201ENST00000408249 87 ntBASIC-0.68□□□□□ -2.52
HDAC4P56524 RNU6-687P-201ENST00000516443 89 ntBASIC-0.68□□□□□ -2.52
HDAC4P56524 SNORD115-31-201ENST00000365318 82 ntBASIC-0.69□□□□□ -2.52
HDAC4P56524 RNU6-587P-201ENST00000391282 106 ntBASIC-0.69□□□□□ -2.52
HDAC4P56524 MIR147A-201ENST00000385079 72 ntBASIC-0.7□□□□□ -2.52
HDAC4P56524 MIR196A1-201ENST00000388006 70 ntBASIC-0.7□□□□□ -2.52
HDAC4P56524 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
HDAC4P56524 RNA5SP215-201ENST00000363440 122 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms