Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.59□□□□□ -2.66
VCX3AQ9NNX9 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.59□□□□□ -2.66
VCX3AQ9NNX9 RNU6-880P-201ENST00000384526 107 ntBASIC-1.59□□□□□ -2.66
VCX3AQ9NNX9 RNU7-61P-201ENST00000515897 61 ntBASIC-1.59□□□□□ -2.66
VCX3AQ9NNX9 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.59□□□□□ -2.66
VCX3AQ9NNX9 RNU7-153P-201ENST00000516455 62 ntBASIC-1.59□□□□□ -2.66
VCX3AQ9NNX9 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.59□□□□□ -2.66
VCX3AQ9NNX9 RNU6-886P-201ENST00000384319 105 ntBASIC-1.6□□□□□ -2.67
VCX3AQ9NNX9 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.6□□□□□ -2.67
VCX3AQ9NNX9 RPL35AP4-201ENST00000412007 102 ntBASIC-1.6□□□□□ -2.67
VCX3AQ9NNX9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.6□□□□□ -2.67
VCX3AQ9NNX9 RNU7-200P-201ENST00000516105 62 ntBASIC-1.6□□□□□ -2.67
VCX3AQ9NNX9 RNU6-182P-201ENST00000516970 105 ntBASIC-1.6□□□□□ -2.67
VCX3AQ9NNX9 MIR6502-201ENST00000617296 76 ntBASIC-1.6□□□□□ -2.67
VCX3AQ9NNX9 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.61□□□□□ -2.67
VCX3AQ9NNX9 RNU6-412P-201ENST00000516434 106 ntBASIC-1.61□□□□□ -2.67
VCX3AQ9NNX9 MIR4770-201ENST00000579149 58 ntBASIC-1.61□□□□□ -2.67
VCX3AQ9NNX9 MT-TG-201ENST00000387429 68 ntBASIC-1.62□□□□□ -2.67
VCX3AQ9NNX9 SNORD77.2-201ENST00000391045 68 ntBASIC-1.62□□□□□ -2.67
VCX3AQ9NNX9 AC090616.4-201ENST00000448026 115 ntBASIC-1.62□□□□□ -2.67
VCX3AQ9NNX9 RNU6-659P-201ENST00000516454 104 ntBASIC-1.62□□□□□ -2.67
VCX3AQ9NNX9 RNU6-478P-201ENST00000363904 110 ntBASIC-1.63□□□□□ -2.67
VCX3AQ9NNX9 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.63□□□□□ -2.67
VCX3AQ9NNX9 MIR548Q-201ENST00000408404 100 ntBASIC-1.63□□□□□ -2.67
VCX3AQ9NNX9 RNA5SP67-201ENST00000516422 131 ntBASIC-1.63□□□□□ -2.67
VCX3AQ9NNX9 RNU6-694P-201ENST00000364071 147 ntBASIC-1.64□□□□□ -2.67
VCX3AQ9NNX9 RNU6-168P-201ENST00000516189 101 ntBASIC-1.64□□□□□ -2.67
VCX3AQ9NNX9 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.65□□□□□ -2.67
VCX3AQ9NNX9 SNORD115-27-201ENST00000364430 82 ntBASIC-1.65□□□□□ -2.67
VCX3AQ9NNX9 RNU6-645P-201ENST00000364649 106 ntBASIC-1.65□□□□□ -2.67
VCX3AQ9NNX9 SNORD116-21-201ENST00000384507 92 ntBASIC-1.65□□□□□ -2.67
VCX3AQ9NNX9 MIR590-201ENST00000385008 97 ntBASIC-1.65□□□□□ -2.67
VCX3AQ9NNX9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.65□□□□□ -2.67
VCX3AQ9NNX9 RNU6-162P-201ENST00000516228 103 ntBASIC-1.65□□□□□ -2.67
VCX3AQ9NNX9 RNU6-458P-201ENST00000384179 107 ntBASIC-1.66□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.66□□□□□ -2.68
VCX3AQ9NNX9 MIR548C-201ENST00000384815 97 ntBASIC-1.66□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.66□□□□□ -2.68
VCX3AQ9NNX9 U6.58-201ENST00000613107 107 ntBASIC-1.66□□□□□ -2.68
VCX3AQ9NNX9 MIR6129-201ENST00000616087 109 ntBASIC-1.66□□□□□ -2.68
VCX3AQ9NNX9 U7.3-201ENST00000616123 62 ntBASIC-1.66□□□□□ -2.68
VCX3AQ9NNX9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.66□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.67□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.67□□□□□ -2.68
VCX3AQ9NNX9 AC018880.2-201ENST00000414265 201 ntBASIC-1.67□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.68□□□□□ -2.68
VCX3AQ9NNX9 MIR519C-201ENST00000385053 87 ntBASIC-1.68□□□□□ -2.68
VCX3AQ9NNX9 RNU6-696P-201ENST00000390834 107 ntBASIC-1.68□□□□□ -2.68
VCX3AQ9NNX9 RNU6-400P-201ENST00000391173 106 ntBASIC-1.68□□□□□ -2.68
VCX3AQ9NNX9 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.68□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.7□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.7□□□□□ -2.68
VCX3AQ9NNX9 MIR1302-5-201ENST00000408164 150 ntBASIC-1.7□□□□□ -2.68
VCX3AQ9NNX9 RNU7-174P-201ENST00000516248 59 ntBASIC-1.7□□□□□ -2.68
VCX3AQ9NNX9 RNU6-346P-201ENST00000516288 111 ntBASIC-1.7□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.71□□□□□ -2.68
VCX3AQ9NNX9 RNY1P5-201ENST00000383890 115 ntBASIC-1.71□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.71□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.71□□□□□ -2.68
VCX3AQ9NNX9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.71□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.71□□□□□ -2.68
VCX3AQ9NNX9 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.71□□□□□ -2.68
VCX3AQ9NNX9 MIR429-201ENST00000362106 83 ntBASIC-1.72□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.72□□□□□ -2.68
VCX3AQ9NNX9 MTATP8P2-201ENST00000435212 202 ntBASIC-1.72□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.72□□□□□ -2.68
VCX3AQ9NNX9 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.73□□□□□ -2.69
VCX3AQ9NNX9 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.73□□□□□ -2.69
VCX3AQ9NNX9 SNORD57-201ENST00000448188 72 ntBASIC-1.73□□□□□ -2.69
VCX3AQ9NNX9 RNU6-109P-201ENST00000516364 107 ntBASIC-1.73□□□□□ -2.69
VCX3AQ9NNX9 RNU6-184P-201ENST00000516514 107 ntBASIC-1.73□□□□□ -2.69
VCX3AQ9NNX9 MIR4320-201ENST00000636981 65 ntBASIC-1.73□□□□□ -2.69
VCX3AQ9NNX9 RNU6-79P-201ENST00000362511 107 ntBASIC-1.74□□□□□ -2.69
VCX3AQ9NNX9 SNORD115-37-201ENST00000363768 82 ntBASIC-1.74□□□□□ -2.69
VCX3AQ9NNX9 SNORD116-14-201ENST00000383894 92 ntBASIC-1.74□□□□□ -2.69
VCX3AQ9NNX9 RNU6-608P-201ENST00000383927 104 ntBASIC-1.74□□□□□ -2.69
VCX3AQ9NNX9 SNORD116-17-201ENST00000383929 92 ntBASIC-1.74□□□□□ -2.69
VCX3AQ9NNX9 SNORD116-15-201ENST00000384445 92 ntBASIC-1.74□□□□□ -2.69
VCX3AQ9NNX9 SNORD116-19-201ENST00000384729 92 ntBASIC-1.74□□□□□ -2.69
VCX3AQ9NNX9 RNA5SP86-201ENST00000390869 98 ntBASIC-1.74□□□□□ -2.69
VCX3AQ9NNX9 RNU6-630P-201ENST00000391258 106 ntBASIC-1.74□□□□□ -2.69
VCX3AQ9NNX9 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.74□□□□□ -2.69
VCX3AQ9NNX9 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.75□□□□□ -2.69
VCX3AQ9NNX9 RNU6-554P-201ENST00000410466 106 ntBASIC-1.75□□□□□ -2.69
VCX3AQ9NNX9 RNU6-255P-201ENST00000516957 105 ntBASIC-1.75□□□□□ -2.69
VCX3AQ9NNX9 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.76□□□□□ -2.69
VCX3AQ9NNX9 RNU6-226P-201ENST00000363778 107 ntBASIC-1.76□□□□□ -2.69
VCX3AQ9NNX9 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.76□□□□□ -2.69
VCX3AQ9NNX9 SNORA8.1-201ENST00000384250 140 ntBASIC-1.76□□□□□ -2.69
VCX3AQ9NNX9 RNU6-604P-201ENST00000390917 100 ntBASIC-1.76□□□□□ -2.69
VCX3AQ9NNX9 RNU6-587P-201ENST00000391282 106 ntBASIC-1.76□□□□□ -2.69
VCX3AQ9NNX9 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.76□□□□□ -2.69
VCX3AQ9NNX9 RNU6-633P-201ENST00000362612 103 ntBASIC-1.77□□□□□ -2.69
VCX3AQ9NNX9 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.77□□□□□ -2.69
VCX3AQ9NNX9 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.77□□□□□ -2.69
VCX3AQ9NNX9 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.77□□□□□ -2.69
VCX3AQ9NNX9 MIR520D-201ENST00000385002 87 ntBASIC-1.77□□□□□ -2.69
VCX3AQ9NNX9 MIR548H1-201ENST00000408610 102 ntBASIC-1.77□□□□□ -2.69
VCX3AQ9NNX9 MIR409-201ENST00000362237 79 ntBASIC-1.78□□□□□ -2.69
VCX3AQ9NNX9 RNU6-330P-201ENST00000363015 107 ntBASIC-1.78□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 262.2 ms