Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RNU6-645P-201ENST00000364649 106 ntBASIC-1.03□□□□□ -2.57
RTN3O95197 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.03□□□□□ -2.57
RTN3O95197 SNORD19-201ENST00000391191 68 ntBASIC-1.03□□□□□ -2.57
RTN3O95197 MIR1285-2-201ENST00000408311 88 ntBASIC-1.03□□□□□ -2.57
RTN3O95197 RNA5SP26-201ENST00000362406 119 ntBASIC-1.04□□□□□ -2.58
RTN3O95197 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.04□□□□□ -2.58
RTN3O95197 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.04□□□□□ -2.58
RTN3O95197 AL021921.1-201ENST00000442774 93 ntBASIC-1.04□□□□□ -2.58
RTN3O95197 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.04□□□□□ -2.58
RTN3O95197 MIR4441-201ENST00000582623 100 ntBASIC-1.04□□□□□ -2.58
RTN3O95197 RNU6-624P-201ENST00000363411 107 ntBASIC-1.05□□□□□ -2.58
RTN3O95197 RNU6-219P-201ENST00000364728 107 ntBASIC-1.05□□□□□ -2.58
RTN3O95197 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.05□□□□□ -2.58
RTN3O95197 RNU6-732P-201ENST00000516033 103 ntBASIC-1.05□□□□□ -2.58
RTN3O95197 MIR6818-201ENST00000621576 65 ntBASIC-1.05□□□□□ -2.58
RTN3O95197 RNU6-681P-201ENST00000364012 104 ntBASIC-1.06□□□□□ -2.58
RTN3O95197 RNU6-497P-201ENST00000365316 104 ntBASIC-1.06□□□□□ -2.58
RTN3O95197 MIR8485-201ENST00000401372 91 ntBASIC-1.06□□□□□ -2.58
RTN3O95197 RNA5SP180-201ENST00000516181 101 ntBASIC-1.06□□□□□ -2.58
RTN3O95197 SNORA40.13-201ENST00000516379 120 ntBASIC-1.06□□□□□ -2.58
RTN3O95197 SNORD115-37-201ENST00000363768 82 ntBASIC-1.07□□□□□ -2.58
RTN3O95197 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.07□□□□□ -2.58
RTN3O95197 MIR507-201ENST00000385234 94 ntBASIC-1.07□□□□□ -2.58
RTN3O95197 RNU6-402P-201ENST00000410678 103 ntBASIC-1.07□□□□□ -2.58
RTN3O95197 RNU6-982P-201ENST00000516216 102 ntBASIC-1.07□□□□□ -2.58
RTN3O95197 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.07□□□□□ -2.58
RTN3O95197 RPL35AP4-201ENST00000412007 102 ntBASIC-1.08□□□□□ -2.58
RTN3O95197 AC093729.1-201ENST00000513074 128 ntBASIC-1.08□□□□□ -2.58
RTN3O95197 AP001318.4-201ENST00000616637 121 ntBASIC-1.08□□□□□ -2.58
RTN3O95197 RNU6-478P-201ENST00000363904 110 ntBASIC-1.09□□□□□ -2.58
RTN3O95197 RNU6-755P-201ENST00000364400 103 ntBASIC-1.09□□□□□ -2.58
RTN3O95197 MIR488-201ENST00000365739 83 ntBASIC-1.09□□□□□ -2.58
RTN3O95197 MIR548C-201ENST00000384815 97 ntBASIC-1.09□□□□□ -2.58
RTN3O95197 AL606753.1-201ENST00000427435 87 ntBASIC-1.09□□□□□ -2.58
RTN3O95197 AL353691.2-201ENST00000443795 59 ntBASIC-1.09□□□□□ -2.58
RTN3O95197 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.09□□□□□ -2.58
RTN3O95197 MALAT1.1-201ENST00000618249 95 ntBASIC-1.09□□□□□ -2.58
RTN3O95197 MIR548BB-201ENST00000626714 66 ntBASIC-1.09□□□□□ -2.58
RTN3O95197 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.1□□□□□ -2.59
RTN3O95197 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.1□□□□□ -2.59
RTN3O95197 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.1□□□□□ -2.59
RTN3O95197 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.11□□□□□ -2.59
RTN3O95197 MIR29B1-201ENST00000385015 81 ntBASIC-1.11□□□□□ -2.59
RTN3O95197 RNU6-604P-201ENST00000390917 100 ntBASIC-1.11□□□□□ -2.59
RTN3O95197 RNU7-174P-201ENST00000516248 59 ntBASIC-1.11□□□□□ -2.59
RTN3O95197 RNU6-807P-201ENST00000516805 107 ntBASIC-1.11□□□□□ -2.59
RTN3O95197 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.12□□□□□ -2.59
RTN3O95197 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.12□□□□□ -2.59
RTN3O95197 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.12□□□□□ -2.59
RTN3O95197 RNU4-61P-201ENST00000411243 107 ntBASIC-1.12□□□□□ -2.59
RTN3O95197 RNU6-789P-201ENST00000517105 102 ntBASIC-1.12□□□□□ -2.59
RTN3O95197 MIR3675-201ENST00000583661 73 ntBASIC-1.12□□□□□ -2.59
RTN3O95197 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.12□□□□□ -2.59
RTN3O95197 MIR5683-201ENST00000636514 76 ntBASIC-1.12□□□□□ -2.59
RTN3O95197 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.13□□□□□ -2.59
RTN3O95197 SNORA8.1-201ENST00000384250 140 ntBASIC-1.13□□□□□ -2.59
RTN3O95197 SNORD116-22-201ENST00000384430 92 ntBASIC-1.13□□□□□ -2.59
RTN3O95197 AC074348.1-201ENST00000426503 132 ntBASIC-1.13□□□□□ -2.59
RTN3O95197 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.14□□□□□ -2.59
RTN3O95197 RNU6-458P-201ENST00000384179 107 ntBASIC-1.14□□□□□ -2.59
RTN3O95197 MIR889-201ENST00000401280 79 ntBASIC-1.14□□□□□ -2.59
RTN3O95197 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.14□□□□□ -2.59
RTN3O95197 RNU6-303P-201ENST00000517091 106 ntBASIC-1.14□□□□□ -2.59
RTN3O95197 MIR4484-201ENST00000582855 83 ntBASIC-1.14□□□□□ -2.59
RTN3O95197 MIR4306-201ENST00000583390 91 ntBASIC-1.14□□□□□ -2.59
RTN3O95197 U6.58-201ENST00000613107 107 ntBASIC-1.14□□□□□ -2.59
RTN3O95197 AC091912.2-201ENST00000624798 167 ntBASIC-1.14□□□□□ -2.59
RTN3O95197 MIR6874-201ENST00000635894 71 ntBASIC-1.14□□□□□ -2.59
RTN3O95197 SNORD45.1-201ENST00000363181 77 ntBASIC-1.15□□□□□ -2.59
RTN3O95197 RNU6-640P-201ENST00000363693 105 ntBASIC-1.15□□□□□ -2.59
RTN3O95197 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.15□□□□□ -2.59
RTN3O95197 AC090616.4-201ENST00000448026 115 ntBASIC-1.15□□□□□ -2.59
RTN3O95197 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.15□□□□□ -2.59
RTN3O95197 RNU6-557P-201ENST00000516842 110 ntBASIC-1.15□□□□□ -2.59
RTN3O95197 U4.4-201ENST00000620626 117 ntBASIC-1.15□□□□□ -2.59
RTN3O95197 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.16□□□□□ -2.6
RTN3O95197 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.16□□□□□ -2.6
RTN3O95197 RNU6-587P-201ENST00000391282 106 ntBASIC-1.16□□□□□ -2.6
RTN3O95197 SNORA63.4-201ENST00000362763 126 ntBASIC-1.17□□□□□ -2.6
RTN3O95197 RNY4P27-201ENST00000363341 96 ntBASIC-1.17□□□□□ -2.6
RTN3O95197 RNU6-686P-201ENST00000364839 107 ntBASIC-1.17□□□□□ -2.6
RTN3O95197 RNU6-32P-201ENST00000383948 107 ntBASIC-1.17□□□□□ -2.6
RTN3O95197 RNU6-13P-201ENST00000384248 107 ntBASIC-1.17□□□□□ -2.6
RTN3O95197 RNU6-12P-201ENST00000384604 107 ntBASIC-1.17□□□□□ -2.6
RTN3O95197 RNU6-41P-201ENST00000384741 107 ntBASIC-1.17□□□□□ -2.6
RTN3O95197 MIR527-201ENST00000385244 85 ntBASIC-1.17□□□□□ -2.6
RTN3O95197 RNU6-576P-201ENST00000390854 102 ntBASIC-1.17□□□□□ -2.6
RTN3O95197 MIR548Q-201ENST00000408404 100 ntBASIC-1.17□□□□□ -2.6
RTN3O95197 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.17□□□□□ -2.6
RTN3O95197 MIR664A-201ENST00000626086 82 ntBASIC-1.17□□□□□ -2.6
RTN3O95197 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.18□□□□□ -2.6
RTN3O95197 RNU6-598P-201ENST00000364017 105 ntBASIC-1.18□□□□□ -2.6
RTN3O95197 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.18□□□□□ -2.6
RTN3O95197 MIR4490-201ENST00000582647 84 ntBASIC-1.19□□□□□ -2.6
RTN3O95197 MIR548V-201ENST00000584165 80 ntBASIC-1.19□□□□□ -2.6
RTN3O95197 AC006160.2-201ENST00000637708 154 ntBASIC-1.19□□□□□ -2.6
RTN3O95197 RNU6-164P-201ENST00000364604 103 ntBASIC-1.2□□□□□ -2.6
RTN3O95197 MIR520D-201ENST00000385002 87 ntBASIC-1.2□□□□□ -2.6
RTN3O95197 RNU6-129P-201ENST00000391022 107 ntBASIC-1.2□□□□□ -2.6
RTN3O95197 U2.18-201ENST00000622185 84 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms