Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 MIR548Q-201ENST00000408404 100 ntBASIC-1.76□□□□□ -2.69
SLC6A1P30531 MTATP8P2-201ENST00000435212 202 ntBASIC-1.77□□□□□ -2.69
SLC6A1P30531 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.78□□□□□ -2.69
SLC6A1P30531 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.78□□□□□ -2.69
SLC6A1P30531 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.78□□□□□ -2.69
SLC6A1P30531 RNU6-458P-201ENST00000384179 107 ntBASIC-1.78□□□□□ -2.69
SLC6A1P30531 U6.58-201ENST00000613107 107 ntBASIC-1.78□□□□□ -2.69
SLC6A1P30531 SNORA19-201ENST00000384737 128 ntBASIC-1.79□□□□□ -2.7
SLC6A1P30531 RNA5SP86-201ENST00000390869 98 ntBASIC-1.79□□□□□ -2.7
SLC6A1P30531 RNU6-633P-201ENST00000362612 103 ntBASIC-1.8□□□□□ -2.7
SLC6A1P30531 SNORD115-37-201ENST00000363768 82 ntBASIC-1.8□□□□□ -2.7
SLC6A1P30531 RNU6-168P-201ENST00000516189 101 ntBASIC-1.8□□□□□ -2.7
SLC6A1P30531 RNU7-174P-201ENST00000516248 59 ntBASIC-1.8□□□□□ -2.7
SLC6A1P30531 MIR4719-201ENST00000585233 84 ntBASIC-1.8□□□□□ -2.7
SLC6A1P30531 RNU6-624P-201ENST00000363411 107 ntBASIC-1.82□□□□□ -2.7
SLC6A1P30531 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.82□□□□□ -2.7
SLC6A1P30531 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.82□□□□□ -2.7
SLC6A1P30531 RNU6-696P-201ENST00000390834 107 ntBASIC-1.82□□□□□ -2.7
SLC6A1P30531 RNU6-330P-201ENST00000363015 107 ntBASIC-1.83□□□□□ -2.7
SLC6A1P30531 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.83□□□□□ -2.7
SLC6A1P30531 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.83□□□□□ -2.7
SLC6A1P30531 MIR4668-201ENST00000582284 70 ntBASIC-1.83□□□□□ -2.7
SLC6A1P30531 RNU6-766P-201ENST00000362478 107 ntBASIC-1.84□□□□□ -2.7
SLC6A1P30531 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.84□□□□□ -2.7
SLC6A1P30531 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.84□□□□□ -2.7
SLC6A1P30531 RNU6-540P-201ENST00000384622 101 ntBASIC-1.84□□□□□ -2.7
SLC6A1P30531 MIR548H1-201ENST00000408610 102 ntBASIC-1.84□□□□□ -2.7
SLC6A1P30531 SNORA8.1-201ENST00000384250 140 ntBASIC-1.85□□□□□ -2.71
SLC6A1P30531 RNU6-604P-201ENST00000390917 100 ntBASIC-1.85□□□□□ -2.71
SLC6A1P30531 AC018880.2-201ENST00000414265 201 ntBASIC-1.85□□□□□ -2.71
SLC6A1P30531 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.85□□□□□ -2.71
SLC6A1P30531 MIR3675-201ENST00000583661 73 ntBASIC-1.85□□□□□ -2.71
SLC6A1P30531 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.86□□□□□ -2.71
SLC6A1P30531 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.86□□□□□ -2.71
SLC6A1P30531 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.86□□□□□ -2.71
SLC6A1P30531 AC093729.1-201ENST00000513074 128 ntBASIC-1.86□□□□□ -2.71
SLC6A1P30531 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.86□□□□□ -2.71
SLC6A1P30531 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.87□□□□□ -2.71
SLC6A1P30531 RNU6-704P-201ENST00000364162 103 ntBASIC-1.87□□□□□ -2.71
SLC6A1P30531 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.87□□□□□ -2.71
SLC6A1P30531 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.87□□□□□ -2.71
SLC6A1P30531 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.87□□□□□ -2.71
SLC6A1P30531 RNU6-587P-201ENST00000391282 106 ntBASIC-1.87□□□□□ -2.71
SLC6A1P30531 RNU6-982P-201ENST00000516216 102 ntBASIC-1.87□□□□□ -2.71
SLC6A1P30531 RNU6-303P-201ENST00000517091 106 ntBASIC-1.87□□□□□ -2.71
SLC6A1P30531 MIR429-201ENST00000362106 83 ntBASIC-1.88□□□□□ -2.71
SLC6A1P30531 RNU6-630P-201ENST00000391258 106 ntBASIC-1.88□□□□□ -2.71
SLC6A1P30531 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.88□□□□□ -2.71
SLC6A1P30531 SNORD18.1-201ENST00000363807 70 ntBASIC-1.89□□□□□ -2.71
SLC6A1P30531 RNU6-608P-201ENST00000383927 104 ntBASIC-1.89□□□□□ -2.71
SLC6A1P30531 RNU6-400P-201ENST00000391173 106 ntBASIC-1.89□□□□□ -2.71
SLC6A1P30531 RNU6-557P-201ENST00000516842 110 ntBASIC-1.89□□□□□ -2.71
SLC6A1P30531 AC090425.1-201ENST00000610007 140 ntBASIC-1.89□□□□□ -2.71
SLC6A1P30531 RNU6-79P-201ENST00000362511 107 ntBASIC-1.9□□□□□ -2.71
SLC6A1P30531 RNU6-598P-201ENST00000364017 105 ntBASIC-1.9□□□□□ -2.71
SLC6A1P30531 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.9□□□□□ -2.71
SLC6A1P30531 MIR487B-201ENST00000385021 84 ntBASIC-1.9□□□□□ -2.71
SLC6A1P30531 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.9□□□□□ -2.71
SLC6A1P30531 U4.4-201ENST00000620626 117 ntBASIC-1.9□□□□□ -2.71
SLC6A1P30531 RNU6-698P-201ENST00000363523 107 ntBASIC-1.91□□□□□ -2.72
SLC6A1P30531 RNU6-34P-201ENST00000364874 107 ntBASIC-1.91□□□□□ -2.72
SLC6A1P30531 MIR520D-201ENST00000385002 87 ntBASIC-1.91□□□□□ -2.72
SLC6A1P30531 AC074348.1-201ENST00000426503 132 ntBASIC-1.91□□□□□ -2.72
SLC6A1P30531 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.92□□□□□ -2.72
SLC6A1P30531 AC008267.6-201ENST00000441664 139 ntBASIC-1.92□□□□□ -2.72
SLC6A1P30531 RNU6-983P-201ENST00000516004 103 ntBASIC-1.92□□□□□ -2.72
SLC6A1P30531 RNU6-589P-201ENST00000516485 107 ntBASIC-1.92□□□□□ -2.72
SLC6A1P30531 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.92□□□□□ -2.72
SLC6A1P30531 MIR3133-201ENST00000583157 78 ntBASIC-1.92□□□□□ -2.72
SLC6A1P30531 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.92□□□□□ -2.72
SLC6A1P30531 SNORD45.1-201ENST00000363181 77 ntBASIC-1.93□□□□□ -2.72
SLC6A1P30531 RNY4P27-201ENST00000363341 96 ntBASIC-1.93□□□□□ -2.72
SLC6A1P30531 RNU6-219P-201ENST00000364728 107 ntBASIC-1.93□□□□□ -2.72
SLC6A1P30531 RNU6-497P-201ENST00000365316 104 ntBASIC-1.93□□□□□ -2.72
SLC6A1P30531 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.93□□□□□ -2.72
SLC6A1P30531 RNU6-959P-201ENST00000384671 107 ntBASIC-1.93□□□□□ -2.72
SLC6A1P30531 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.93□□□□□ -2.72
SLC6A1P30531 MIR2052-201ENST00000636055 55 ntBASIC-1.93□□□□□ -2.72
SLC6A1P30531 RNU6-686P-201ENST00000364839 107 ntBASIC-1.94□□□□□ -2.72
SLC6A1P30531 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.94□□□□□ -2.72
SLC6A1P30531 SNORD116-22-201ENST00000384430 92 ntBASIC-1.95□□□□□ -2.72
SLC6A1P30531 MIR548V-201ENST00000584165 80 ntBASIC-1.95□□□□□ -2.72
SLC6A1P30531 U2.18-201ENST00000622185 84 ntBASIC-1.95□□□□□ -2.72
SLC6A1P30531 RNU6-228P-201ENST00000362700 106 ntBASIC-1.96□□□□□ -2.72
SLC6A1P30531 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.96□□□□□ -2.72
SLC6A1P30531 RNU6-402P-201ENST00000410678 103 ntBASIC-1.96□□□□□ -2.72
SLC6A1P30531 RNU6-267P-201ENST00000516714 103 ntBASIC-1.96□□□□□ -2.72
SLC6A1P30531 AL365222.1-201ENST00000614661 98 ntBASIC-1.96□□□□□ -2.72
SLC6A1P30531 MIR548BB-201ENST00000626714 66 ntBASIC-1.96□□□□□ -2.72
SLC6A1P30531 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.97□□□□□ -2.72
SLC6A1P30531 RNU6-794P-201ENST00000517261 64 ntBASIC-1.97□□□□□ -2.72
SLC6A1P30531 MALAT1.1-201ENST00000618249 95 ntBASIC-1.99□□□□□ -2.73
SLC6A1P30531 RNU6-1325P-201ENST00000364905 105 ntBASIC-2□□□□□ -2.73
SLC6A1P30531 RNU6-1056P-201ENST00000383996 107 ntBASIC-2□□□□□ -2.73
SLC6A1P30531 MIR630-201ENST00000384957 97 ntBASIC-2□□□□□ -2.73
SLC6A1P30531 RNU6-129P-201ENST00000391022 107 ntBASIC-2□□□□□ -2.73
SLC6A1P30531 MTND4LP1-201ENST00000446263 157 ntBASIC-2□□□□□ -2.73
SLC6A1P30531 MIR4484-201ENST00000582855 83 ntBASIC-2□□□□□ -2.73
SLC6A1P30531 MIR450A1-201ENST00000362262 91 ntBASIC-2.01□□□□□ -2.73
SLC6A1P30531 AL031737.1-201ENST00000450125 223 ntBASIC-2.01□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms