Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.96□□□□□ -2.72
RFC3P40938 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.96□□□□□ -2.72
RFC3P40938 AL450471.1-201ENST00000447509 127 ntBASIC-1.96□□□□□ -2.72
RFC3P40938 RNA5SP93-201ENST00000362525 114 ntBASIC-1.97□□□□□ -2.72
RFC3P40938 RNU7-200P-201ENST00000516105 62 ntBASIC-1.97□□□□□ -2.72
RFC3P40938 RNU4-88P-201ENST00000411220 86 ntBASIC-1.98□□□□□ -2.73
RFC3P40938 RNU6-971P-201ENST00000516920 106 ntBASIC-1.98□□□□□ -2.73
RFC3P40938 RNU6-537P-201ENST00000517277 103 ntBASIC-1.98□□□□□ -2.73
RFC3P40938 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.99□□□□□ -2.73
RFC3P40938 RNU6-656P-201ENST00000516785 107 ntBASIC-1.99□□□□□ -2.73
RFC3P40938 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.99□□□□□ -2.73
RFC3P40938 RNU6-1107P-201ENST00000364817 104 ntBASIC-2□□□□□ -2.73
RFC3P40938 MIR548AM-201ENST00000584298 74 ntBASIC-2□□□□□ -2.73
RFC3P40938 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2□□□□□ -2.73
RFC3P40938 RNU6-340P-201ENST00000364005 107 ntBASIC-2.01□□□□□ -2.73
RFC3P40938 RNU6-681P-201ENST00000364012 104 ntBASIC-2.01□□□□□ -2.73
RFC3P40938 MIR548C-201ENST00000384815 97 ntBASIC-2.01□□□□□ -2.73
RFC3P40938 RNU6-695P-201ENST00000391157 104 ntBASIC-2.01□□□□□ -2.73
RFC3P40938 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.01□□□□□ -2.73
RFC3P40938 RNU6-659P-201ENST00000516454 104 ntBASIC-2.01□□□□□ -2.73
RFC3P40938 RNU7-153P-201ENST00000516455 62 ntBASIC-2.01□□□□□ -2.73
RFC3P40938 U2.7-201ENST00000619197 100 ntBASIC-2.01□□□□□ -2.73
RFC3P40938 RNU6-478P-201ENST00000363904 110 ntBASIC-2.02□□□□□ -2.73
RFC3P40938 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.02□□□□□ -2.73
RFC3P40938 RNU6-807P-201ENST00000516805 107 ntBASIC-2.02□□□□□ -2.73
RFC3P40938 RNU6-841P-201ENST00000383872 107 ntBASIC-2.03□□□□□ -2.73
RFC3P40938 AL035461.1-201ENST00000421490 332 ntBASIC-2.03□□□□□ -2.73
RFC3P40938 MIR3123-201ENST00000583417 75 ntBASIC-2.03□□□□□ -2.73
RFC3P40938 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.04□□□□□ -2.74
RFC3P40938 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.04□□□□□ -2.74
RFC3P40938 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.05□□□□□ -2.74
RFC3P40938 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.05□□□□□ -2.74
RFC3P40938 RNU7-61P-201ENST00000515897 61 ntBASIC-2.05□□□□□ -2.74
RFC3P40938 RNU6-608P-201ENST00000383927 104 ntBASIC-2.06□□□□□ -2.74
RFC3P40938 RNU6-630P-201ENST00000391258 106 ntBASIC-2.06□□□□□ -2.74
RFC3P40938 SNORD116-21-201ENST00000384507 92 ntBASIC-2.07□□□□□ -2.74
RFC3P40938 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.08□□□□□ -2.74
RFC3P40938 RNY1P5-201ENST00000383890 115 ntBASIC-2.08□□□□□ -2.74
RFC3P40938 RNU6-458P-201ENST00000384179 107 ntBASIC-2.08□□□□□ -2.74
RFC3P40938 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.08□□□□□ -2.74
RFC3P40938 U6.58-201ENST00000613107 107 ntBASIC-2.08□□□□□ -2.74
RFC3P40938 RNU6-645P-201ENST00000364649 106 ntBASIC-2.09□□□□□ -2.74
RFC3P40938 RNU6-696P-201ENST00000390834 107 ntBASIC-2.09□□□□□ -2.74
RFC3P40938 SNORD77.2-201ENST00000391045 68 ntBASIC-2.09□□□□□ -2.74
RFC3P40938 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.09□□□□□ -2.74
RFC3P40938 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.1□□□□□ -2.75
RFC3P40938 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.1□□□□□ -2.75
RFC3P40938 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.1□□□□□ -2.75
RFC3P40938 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.11□□□□□ -2.75
RFC3P40938 MIR590-201ENST00000385008 97 ntBASIC-2.11□□□□□ -2.75
RFC3P40938 MIR1302-5-201ENST00000408164 150 ntBASIC-2.11□□□□□ -2.75
RFC3P40938 RNU6-162P-201ENST00000516228 103 ntBASIC-2.11□□□□□ -2.75
RFC3P40938 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.11□□□□□ -2.75
RFC3P40938 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.12□□□□□ -2.75
RFC3P40938 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.12□□□□□ -2.75
RFC3P40938 MIR520D-201ENST00000385002 87 ntBASIC-2.12□□□□□ -2.75
RFC3P40938 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.12□□□□□ -2.75
RFC3P40938 RNU6-346P-201ENST00000516288 111 ntBASIC-2.12□□□□□ -2.75
RFC3P40938 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.13□□□□□ -2.75
RFC3P40938 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.13□□□□□ -2.75
RFC3P40938 AC120024.2-201ENST00000576526 175 ntBASIC-2.13□□□□□ -2.75
RFC3P40938 U7.3-201ENST00000616123 62 ntBASIC-2.13□□□□□ -2.75
RFC3P40938 MIR519C-201ENST00000385053 87 ntBASIC-2.14□□□□□ -2.75
RFC3P40938 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.14□□□□□ -2.75
RFC3P40938 MIR23C-201ENST00000579846 100 ntBASIC-2.14□□□□□ -2.75
RFC3P40938 MIR466-201ENST00000580653 84 ntBASIC-2.14□□□□□ -2.75
RFC3P40938 RNY4P7-201ENST00000364600 96 ntBASIC-2.15□□□□□ -2.75
RFC3P40938 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.15□□□□□ -2.75
RFC3P40938 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.15□□□□□ -2.75
RFC3P40938 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.16□□□□□ -2.76
RFC3P40938 RNU6-563P-201ENST00000364872 108 ntBASIC-2.16□□□□□ -2.76
RFC3P40938 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.16□□□□□ -2.76
RFC3P40938 MIR4748-201ENST00000578076 82 ntBASIC-2.16□□□□□ -2.76
RFC3P40938 RNU6-258P-201ENST00000390884 101 ntBASIC-2.17□□□□□ -2.76
RFC3P40938 MIR429-201ENST00000362106 83 ntBASIC-2.18□□□□□ -2.76
RFC3P40938 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.18□□□□□ -2.76
RFC3P40938 SNORD116-14-201ENST00000383894 92 ntBASIC-2.18□□□□□ -2.76
RFC3P40938 SNORD116-17-201ENST00000383929 92 ntBASIC-2.18□□□□□ -2.76
RFC3P40938 SNORD116-15-201ENST00000384445 92 ntBASIC-2.18□□□□□ -2.76
RFC3P40938 SNORD116-19-201ENST00000384729 92 ntBASIC-2.18□□□□□ -2.76
RFC3P40938 RNU7-174P-201ENST00000516248 59 ntBASIC-2.18□□□□□ -2.76
RFC3P40938 RNU6-255P-201ENST00000516957 105 ntBASIC-2.18□□□□□ -2.76
RFC3P40938 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.19□□□□□ -2.76
RFC3P40938 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.19□□□□□ -2.76
RFC3P40938 SNORD115-31-201ENST00000365318 82 ntBASIC-2.19□□□□□ -2.76
RFC3P40938 RNU6-598P-201ENST00000364017 105 ntBASIC-2.2□□□□□ -2.76
RFC3P40938 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.2□□□□□ -2.76
RFC3P40938 MTATP8P2-201ENST00000435212 202 ntBASIC-2.2□□□□□ -2.76
RFC3P40938 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.21□□□□□ -2.76
RFC3P40938 RNU6-109P-201ENST00000516364 107 ntBASIC-2.21□□□□□ -2.76
RFC3P40938 RNU6-184P-201ENST00000516514 107 ntBASIC-2.21□□□□□ -2.76
RFC3P40938 RNU6-230P-201ENST00000362457 104 ntBASIC-2.22□□□□□ -2.76
RFC3P40938 SNORD115-37-201ENST00000363768 82 ntBASIC-2.22□□□□□ -2.76
RFC3P40938 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.22□□□□□ -2.76
RFC3P40938 RNU6-907P-201ENST00000390924 102 ntBASIC-2.22□□□□□ -2.76
RFC3P40938 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.22□□□□□ -2.76
RFC3P40938 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.22□□□□□ -2.76
RFC3P40938 U2.18-201ENST00000622185 84 ntBASIC-2.22□□□□□ -2.76
RFC3P40938 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.23□□□□□ -2.77
RFC3P40938 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.24□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms