Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.95□□□□□ -3.04
CHKB-CPT1BH3BT56 Y_RNA.579-201ENST00000390939 94 ntBASIC-3.95□□□□□ -3.04
CHKB-CPT1BH3BT56 RNY4P18-201ENST00000391107 89 ntBASIC-3.95□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.95□□□□□ -3.04
CHKB-CPT1BH3BT56 RNA5SP173-201ENST00000364857 136 ntBASIC-3.96□□□□□ -3.04
CHKB-CPT1BH3BT56 MT-TL1-201ENST00000386347 75 ntBASIC-3.96□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-172P-201ENST00000411000 93 ntBASIC-3.96□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-988P-201ENST00000519081 107 ntBASIC-3.96□□□□□ -3.04
CHKB-CPT1BH3BT56 MIR5009-201ENST00000578736 100 ntBASIC-3.96□□□□□ -3.04
CHKB-CPT1BH3BT56 Y_RNA.58-201ENST00000362807 102 ntBASIC-3.97□□□□□ -3.04
CHKB-CPT1BH3BT56 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.97□□□□□ -3.04
CHKB-CPT1BH3BT56 Y_RNA.194-201ENST00000363985 102 ntBASIC-3.97□□□□□ -3.04
CHKB-CPT1BH3BT56 SNORD58C-201ENST00000365223 64 ntBASIC-3.97□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU4-11P-201ENST00000365287 132 ntBASIC-3.97□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-1219P-201ENST00000516143 112 ntBASIC-3.97□□□□□ -3.04
CHKB-CPT1BH3BT56 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.97□□□□□ -3.04
CHKB-CPT1BH3BT56 MTND2P23-201ENST00000422990 651 ntBASIC-3.98□□□□□ -3.05
CHKB-CPT1BH3BT56 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.98□□□□□ -3.05
CHKB-CPT1BH3BT56 AP001340.1-201ENST00000624405 217 ntBASIC-3.98□□□□□ -3.05
CHKB-CPT1BH3BT56 MIR379-201ENST00000362218 67 ntBASIC-4□□□□□ -3.05
CHKB-CPT1BH3BT56 RNU6-330P-201ENST00000363015 107 ntBASIC-4□□□□□ -3.05
CHKB-CPT1BH3BT56 Y_RNA.96-201ENST00000363092 109 ntBASIC-4□□□□□ -3.05
CHKB-CPT1BH3BT56 SNORA17.4-201ENST00000391287 132 ntBASIC-4□□□□□ -3.05
CHKB-CPT1BH3BT56 AC139792.2-201ENST00000624218 587 ntBASIC-4□□□□□ -3.05
CHKB-CPT1BH3BT56 MIRLET7A3-201ENST00000362116 74 ntBASIC-4.01□□□□□ -3.05
CHKB-CPT1BH3BT56 RNU6-129P-201ENST00000391022 107 ntBASIC-4.01□□□□□ -3.05
CHKB-CPT1BH3BT56 RNU6-876P-201ENST00000391295 104 ntBASIC-4.01□□□□□ -3.05
CHKB-CPT1BH3BT56 MTND4LP1-201ENST00000446263 157 ntBASIC-4.01□□□□□ -3.05
CHKB-CPT1BH3BT56 RNU6-182P-201ENST00000516970 105 ntBASIC-4.01□□□□□ -3.05
CHKB-CPT1BH3BT56 RNU6-361P-201ENST00000364454 107 ntBASIC-4.02□□□□□ -3.05
CHKB-CPT1BH3BT56 SNORA8.1-201ENST00000384250 140 ntBASIC-4.02□□□□□ -3.05
CHKB-CPT1BH3BT56 MIR513C-201ENST00000401352 84 ntBASIC-4.03□□□□□ -3.05
CHKB-CPT1BH3BT56 U6.104-201ENST00000637979 90 ntBASIC-4.03□□□□□ -3.05
CHKB-CPT1BH3BT56 SNORD45.1-201ENST00000363181 77 ntBASIC-4.04□□□□□ -3.06
CHKB-CPT1BH3BT56 RNU6-912P-201ENST00000363800 104 ntBASIC-4.04□□□□□ -3.06
CHKB-CPT1BH3BT56 RNU6-713P-201ENST00000384761 107 ntBASIC-4.04□□□□□ -3.06
CHKB-CPT1BH3BT56 RNU6-530P-201ENST00000391180 107 ntBASIC-4.04□□□□□ -3.06
CHKB-CPT1BH3BT56 Y_RNA.688-201ENST00000516565 95 ntBASIC-4.04□□□□□ -3.06
CHKB-CPT1BH3BT56 Y_RNA.307-201ENST00000365022 117 ntBASIC-4.05□□□□□ -3.06
CHKB-CPT1BH3BT56 RNU7-160P-201ENST00000516660 62 ntBASIC-4.05□□□□□ -3.06
CHKB-CPT1BH3BT56 Y_RNA.158-201ENST00000363651 101 ntBASIC-4.06□□□□□ -3.06
CHKB-CPT1BH3BT56 RNU6-1061P-201ENST00000516530 99 ntBASIC-4.06□□□□□ -3.06
CHKB-CPT1BH3BT56 Y_RNA.511-201ENST00000384514 103 ntBASIC-4.07□□□□□ -3.06
CHKB-CPT1BH3BT56 SNORD58.1-201ENST00000391313 66 ntBASIC-4.07□□□□□ -3.06
CHKB-CPT1BH3BT56 RNU6-68P-201ENST00000516576 104 ntBASIC-4.07□□□□□ -3.06
CHKB-CPT1BH3BT56 SNORA81.3-201ENST00000517283 198 ntBASIC-4.07□□□□□ -3.06
CHKB-CPT1BH3BT56 U7.2-201ENST00000607576 63 ntBASIC-4.07□□□□□ -3.06
CHKB-CPT1BH3BT56 MIR509-1-201ENST00000385265 94 ntBASIC-4.08□□□□□ -3.06
CHKB-CPT1BH3BT56 MIR509-2-201ENST00000390724 91 ntBASIC-4.08□□□□□ -3.06
CHKB-CPT1BH3BT56 RNU6-303P-201ENST00000517091 106 ntBASIC-4.08□□□□□ -3.06
CHKB-CPT1BH3BT56 RNU6-668P-201ENST00000364180 107 ntBASIC-4.09□□□□□ -3.06
CHKB-CPT1BH3BT56 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-4.09□□□□□ -3.06
CHKB-CPT1BH3BT56 MIR548AJ2-201ENST00000408539 92 ntBASIC-4.09□□□□□ -3.06
CHKB-CPT1BH3BT56 SCARNA23-201ENST00000516060 130 ntBASIC-4.09□□□□□ -3.06
CHKB-CPT1BH3BT56 MIR369-201ENST00000362155 70 ntBASIC-4.1□□□□□ -3.07
CHKB-CPT1BH3BT56 Y_RNA.266-201ENST00000364678 96 ntBASIC-4.1□□□□□ -3.07
CHKB-CPT1BH3BT56 SNORD42.2-201ENST00000365570 69 ntBASIC-4.1□□□□□ -3.07
CHKB-CPT1BH3BT56 MIR519C-201ENST00000385053 87 ntBASIC-4.1□□□□□ -3.07
CHKB-CPT1BH3BT56 Y_RNA.69-201ENST00000362885 109 ntBASIC-4.11□□□□□ -3.07
CHKB-CPT1BH3BT56 Y_RNA.434-201ENST00000384090 100 ntBASIC-4.11□□□□□ -3.07
CHKB-CPT1BH3BT56 RNU6-987P-201ENST00000384759 104 ntBASIC-4.11□□□□□ -3.07
CHKB-CPT1BH3BT56 Y_RNA.129-201ENST00000363392 110 ntBASIC-4.12□□□□□ -3.07
CHKB-CPT1BH3BT56 RNU6-624P-201ENST00000363411 107 ntBASIC-4.13□□□□□ -3.07
CHKB-CPT1BH3BT56 RNU6-1020P-201ENST00000363684 107 ntBASIC-4.13□□□□□ -3.07
CHKB-CPT1BH3BT56 SNORD114-13-201ENST00000364377 74 ntBASIC-4.13□□□□□ -3.07
CHKB-CPT1BH3BT56 RNU6-1135P-201ENST00000411083 103 ntBASIC-4.13□□□□□ -3.07
CHKB-CPT1BH3BT56 AC074348.1-201ENST00000426503 132 ntBASIC-4.13□□□□□ -3.07
CHKB-CPT1BH3BT56 RNU6-1227P-201ENST00000383981 107 ntBASIC-4.14□□□□□ -3.07
CHKB-CPT1BH3BT56 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.14□□□□□ -3.07
CHKB-CPT1BH3BT56 RNA5SP106-201ENST00000517274 100 ntBASIC-4.14□□□□□ -3.07
CHKB-CPT1BH3BT56 MIR4680-201ENST00000580906 66 ntBASIC-4.14□□□□□ -3.07
CHKB-CPT1BH3BT56 Y_RNA.612-201ENST00000410717 95 ntBASIC-4.15□□□□□ -3.07
CHKB-CPT1BH3BT56 MIR8062-201ENST00000621515 85 ntBASIC-4.15□□□□□ -3.07
CHKB-CPT1BH3BT56 Y_RNA.63-201ENST00000362841 102 ntBASIC-4.16□□□□□ -3.08
CHKB-CPT1BH3BT56 RNY3P1-201ENST00000365085 102 ntBASIC-4.16□□□□□ -3.08
CHKB-CPT1BH3BT56 RNU6-574P-201ENST00000384265 107 ntBASIC-4.16□□□□□ -3.08
CHKB-CPT1BH3BT56 MIR1254-1-201ENST00000408257 97 ntBASIC-4.18□□□□□ -3.08
CHKB-CPT1BH3BT56 RNU6-904P-201ENST00000516206 101 ntBASIC-4.18□□□□□ -3.08
CHKB-CPT1BH3BT56 AL359920.1-201ENST00000618332 176 ntBASIC-4.18□□□□□ -3.08
CHKB-CPT1BH3BT56 Y_RNA.778-201ENST00000620203 90 ntBASIC-4.18□□□□□ -3.08
CHKB-CPT1BH3BT56 RNU6-554P-201ENST00000410466 106 ntBASIC-4.19□□□□□ -3.08
CHKB-CPT1BH3BT56 SNORD115-37-201ENST00000363768 82 ntBASIC-4.2□□□□□ -3.08
CHKB-CPT1BH3BT56 Y_RNA.318-201ENST00000365131 97 ntBASIC-4.2□□□□□ -3.08
CHKB-CPT1BH3BT56 RNU6-800P-201ENST00000384473 103 ntBASIC-4.21□□□□□ -3.08
CHKB-CPT1BH3BT56 RNU6-557P-201ENST00000516842 110 ntBASIC-4.21□□□□□ -3.08
CHKB-CPT1BH3BT56 AC022559.1-201ENST00000520905 205 ntBASIC-4.21□□□□□ -3.08
CHKB-CPT1BH3BT56 AC141273.2-201ENST00000618989 130 ntBASIC-4.21□□□□□ -3.08
CHKB-CPT1BH3BT56 SNORD113.1-201ENST00000363280 73 ntBASIC-4.22□□□□□ -3.08
CHKB-CPT1BH3BT56 SNORA33.2-201ENST00000365413 134 ntBASIC-4.22□□□□□ -3.08
CHKB-CPT1BH3BT56 Y_RNA.649-201ENST00000459077 103 ntBASIC-4.22□□□□□ -3.08
CHKB-CPT1BH3BT56 RNU7-61P-201ENST00000515897 61 ntBASIC-4.22□□□□□ -3.08
CHKB-CPT1BH3BT56 MIR8053-201ENST00000613344 75 ntBASIC-4.22□□□□□ -3.08
CHKB-CPT1BH3BT56 RNU6-1047P-201ENST00000364418 107 ntBASIC-4.23□□□□□ -3.09
CHKB-CPT1BH3BT56 RNU6-402P-201ENST00000410678 103 ntBASIC-4.23□□□□□ -3.09
CHKB-CPT1BH3BT56 RNU4-71P-201ENST00000516258 113 ntBASIC-4.23□□□□□ -3.09
CHKB-CPT1BH3BT56 Y_RNA.272-201ENST00000364696 102 ntBASIC-4.24□□□□□ -3.09
CHKB-CPT1BH3BT56 Y_RNA.281-201ENST00000364774 94 ntBASIC-4.24□□□□□ -3.09
CHKB-CPT1BH3BT56 RNY4P10-201ENST00000365571 96 ntBASIC-4.24□□□□□ -3.09
CHKB-CPT1BH3BT56 RNU6-345P-201ENST00000517001 107 ntBASIC-4.24□□□□□ -3.09
CHKB-CPT1BH3BT56 AL157777.2-201ENST00000258070 137 ntBASIC-4.25□□□□□ -3.09
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms