Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RNU6-81P-201ENST00000365608 104 ntBASIC-2.3□□□□□ -2.78
HMGB1P09429 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.3□□□□□ -2.78
HMGB1P09429 AC018880.2-201ENST00000414265 201 ntBASIC-2.3□□□□□ -2.78
HMGB1P09429 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.3□□□□□ -2.78
HMGB1P09429 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.3□□□□□ -2.78
HMGB1P09429 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.3□□□□□ -2.78
HMGB1P09429 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.31□□□□□ -2.78
HMGB1P09429 RNU6-246P-201ENST00000384702 107 ntBASIC-2.31□□□□□ -2.78
HMGB1P09429 RNA5SP86-201ENST00000390869 98 ntBASIC-2.31□□□□□ -2.78
HMGB1P09429 RNU6-400P-201ENST00000391173 106 ntBASIC-2.31□□□□□ -2.78
HMGB1P09429 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.31□□□□□ -2.78
HMGB1P09429 RNU6-340P-201ENST00000364005 107 ntBASIC-2.33□□□□□ -2.78
HMGB1P09429 SNORD77.2-201ENST00000391045 68 ntBASIC-2.33□□□□□ -2.78
HMGB1P09429 MIR548Q-201ENST00000408404 100 ntBASIC-2.33□□□□□ -2.78
HMGB1P09429 SNORD115-37-201ENST00000363768 82 ntBASIC-2.34□□□□□ -2.78
HMGB1P09429 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.34□□□□□ -2.78
HMGB1P09429 RNU6-983P-201ENST00000516004 103 ntBASIC-2.34□□□□□ -2.78
HMGB1P09429 RNU6-589P-201ENST00000516485 107 ntBASIC-2.34□□□□□ -2.78
HMGB1P09429 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.34□□□□□ -2.78
HMGB1P09429 MIR548AG1-201ENST00000579932 66 ntBASIC-2.34□□□□□ -2.78
HMGB1P09429 MTATP8P2-201ENST00000435212 202 ntBASIC-2.36□□□□□ -2.79
HMGB1P09429 U4.2-201ENST00000618561 85 ntBASIC-2.36□□□□□ -2.79
HMGB1P09429 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.37□□□□□ -2.79
HMGB1P09429 RNU6-540P-201ENST00000384622 101 ntBASIC-2.37□□□□□ -2.79
HMGB1P09429 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.37□□□□□ -2.79
HMGB1P09429 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.37□□□□□ -2.79
HMGB1P09429 RNU6-834P-201ENST00000362367 110 ntBASIC-2.38□□□□□ -2.79
HMGB1P09429 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.38□□□□□ -2.79
HMGB1P09429 MIR548M-201ENST00000408260 86 ntBASIC-2.39□□□□□ -2.79
HMGB1P09429 MIR2052-201ENST00000636055 55 ntBASIC-2.39□□□□□ -2.79
HMGB1P09429 RNU6-79P-201ENST00000362511 107 ntBASIC-2.4□□□□□ -2.79
HMGB1P09429 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.4□□□□□ -2.79
HMGB1P09429 MT-TR-201ENST00000387439 65 ntBASIC-2.4□□□□□ -2.79
HMGB1P09429 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.4□□□□□ -2.79
HMGB1P09429 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.4□□□□□ -2.79
HMGB1P09429 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.41□□□□□ -2.8
HMGB1P09429 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.41□□□□□ -2.8
HMGB1P09429 SNORD114-3-201ENST00000364969 75 ntBASIC-2.42□□□□□ -2.8
HMGB1P09429 RNU6-22P-201ENST00000384355 107 ntBASIC-2.42□□□□□ -2.8
HMGB1P09429 AL031737.1-201ENST00000450125 223 ntBASIC-2.42□□□□□ -2.8
HMGB1P09429 RNU6-478P-201ENST00000363904 110 ntBASIC-2.43□□□□□ -2.8
HMGB1P09429 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.43□□□□□ -2.8
HMGB1P09429 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.43□□□□□ -2.8
HMGB1P09429 AL035461.1-201ENST00000421490 332 ntBASIC-2.43□□□□□ -2.8
HMGB1P09429 RNU6-807P-201ENST00000516805 107 ntBASIC-2.43□□□□□ -2.8
HMGB1P09429 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.44□□□□□ -2.8
HMGB1P09429 U2.7-201ENST00000619197 100 ntBASIC-2.44□□□□□ -2.8
HMGB1P09429 SNORD18.1-201ENST00000363807 70 ntBASIC-2.45□□□□□ -2.8
HMGB1P09429 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.45□□□□□ -2.8
HMGB1P09429 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.45□□□□□ -2.8
HMGB1P09429 AL627230.5-201ENST00000619807 58 ntBASIC-2.45□□□□□ -2.8
HMGB1P09429 RNU6-656P-201ENST00000516785 107 ntBASIC-2.46□□□□□ -2.8
HMGB1P09429 MIR4668-201ENST00000582284 70 ntBASIC-2.46□□□□□ -2.8
HMGB1P09429 MIR450A1-201ENST00000362262 91 ntBASIC-2.47□□□□□ -2.8
HMGB1P09429 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.47□□□□□ -2.8
HMGB1P09429 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.47□□□□□ -2.8
HMGB1P09429 RNU6-633P-201ENST00000362612 103 ntBASIC-2.48□□□□□ -2.81
HMGB1P09429 RNY4P27-201ENST00000363341 96 ntBASIC-2.48□□□□□ -2.81
HMGB1P09429 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.49□□□□□ -2.81
HMGB1P09429 RNU6-458P-201ENST00000384179 107 ntBASIC-2.49□□□□□ -2.81
HMGB1P09429 U6.58-201ENST00000613107 107 ntBASIC-2.49□□□□□ -2.81
HMGB1P09429 RNU6-608P-201ENST00000383927 104 ntBASIC-2.5□□□□□ -2.81
HMGB1P09429 MIR487B-201ENST00000385021 84 ntBASIC-2.5□□□□□ -2.81
HMGB1P09429 RNU6-696P-201ENST00000390834 107 ntBASIC-2.5□□□□□ -2.81
HMGB1P09429 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.51□□□□□ -2.81
HMGB1P09429 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.51□□□□□ -2.81
HMGB1P09429 RNU6-313P-201ENST00000516317 112 ntBASIC-2.51□□□□□ -2.81
HMGB1P09429 RNU6-695P-201ENST00000391157 104 ntBASIC-2.52□□□□□ -2.81
HMGB1P09429 RNU6-630P-201ENST00000391258 106 ntBASIC-2.52□□□□□ -2.81
HMGB1P09429 MIR23C-201ENST00000579846 100 ntBASIC-2.52□□□□□ -2.81
HMGB1P09429 MIR548C-201ENST00000384815 97 ntBASIC-2.53□□□□□ -2.81
HMGB1P09429 AC093729.1-201ENST00000513074 128 ntBASIC-2.53□□□□□ -2.81
HMGB1P09429 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.54□□□□□ -2.82
HMGB1P09429 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.55□□□□□ -2.82
HMGB1P09429 SNORD116-22-201ENST00000384430 92 ntBASIC-2.56□□□□□ -2.82
HMGB1P09429 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.56□□□□□ -2.82
HMGB1P09429 MIR429-201ENST00000362106 83 ntBASIC-2.57□□□□□ -2.82
HMGB1P09429 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.58□□□□□ -2.82
HMGB1P09429 RNU6-645P-201ENST00000364649 106 ntBASIC-2.58□□□□□ -2.82
HMGB1P09429 SNORA40.13-201ENST00000516379 120 ntBASIC-2.58□□□□□ -2.82
HMGB1P09429 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.59□□□□□ -2.82
HMGB1P09429 MIR520D-201ENST00000385002 87 ntBASIC-2.59□□□□□ -2.82
HMGB1P09429 RNU6-228P-201ENST00000362700 106 ntBASIC-2.6□□□□□ -2.83
HMGB1P09429 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.6□□□□□ -2.83
HMGB1P09429 AC108019.1-201ENST00000512540 175 ntBASIC-2.6□□□□□ -2.83
HMGB1P09429 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.62□□□□□ -2.83
HMGB1P09429 RNU7-174P-201ENST00000516248 59 ntBASIC-2.62□□□□□ -2.83
HMGB1P09429 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.63□□□□□ -2.83
HMGB1P09429 RNU6-841P-201ENST00000383872 107 ntBASIC-2.63□□□□□ -2.83
HMGB1P09429 AC120024.2-201ENST00000576526 175 ntBASIC-2.63□□□□□ -2.83
HMGB1P09429 MIR3123-201ENST00000583417 75 ntBASIC-2.63□□□□□ -2.83
HMGB1P09429 MALAT1.1-201ENST00000618249 95 ntBASIC-2.63□□□□□ -2.83
HMGB1P09429 MIR1207-201ENST00000408249 87 ntBASIC-2.64□□□□□ -2.83
HMGB1P09429 AP001318.4-201ENST00000616637 121 ntBASIC-2.64□□□□□ -2.83
HMGB1P09429 RNU6-624P-201ENST00000363411 107 ntBASIC-2.65□□□□□ -2.83
HMGB1P09429 RNU6-598P-201ENST00000364017 105 ntBASIC-2.65□□□□□ -2.83
HMGB1P09429 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.66□□□□□ -2.84
HMGB1P09429 RNU6-402P-201ENST00000410678 103 ntBASIC-2.66□□□□□ -2.84
HMGB1P09429 RNU6-587P-201ENST00000391282 106 ntBASIC-2.67□□□□□ -2.84
HMGB1P09429 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.68□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms