Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNU6-493P-201ENST00000391321 108 ntBASIC-6.7□□□□□ -3.48
RPL39P62891 Y_RNA.646-201ENST00000410980 101 ntBASIC-6.7□□□□□ -3.48
RPL39P62891 RNU5E-3P-201ENST00000515913 68 ntBASIC-6.7□□□□□ -3.48
RPL39P62891 Y_RNA.41-201ENST00000362646 102 ntBASIC-6.71□□□□□ -3.48
RPL39P62891 RNU6-836P-201ENST00000362920 107 ntBASIC-6.71□□□□□ -3.48
RPL39P62891 AL445567.1-201ENST00000439121 144 ntBASIC-6.71□□□□□ -3.48
RPL39P62891 RNU7-153P-201ENST00000516455 62 ntBASIC-6.71□□□□□ -3.48
RPL39P62891 RNU6-231P-201ENST00000517122 103 ntBASIC-6.71□□□□□ -3.48
RPL39P62891 MIR3149-201ENST00000584629 83 ntBASIC-6.71□□□□□ -3.48
RPL39P62891 RNU6-788P-201ENST00000390967 104 ntBASIC-6.73□□□□□ -3.49
RPL39P62891 SNORD116.2-201ENST00000391251 93 ntBASIC-6.73□□□□□ -3.49
RPL39P62891 Y_RNA.590-201ENST00000410140 107 ntBASIC-6.73□□□□□ -3.49
RPL39P62891 RNU6-1108P-201ENST00000516308 104 ntBASIC-6.73□□□□□ -3.49
RPL39P62891 MIR376A1-201ENST00000616574 68 ntBASIC-6.73□□□□□ -3.49
RPL39P62891 MIR363-201ENST00000384840 75 ntBASIC-6.74□□□□□ -3.49
RPL39P62891 RNU6-130P-201ENST00000411112 103 ntBASIC-6.74□□□□□ -3.49
RPL39P62891 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-6.74□□□□□ -3.49
RPL39P62891 RNU4-40P-201ENST00000364351 143 ntBASIC-6.75□□□□□ -3.49
RPL39P62891 Y_RNA.581-201ENST00000391017 97 ntBASIC-6.75□□□□□ -3.49
RPL39P62891 SNORD2.1-201ENST00000458762 69 ntBASIC-6.75□□□□□ -3.49
RPL39P62891 SNORD81.2-201ENST00000365153 76 ntBASIC-6.76□□□□□ -3.49
RPL39P62891 RNU6-1046P-201ENST00000516538 107 ntBASIC-6.76□□□□□ -3.49
RPL39P62891 Y_RNA.686-201ENST00000516548 134 ntBASIC-6.76□□□□□ -3.49
RPL39P62891 Z99129.1-201ENST00000612510 255 ntBASIC-6.76□□□□□ -3.49
RPL39P62891 Y_RNA.275-201ENST00000364726 110 ntBASIC-6.77□□□□□ -3.49
RPL39P62891 AC099799.1-201ENST00000439809 192 ntBASIC-6.77□□□□□ -3.49
RPL39P62891 RNU6-332P-201ENST00000391193 108 ntBASIC-6.78□□□□□ -3.49
RPL39P62891 MIR4777-201ENST00000583710 86 ntBASIC-6.78□□□□□ -3.49
RPL39P62891 AL603755.1-201ENST00000619504 163 ntBASIC-6.78□□□□□ -3.49
RPL39P62891 MIR4272-201ENST00000635924 64 ntBASIC-6.78□□□□□ -3.49
RPL39P62891 SNORD115-46-201ENST00000390982 71 ntBASIC-6.79□□□□□ -3.5
RPL39P62891 Y_RNA.682-201ENST00000516457 100 ntBASIC-6.79□□□□□ -3.5
RPL39P62891 RNU6-303P-201ENST00000517091 106 ntBASIC-6.79□□□□□ -3.5
RPL39P62891 Y_RNA.359-201ENST00000365498 102 ntBASIC-6.8□□□□□ -3.5
RPL39P62891 SEPT14P3-201ENST00000439401 183 ntBASIC-6.8□□□□□ -3.5
RPL39P62891 AL732372.2-207ENST00000445840 183 ntBASIC-6.8□□□□□ -3.5
RPL39P62891 SEPT14P2-201ENST00000453405 183 ntBASIC-6.8□□□□□ -3.5
RPL39P62891 FO082796.1-201ENST00000523795 183 ntBASIC-6.8□□□□□ -3.5
RPL39P62891 SNORD113.1-201ENST00000363280 73 ntBASIC-6.81□□□□□ -3.5
RPL39P62891 Y_RNA.169-201ENST00000363745 96 ntBASIC-6.81□□□□□ -3.5
RPL39P62891 Y_RNA.218-201ENST00000364218 104 ntBASIC-6.81□□□□□ -3.5
RPL39P62891 Y_RNA.309-201ENST00000365046 111 ntBASIC-6.81□□□□□ -3.5
RPL39P62891 RNU6-402P-201ENST00000410678 103 ntBASIC-6.81□□□□□ -3.5
RPL39P62891 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-6.81□□□□□ -3.5
RPL39P62891 SNORD116-6-201ENST00000384711 96 ntBASIC-6.82□□□□□ -3.5
RPL39P62891 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-6.82□□□□□ -3.5
RPL39P62891 MIR8053-201ENST00000613344 75 ntBASIC-6.82□□□□□ -3.5
RPL39P62891 RNU6-1134P-201ENST00000365156 101 ntBASIC-6.83□□□□□ -3.5
RPL39P62891 SNORD116-2-201ENST00000384274 95 ntBASIC-6.83□□□□□ -3.5
RPL39P62891 MIR1263-201ENST00000408324 86 ntBASIC-6.83□□□□□ -3.5
RPL39P62891 RNA5SP449-201ENST00000516871 130 ntBASIC-6.83□□□□□ -3.5
RPL39P62891 SNORD115.2-201ENST00000391126 59 ntBASIC-6.84□□□□□ -3.5
RPL39P62891 Y_RNA.609-201ENST00000410669 89 ntBASIC-6.85□□□□□ -3.51
RPL39P62891 Y_RNA.705-201ENST00000516862 110 ntBASIC-6.85□□□□□ -3.51
RPL39P62891 RNU6-972P-201ENST00000391208 107 ntBASIC-6.86□□□□□ -3.51
RPL39P62891 RNU6-537P-201ENST00000517277 103 ntBASIC-6.86□□□□□ -3.51
RPL39P62891 RNU6-92P-201ENST00000605893 104 ntBASIC-6.86□□□□□ -3.51
RPL39P62891 U6.104-201ENST00000637979 90 ntBASIC-6.86□□□□□ -3.51
RPL39P62891 RNU6-639P-201ENST00000384074 107 ntBASIC-6.88□□□□□ -3.51
RPL39P62891 Y_RNA.445-201ENST00000384168 102 ntBASIC-6.88□□□□□ -3.51
RPL39P62891 AC074348.1-201ENST00000426503 132 ntBASIC-6.88□□□□□ -3.51
RPL39P62891 MTND2P14-201ENST00000482139 351 ntBASIC-6.88□□□□□ -3.51
RPL39P62891 RNU2-72P-201ENST00000411175 163 ntBASIC-6.89□□□□□ -3.51
RPL39P62891 SNORA40.16-201ENST00000517238 121 ntBASIC-6.89□□□□□ -3.51
RPL39P62891 MIR6844-201ENST00000637122 62 ntBASIC-6.89□□□□□ -3.51
RPL39P62891 RNU6-1257P-201ENST00000384625 110 ntBASIC-6.9□□□□□ -3.51
RPL39P62891 AC090574.1-201ENST00000623186 233 ntBASIC-6.9□□□□□ -3.51
RPL39P62891 RNU6-373P-201ENST00000411247 98 ntBASIC-6.91□□□□□ -3.52
RPL39P62891 MIR548F5-201ENST00000408421 86 ntBASIC-6.92□□□□□ -3.52
RPL39P62891 RNU6-1314P-201ENST00000517139 104 ntBASIC-6.92□□□□□ -3.52
RPL39P62891 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-6.93□□□□□ -3.52
RPL39P62891 MIR3121-201ENST00000579680 77 ntBASIC-6.93□□□□□ -3.52
RPL39P62891 AC104985.2-201ENST00000620598 500 ntBASIC-6.93□□□□□ -3.52
RPL39P62891 SNORD113-6-201ENST00000363345 75 ntBASIC-6.94□□□□□ -3.52
RPL39P62891 SNORD116-10-201ENST00000363791 102 ntBASIC-6.94□□□□□ -3.52
RPL39P62891 NBR2-204ENST00000587322 63 ntBASIC-6.94□□□□□ -3.52
RPL39P62891 RNU6-887P-201ENST00000410660 100 ntBASIC-6.95□□□□□ -3.52
RPL39P62891 SNORA40.14-201ENST00000516543 86 ntBASIC-6.95□□□□□ -3.52
RPL39P62891 Y_RNA.262-201ENST00000364641 102 ntBASIC-6.96□□□□□ -3.52
RPL39P62891 RNU6-196P-201ENST00000384315 107 ntBASIC-6.96□□□□□ -3.52
RPL39P62891 Y_RNA.485-201ENST00000384395 102 ntBASIC-6.96□□□□□ -3.52
RPL39P62891 RNU6-876P-201ENST00000391295 104 ntBASIC-6.96□□□□□ -3.52
RPL39P62891 SNORD60.1-201ENST00000362451 73 ntBASIC-6.97□□□□□ -3.53
RPL39P62891 RNU6-275P-201ENST00000364910 107 ntBASIC-6.97□□□□□ -3.53
RPL39P62891 RNU6-1043P-201ENST00000410355 99 ntBASIC-6.97□□□□□ -3.53
RPL39P62891 RNU6-1085P-201ENST00000363576 107 ntBASIC-6.98□□□□□ -3.53
RPL39P62891 Y_RNA.202-201ENST00000364083 110 ntBASIC-6.98□□□□□ -3.53
RPL39P62891 MIR548P-201ENST00000408336 84 ntBASIC-6.98□□□□□ -3.53
RPL39P62891 MIR4317-201ENST00000637586 65 ntBASIC-6.98□□□□□ -3.53
RPL39P62891 RNU6-795P-201ENST00000516323 103 ntBASIC-6.99□□□□□ -3.53
RPL39P62891 SNORA63.4-201ENST00000362763 126 ntBASIC-7□□□□□ -3.53
RPL39P62891 RNU6-624P-201ENST00000363411 107 ntBASIC-7□□□□□ -3.53
RPL39P62891 RNY3P10-201ENST00000384764 102 ntBASIC-7□□□□□ -3.53
RPL39P62891 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-7□□□□□ -3.53
RPL39P62891 RNU6-419P-201ENST00000517030 63 ntBASIC-7□□□□□ -3.53
RPL39P62891 AL160413.1-201ENST00000622780 310 ntBASIC-7□□□□□ -3.53
RPL39P62891 Y_RNA.88-201ENST00000363029 99 ntBASIC-7.01□□□□□ -3.53
RPL39P62891 RNU6-162P-201ENST00000516228 103 ntBASIC-7.01□□□□□ -3.53
RPL39P62891 RNU6-267P-201ENST00000516714 103 ntBASIC-7.01□□□□□ -3.53
RPL39P62891 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-7.01□□□□□ -3.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms