Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.63□□□□□ -2.83
RPA3P35244 SNORD116-21-201ENST00000384507 92 ntBASIC-2.63□□□□□ -2.83
RPA3P35244 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.63□□□□□ -2.83
RPA3P35244 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.63□□□□□ -2.83
RPA3P35244 RNU7-200P-201ENST00000516105 62 ntBASIC-2.63□□□□□ -2.83
RPA3P35244 RNU6-659P-201ENST00000516454 104 ntBASIC-2.63□□□□□ -2.83
RPA3P35244 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.63□□□□□ -2.83
RPA3P35244 RNU6-598P-201ENST00000364017 105 ntBASIC-2.64□□□□□ -2.83
RPA3P35244 RNU6-587P-201ENST00000391282 106 ntBASIC-2.64□□□□□ -2.83
RPA3P35244 RNU6-463P-201ENST00000384340 107 ntBASIC-2.65□□□□□ -2.83
RPA3P35244 RNU6-182P-201ENST00000516970 105 ntBASIC-2.65□□□□□ -2.83
RPA3P35244 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.66□□□□□ -2.84
RPA3P35244 RNU6-886P-201ENST00000384319 105 ntBASIC-2.66□□□□□ -2.84
RPA3P35244 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.66□□□□□ -2.84
RPA3P35244 AC108019.1-201ENST00000512540 175 ntBASIC-2.66□□□□□ -2.84
RPA3P35244 MIR23C-201ENST00000579846 100 ntBASIC-2.66□□□□□ -2.84
RPA3P35244 MIR1302-5-201ENST00000408164 150 ntBASIC-2.67□□□□□ -2.84
RPA3P35244 RNU6-109P-201ENST00000516364 107 ntBASIC-2.67□□□□□ -2.84
RPA3P35244 RNU6-184P-201ENST00000516514 107 ntBASIC-2.67□□□□□ -2.84
RPA3P35244 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.67□□□□□ -2.84
RPA3P35244 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.68□□□□□ -2.84
RPA3P35244 RNU6-330P-201ENST00000363015 107 ntBASIC-2.68□□□□□ -2.84
RPA3P35244 SNORD115-37-201ENST00000363768 82 ntBASIC-2.68□□□□□ -2.84
RPA3P35244 RNU6-695P-201ENST00000391157 104 ntBASIC-2.68□□□□□ -2.84
RPA3P35244 MIR3675-201ENST00000583661 73 ntBASIC-2.68□□□□□ -2.84
RPA3P35244 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.69□□□□□ -2.84
RPA3P35244 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.69□□□□□ -2.84
RPA3P35244 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.69□□□□□ -2.84
RPA3P35244 RNU6-982P-201ENST00000516216 102 ntBASIC-2.69□□□□□ -2.84
RPA3P35244 U2.18-201ENST00000622185 84 ntBASIC-2.69□□□□□ -2.84
RPA3P35244 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.7□□□□□ -2.84
RPA3P35244 MIR1207-201ENST00000408249 87 ntBASIC-2.7□□□□□ -2.84
RPA3P35244 MIR664B-201ENST00000626756 61 ntBASIC-2.7□□□□□ -2.84
RPA3P35244 RNU6-698P-201ENST00000363523 107 ntBASIC-2.71□□□□□ -2.84
RPA3P35244 RNU6-34P-201ENST00000364874 107 ntBASIC-2.71□□□□□ -2.84
RPA3P35244 RNU6-604P-201ENST00000390917 100 ntBASIC-2.71□□□□□ -2.84
RPA3P35244 U4.4-201ENST00000620626 117 ntBASIC-2.71□□□□□ -2.84
RPA3P35244 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.72□□□□□ -2.84
RPA3P35244 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.72□□□□□ -2.84
RPA3P35244 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.72□□□□□ -2.84
RPA3P35244 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.72□□□□□ -2.84
RPA3P35244 RNU6-346P-201ENST00000516288 111 ntBASIC-2.72□□□□□ -2.84
RPA3P35244 AC120024.2-201ENST00000576526 175 ntBASIC-2.72□□□□□ -2.84
RPA3P35244 SNORA8.1-201ENST00000384250 140 ntBASIC-2.73□□□□□ -2.85
RPA3P35244 RNU6-624P-201ENST00000363411 107 ntBASIC-2.74□□□□□ -2.85
RPA3P35244 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.74□□□□□ -2.85
RPA3P35244 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.74□□□□□ -2.85
RPA3P35244 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.74□□□□□ -2.85
RPA3P35244 RNU6-633P-201ENST00000362612 103 ntBASIC-2.75□□□□□ -2.85
RPA3P35244 MTATP8P2-201ENST00000435212 202 ntBASIC-2.75□□□□□ -2.85
RPA3P35244 MIR4756-201ENST00000577874 78 ntBASIC-2.75□□□□□ -2.85
RPA3P35244 MIR3170-201ENST00000582699 77 ntBASIC-2.75□□□□□ -2.85
RPA3P35244 MIR548V-201ENST00000584165 80 ntBASIC-2.75□□□□□ -2.85
RPA3P35244 RNU6-563P-201ENST00000364872 108 ntBASIC-2.76□□□□□ -2.85
RPA3P35244 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.76□□□□□ -2.85
RPA3P35244 RNU6-303P-201ENST00000517091 106 ntBASIC-2.76□□□□□ -2.85
RPA3P35244 SNORD45.1-201ENST00000363181 77 ntBASIC-2.77□□□□□ -2.85
RPA3P35244 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.77□□□□□ -2.85
RPA3P35244 RNY4P27-201ENST00000363341 96 ntBASIC-2.78□□□□□ -2.85
RPA3P35244 MT-TG-201ENST00000387429 68 ntBASIC-2.78□□□□□ -2.85
RPA3P35244 RNU6-554P-201ENST00000410466 106 ntBASIC-2.78□□□□□ -2.85
RPA3P35244 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.78□□□□□ -2.85
RPA3P35244 AC093729.1-201ENST00000513074 128 ntBASIC-2.78□□□□□ -2.85
RPA3P35244 MIR4668-201ENST00000582284 70 ntBASIC-2.79□□□□□ -2.86
RPA3P35244 MIR630-201ENST00000384957 97 ntBASIC-2.8□□□□□ -2.86
RPA3P35244 MIR548AA1-201ENST00000384971 97 ntBASIC-2.8□□□□□ -2.86
RPA3P35244 MIR3123-201ENST00000583417 75 ntBASIC-2.8□□□□□ -2.86
RPA3P35244 RNU6-106P-201ENST00000384405 107 ntBASIC-2.81□□□□□ -2.86
RPA3P35244 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.81□□□□□ -2.86
RPA3P35244 SNORA19-201ENST00000384737 128 ntBASIC-2.81□□□□□ -2.86
RPA3P35244 RNU6-247P-201ENST00000362636 107 ntBASIC-2.82□□□□□ -2.86
RPA3P35244 SNORD116-14-201ENST00000383894 92 ntBASIC-2.82□□□□□ -2.86
RPA3P35244 SNORD116-17-201ENST00000383929 92 ntBASIC-2.82□□□□□ -2.86
RPA3P35244 SNORD116-15-201ENST00000384445 92 ntBASIC-2.82□□□□□ -2.86
RPA3P35244 SNORD116-19-201ENST00000384729 92 ntBASIC-2.82□□□□□ -2.86
RPA3P35244 RNU6-557P-201ENST00000516842 110 ntBASIC-2.83□□□□□ -2.86
RPA3P35244 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.83□□□□□ -2.86
RPA3P35244 RNU6-841P-201ENST00000383872 107 ntBASIC-2.84□□□□□ -2.86
RPA3P35244 RNY1P5-201ENST00000383890 115 ntBASIC-2.84□□□□□ -2.86
RPA3P35244 RNU6-907P-201ENST00000390924 102 ntBASIC-2.84□□□□□ -2.86
RPA3P35244 SNORD113-2-201ENST00000391082 72 ntBASIC-2.84□□□□□ -2.86
RPA3P35244 AC074348.1-201ENST00000426503 132 ntBASIC-2.84□□□□□ -2.86
RPA3P35244 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.85□□□□□ -2.87
RPA3P35244 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.85□□□□□ -2.87
RPA3P35244 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.85□□□□□ -2.87
RPA3P35244 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.85□□□□□ -2.87
RPA3P35244 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.85□□□□□ -2.87
RPA3P35244 RNU6-686P-201ENST00000364839 107 ntBASIC-2.86□□□□□ -2.87
RPA3P35244 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.86□□□□□ -2.87
RPA3P35244 SNORD116-16-201ENST00000384533 92 ntBASIC-2.86□□□□□ -2.87
RPA3P35244 RNU6-258P-201ENST00000390884 101 ntBASIC-2.86□□□□□ -2.87
RPA3P35244 MTND4LP1-201ENST00000446263 157 ntBASIC-2.86□□□□□ -2.87
RPA3P35244 RNU6-255P-201ENST00000516957 105 ntBASIC-2.86□□□□□ -2.87
RPA3P35244 RNU6-694P-201ENST00000364071 147 ntBASIC-2.87□□□□□ -2.87
RPA3P35244 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.87□□□□□ -2.87
RPA3P35244 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.88□□□□□ -2.87
RPA3P35244 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.88□□□□□ -2.87
RPA3P35244 MIR548AM-201ENST00000584298 74 ntBASIC-2.88□□□□□ -2.87
RPA3P35244 RNA5SP215-201ENST00000363440 122 ntBASIC-2.89□□□□□ -2.87
RPA3P35244 RNU6-118P-201ENST00000516552 102 ntBASIC-2.89□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 231 ms