Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MALAT1.1-201ENST00000618249 95 ntBASIC-1.53□□□□□ -2.65
RFC4P35249 MIR6818-201ENST00000621576 65 ntBASIC-1.53□□□□□ -2.65
RFC4P35249 RNU6-219P-201ENST00000364728 107 ntBASIC-1.54□□□□□ -2.66
RFC4P35249 SNORA40.13-201ENST00000516379 120 ntBASIC-1.54□□□□□ -2.66
RFC4P35249 MIR3115-201ENST00000577915 68 ntBASIC-1.54□□□□□ -2.66
RFC4P35249 MIR548BB-201ENST00000626714 66 ntBASIC-1.54□□□□□ -2.66
RFC4P35249 SNORD19-201ENST00000391191 68 ntBASIC-1.55□□□□□ -2.66
RFC4P35249 RNU6-313P-201ENST00000516317 112 ntBASIC-1.55□□□□□ -2.66
RFC4P35249 AP002795.1-201ENST00000534879 84 ntBASIC-1.55□□□□□ -2.66
RFC4P35249 MIR29B1-201ENST00000385015 81 ntBASIC-1.56□□□□□ -2.66
RFC4P35249 RNY4P18-201ENST00000391107 89 ntBASIC-1.56□□□□□ -2.66
RFC4P35249 RNU6-479P-201ENST00000516348 105 ntBASIC-1.56□□□□□ -2.66
RFC4P35249 RNU6-303P-201ENST00000517091 106 ntBASIC-1.56□□□□□ -2.66
RFC4P35249 RNA5SP26-201ENST00000362406 119 ntBASIC-1.57□□□□□ -2.66
RFC4P35249 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.57□□□□□ -2.66
RFC4P35249 MIR5683-201ENST00000636514 76 ntBASIC-1.57□□□□□ -2.66
RFC4P35249 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.58□□□□□ -2.66
RFC4P35249 SNORA8.1-201ENST00000384250 140 ntBASIC-1.58□□□□□ -2.66
RFC4P35249 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.58□□□□□ -2.66
RFC4P35249 RNU6-982P-201ENST00000516216 102 ntBASIC-1.58□□□□□ -2.66
RFC4P35249 RNU6-557P-201ENST00000516842 110 ntBASIC-1.58□□□□□ -2.66
RFC4P35249 AC132825.6-201ENST00000638861 357 ntBASIC-1.58□□□□□ -2.66
RFC4P35249 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.59□□□□□ -2.66
RFC4P35249 RNU6-686P-201ENST00000364839 107 ntBASIC-1.59□□□□□ -2.66
RFC4P35249 RNU6-576P-201ENST00000390854 102 ntBASIC-1.59□□□□□ -2.66
RFC4P35249 RNU6-604P-201ENST00000390917 100 ntBASIC-1.59□□□□□ -2.66
RFC4P35249 SNORD45.1-201ENST00000363181 77 ntBASIC-1.6□□□□□ -2.67
RFC4P35249 RNU6-497P-201ENST00000365316 104 ntBASIC-1.6□□□□□ -2.67
RFC4P35249 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.6□□□□□ -2.67
RFC4P35249 MIR548Q-201ENST00000408404 100 ntBASIC-1.6□□□□□ -2.67
RFC4P35249 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.6□□□□□ -2.67
RFC4P35249 RNU7-174P-201ENST00000516248 59 ntBASIC-1.6□□□□□ -2.67
RFC4P35249 MIR4490-201ENST00000582647 84 ntBASIC-1.6□□□□□ -2.67
RFC4P35249 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.6□□□□□ -2.67
RFC4P35249 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.6□□□□□ -2.67
RFC4P35249 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.6□□□□□ -2.67
RFC4P35249 RNU6-478P-201ENST00000363904 110 ntBASIC-1.61□□□□□ -2.67
RFC4P35249 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.61□□□□□ -2.67
RFC4P35249 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.61□□□□□ -2.67
RFC4P35249 RPL35AP4-201ENST00000412007 102 ntBASIC-1.62□□□□□ -2.67
RFC4P35249 AC074348.1-201ENST00000426503 132 ntBASIC-1.62□□□□□ -2.67
RFC4P35249 MIR4306-201ENST00000583390 91 ntBASIC-1.62□□□□□ -2.67
RFC4P35249 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.63□□□□□ -2.67
RFC4P35249 MIR488-201ENST00000365739 83 ntBASIC-1.63□□□□□ -2.67
RFC4P35249 RNU6-458P-201ENST00000384179 107 ntBASIC-1.63□□□□□ -2.67
RFC4P35249 MIR4484-201ENST00000582855 83 ntBASIC-1.63□□□□□ -2.67
RFC4P35249 U6.58-201ENST00000613107 107 ntBASIC-1.63□□□□□ -2.67
RFC4P35249 U4.2-201ENST00000618561 85 ntBASIC-1.63□□□□□ -2.67
RFC4P35249 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.64□□□□□ -2.67
RFC4P35249 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.64□□□□□ -2.67
RFC4P35249 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.64□□□□□ -2.67
RFC4P35249 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.64□□□□□ -2.67
RFC4P35249 RNU6-129P-201ENST00000391022 107 ntBASIC-1.64□□□□□ -2.67
RFC4P35249 MIR8485-201ENST00000401372 91 ntBASIC-1.64□□□□□ -2.67
RFC4P35249 MIR3910-1-201ENST00000580936 111 ntBASIC-1.64□□□□□ -2.67
RFC4P35249 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.65□□□□□ -2.67
RFC4P35249 MIR527-201ENST00000385244 85 ntBASIC-1.65□□□□□ -2.67
RFC4P35249 RNA5SP461-201ENST00000516451 104 ntBASIC-1.66□□□□□ -2.68
RFC4P35249 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.67□□□□□ -2.68
RFC4P35249 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.68□□□□□ -2.68
RFC4P35249 SNORA63.4-201ENST00000362763 126 ntBASIC-1.68□□□□□ -2.68
RFC4P35249 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.68□□□□□ -2.68
RFC4P35249 RNU6-587P-201ENST00000391282 106 ntBASIC-1.68□□□□□ -2.68
RFC4P35249 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.69□□□□□ -2.68
RFC4P35249 RNU6-640P-201ENST00000363693 105 ntBASIC-1.69□□□□□ -2.68
RFC4P35249 RNU6-755P-201ENST00000364400 103 ntBASIC-1.69□□□□□ -2.68
RFC4P35249 RNU6-164P-201ENST00000364604 103 ntBASIC-1.69□□□□□ -2.68
RFC4P35249 MIR548V-201ENST00000584165 80 ntBASIC-1.69□□□□□ -2.68
RFC4P35249 AC091912.2-201ENST00000624798 167 ntBASIC-1.69□□□□□ -2.68
RFC4P35249 AC006160.2-201ENST00000637708 154 ntBASIC-1.69□□□□□ -2.68
RFC4P35249 MIR1207-201ENST00000408249 87 ntBASIC-1.7□□□□□ -2.68
RFC4P35249 AC090616.4-201ENST00000448026 115 ntBASIC-1.7□□□□□ -2.68
RFC4P35249 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.7□□□□□ -2.68
RFC4P35249 RNU6-32P-201ENST00000383948 107 ntBASIC-1.71□□□□□ -2.68
RFC4P35249 RNU6-675P-201ENST00000384236 104 ntBASIC-1.71□□□□□ -2.68
RFC4P35249 RNU6-13P-201ENST00000384248 107 ntBASIC-1.71□□□□□ -2.68
RFC4P35249 RNU6-12P-201ENST00000384604 107 ntBASIC-1.71□□□□□ -2.68
RFC4P35249 RNU6-41P-201ENST00000384741 107 ntBASIC-1.71□□□□□ -2.68
RFC4P35249 RNU6-696P-201ENST00000390834 107 ntBASIC-1.71□□□□□ -2.68
RFC4P35249 RNU6-844P-201ENST00000517175 102 ntBASIC-1.71□□□□□ -2.68
RFC4P35249 U4.4-201ENST00000620626 117 ntBASIC-1.71□□□□□ -2.68
RFC4P35249 MIR6874-201ENST00000635894 71 ntBASIC-1.71□□□□□ -2.68
RFC4P35249 RNU6-698P-201ENST00000363523 107 ntBASIC-1.72□□□□□ -2.68
RFC4P35249 RNU6-34P-201ENST00000364874 107 ntBASIC-1.72□□□□□ -2.68
RFC4P35249 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
RFC4P35249 MIR889-201ENST00000401280 79 ntBASIC-1.72□□□□□ -2.68
RFC4P35249 RNU6-147P-201ENST00000383983 107 ntBASIC-1.73□□□□□ -2.69
RFC4P35249 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.73□□□□□ -2.69
RFC4P35249 MIR1297-201ENST00000637311 77 ntBASIC-1.73□□□□□ -2.69
RFC4P35249 MIR429-201ENST00000362106 83 ntBASIC-1.74□□□□□ -2.69
RFC4P35249 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.74□□□□□ -2.69
RFC4P35249 MIR630-201ENST00000384957 97 ntBASIC-1.74□□□□□ -2.69
RFC4P35249 MTND4LP1-201ENST00000446263 157 ntBASIC-1.74□□□□□ -2.69
RFC4P35249 RNU6-706P-201ENST00000517229 104 ntBASIC-1.74□□□□□ -2.69
RFC4P35249 RNU6-598P-201ENST00000364017 105 ntBASIC-1.75□□□□□ -2.69
RFC4P35249 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.75□□□□□ -2.69
RFC4P35249 RNU6-380P-201ENST00000410207 107 ntBASIC-1.75□□□□□ -2.69
RFC4P35249 RNU6-630P-201ENST00000391258 106 ntBASIC-1.76□□□□□ -2.69
RFC4P35249 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.76□□□□□ -2.69
RFC4P35249 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.76□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms