Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MIR3675-201ENST00000583661 73 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 RNU6-92P-201ENST00000605893 104 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 SNORD60-201ENST00000383903 83 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 RNU6-918P-201ENST00000391219 106 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 RNU6-587P-201ENST00000391282 106 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 MIR4796-201ENST00000580742 81 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 MIR369-201ENST00000362155 70 ntBASIC-1.24□□□□□ -2.61
CACNA1AO00555 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.24□□□□□ -2.61
CACNA1AO00555 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.24□□□□□ -2.61
CACNA1AO00555 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.24□□□□□ -2.61
CACNA1AO00555 MIR4282-201ENST00000583613 67 ntBASIC-1.24□□□□□ -2.61
CACNA1AO00555 U7.2-201ENST00000607576 63 ntBASIC-1.24□□□□□ -2.61
CACNA1AO00555 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.24□□□□□ -2.61
CACNA1AO00555 RNA5SP173-201ENST00000364857 136 ntBASIC-1.24□□□□□ -2.61
CACNA1AO00555 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.24□□□□□ -2.61
CACNA1AO00555 RNU6-806P-201ENST00000365147 105 ntBASIC-1.24□□□□□ -2.61
CACNA1AO00555 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.24□□□□□ -2.61
CACNA1AO00555 RNU6-971P-201ENST00000516920 106 ntBASIC-1.24□□□□□ -2.61
CACNA1AO00555 MIR3974-201ENST00000637126 96 ntBASIC-1.24□□□□□ -2.61
CACNA1AO00555 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.25□□□□□ -2.61
CACNA1AO00555 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.25□□□□□ -2.61
CACNA1AO00555 U4.5-201ENST00000617137 123 ntBASIC-1.25□□□□□ -2.61
CACNA1AO00555 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.25□□□□□ -2.61
CACNA1AO00555 MIR4426-201ENST00000640330 63 ntBASIC-1.25□□□□□ -2.61
CACNA1AO00555 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.25□□□□□ -2.61
CACNA1AO00555 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.25□□□□□ -2.61
CACNA1AO00555 MT-TL1-201ENST00000386347 75 ntBASIC-1.25□□□□□ -2.61
CACNA1AO00555 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.25□□□□□ -2.61
CACNA1AO00555 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.25□□□□□ -2.61
CACNA1AO00555 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.25□□□□□ -2.61
CACNA1AO00555 SNORD19B-201ENST00000459623 84 ntBASIC-1.25□□□□□ -2.61
CACNA1AO00555 RNU6-904P-201ENST00000516206 101 ntBASIC-1.25□□□□□ -2.61
CACNA1AO00555 AP001340.1-201ENST00000624405 217 ntBASIC-1.25□□□□□ -2.61
CACNA1AO00555 RNU6-330P-201ENST00000363015 107 ntBASIC-1.26□□□□□ -2.61
CACNA1AO00555 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.26□□□□□ -2.61
CACNA1AO00555 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.26□□□□□ -2.61
CACNA1AO00555 RNU6-604P-201ENST00000390917 100 ntBASIC-1.26□□□□□ -2.61
CACNA1AO00555 SNORD58.1-201ENST00000391313 66 ntBASIC-1.26□□□□□ -2.61
CACNA1AO00555 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.26□□□□□ -2.61
CACNA1AO00555 MIR1277-201ENST00000408536 78 ntBASIC-1.26□□□□□ -2.61
CACNA1AO00555 MTND3P3-201ENST00000505004 126 ntBASIC-1.26□□□□□ -2.61
CACNA1AO00555 RNU6-795P-201ENST00000516323 103 ntBASIC-1.26□□□□□ -2.61
CACNA1AO00555 RNU7-160P-201ENST00000516660 62 ntBASIC-1.26□□□□□ -2.61
CACNA1AO00555 MIR3144-201ENST00000579460 79 ntBASIC-1.26□□□□□ -2.61
CACNA1AO00555 AC072026.1-201ENST00000605023 201 ntBASIC-1.26□□□□□ -2.61
CACNA1AO00555 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.26□□□□□ -2.61
CACNA1AO00555 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.27□□□□□ -2.61
CACNA1AO00555 SCARNA23-201ENST00000516060 130 ntBASIC-1.27□□□□□ -2.61
CACNA1AO00555 RNU6-988P-201ENST00000519081 107 ntBASIC-1.27□□□□□ -2.61
CACNA1AO00555 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.27□□□□□ -2.61
CACNA1AO00555 RNU6-686P-201ENST00000364839 107 ntBASIC-1.27□□□□□ -2.61
CACNA1AO00555 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.27□□□□□ -2.61
CACNA1AO00555 SNORD60.1-201ENST00000362451 73 ntBASIC-1.28□□□□□ -2.61
CACNA1AO00555 RNU6-590P-201ENST00000365039 107 ntBASIC-1.28□□□□□ -2.61
CACNA1AO00555 RNU6-668P-201ENST00000364180 107 ntBASIC-1.28□□□□□ -2.61
CACNA1AO00555 SNORA17.4-201ENST00000391287 132 ntBASIC-1.28□□□□□ -2.61
CACNA1AO00555 RNU2-16P-201ENST00000410712 136 ntBASIC-1.28□□□□□ -2.61
CACNA1AO00555 RNU6-172P-201ENST00000411000 93 ntBASIC-1.28□□□□□ -2.61
CACNA1AO00555 AL731768.1-201ENST00000603124 139 ntBASIC-1.28□□□□□ -2.61
CACNA1AO00555 MIR8053-201ENST00000613344 75 ntBASIC-1.28□□□□□ -2.61
CACNA1AO00555 RNU6-822P-201ENST00000362707 106 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 RNU6-755P-201ENST00000364400 103 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 SNORD116-4-201ENST00000384733 96 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 RNY3P8-201ENST00000411366 126 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 AC093729.1-201ENST00000513074 128 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 RNY3P1-201ENST00000365085 102 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 SNORA33.2-201ENST00000365413 134 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.29□□□□□ -2.62
CACNA1AO00555 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.3□□□□□ -2.62
CACNA1AO00555 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.3□□□□□ -2.62
CACNA1AO00555 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.3□□□□□ -2.62
CACNA1AO00555 RNU6-275P-201ENST00000364910 107 ntBASIC-1.3□□□□□ -2.62
CACNA1AO00555 RNU6-300P-201ENST00000459080 104 ntBASIC-1.3□□□□□ -2.62
CACNA1AO00555 AL035470.1-201ENST00000622571 220 ntBASIC-1.3□□□□□ -2.62
CACNA1AO00555 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
CACNA1AO00555 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.31□□□□□ -2.62
CACNA1AO00555 RNU4-40P-201ENST00000364351 143 ntBASIC-1.31□□□□□ -2.62
CACNA1AO00555 RNU6-665P-201ENST00000384639 107 ntBASIC-1.31□□□□□ -2.62
CACNA1AO00555 MIR363-201ENST00000384840 75 ntBASIC-1.31□□□□□ -2.62
CACNA1AO00555 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.31□□□□□ -2.62
CACNA1AO00555 RNA5SP215-201ENST00000363440 122 ntBASIC-1.31□□□□□ -2.62
CACNA1AO00555 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.31□□□□□ -2.62
CACNA1AO00555 RNU6-737P-201ENST00000365370 107 ntBASIC-1.31□□□□□ -2.62
CACNA1AO00555 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.31□□□□□ -2.62
CACNA1AO00555 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.31□□□□□ -2.62
CACNA1AO00555 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.31□□□□□ -2.62
CACNA1AO00555 MIR7110-201ENST00000612638 86 ntBASIC-1.31□□□□□ -2.62
CACNA1AO00555 RNU6-985P-201ENST00000410182 104 ntBASIC-1.32□□□□□ -2.62
CACNA1AO00555 AC074348.1-201ENST00000426503 132 ntBASIC-1.32□□□□□ -2.62
CACNA1AO00555 RNU6-557P-201ENST00000516842 110 ntBASIC-1.32□□□□□ -2.62
CACNA1AO00555 RNU6-176P-201ENST00000517196 105 ntBASIC-1.32□□□□□ -2.62
CACNA1AO00555 MIR8062-201ENST00000621515 85 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms