Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MIR601-201ENST00000385256 79 ntBASIC-1.4□□□□□ -2.63
VSX2P58304 RNU7-153P-201ENST00000516455 62 ntBASIC-1.4□□□□□ -2.63
VSX2P58304 MIR4796-201ENST00000580742 81 ntBASIC-1.4□□□□□ -2.63
VSX2P58304 U6.81-201ENST00000612550 106 ntBASIC-1.4□□□□□ -2.63
VSX2P58304 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.41□□□□□ -2.64
VSX2P58304 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.41□□□□□ -2.64
VSX2P58304 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.41□□□□□ -2.64
VSX2P58304 MIR521-2-201ENST00000384818 87 ntBASIC-1.42□□□□□ -2.64
VSX2P58304 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.42□□□□□ -2.64
VSX2P58304 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.42□□□□□ -2.64
VSX2P58304 MIR365A-201ENST00000362260 87 ntBASIC-1.43□□□□□ -2.64
VSX2P58304 RNU6-924P-201ENST00000362926 108 ntBASIC-1.43□□□□□ -2.64
VSX2P58304 MIR519A2-201ENST00000384990 87 ntBASIC-1.43□□□□□ -2.64
VSX2P58304 AC091912.2-201ENST00000624798 167 ntBASIC-1.43□□□□□ -2.64
VSX2P58304 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.44□□□□□ -2.64
VSX2P58304 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.44□□□□□ -2.64
VSX2P58304 SNORD115-22-201ENST00000364456 82 ntBASIC-1.44□□□□□ -2.64
VSX2P58304 RNU6-907P-201ENST00000390924 102 ntBASIC-1.44□□□□□ -2.64
VSX2P58304 RNU4-61P-201ENST00000411243 107 ntBASIC-1.44□□□□□ -2.64
VSX2P58304 RNU7-61P-201ENST00000515897 61 ntBASIC-1.44□□□□□ -2.64
VSX2P58304 RNU6-412P-201ENST00000516434 106 ntBASIC-1.44□□□□□ -2.64
VSX2P58304 RNU6-537P-201ENST00000517277 103 ntBASIC-1.44□□□□□ -2.64
VSX2P58304 MIR4441-201ENST00000582623 100 ntBASIC-1.44□□□□□ -2.64
VSX2P58304 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.44□□□□□ -2.64
VSX2P58304 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.45□□□□□ -2.64
VSX2P58304 RNU6-164P-201ENST00000364604 103 ntBASIC-1.45□□□□□ -2.64
VSX2P58304 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.45□□□□□ -2.64
VSX2P58304 SNORD116-21-201ENST00000384507 92 ntBASIC-1.45□□□□□ -2.64
VSX2P58304 MIR590-201ENST00000385008 97 ntBASIC-1.45□□□□□ -2.64
VSX2P58304 RNY1P5-201ENST00000383890 115 ntBASIC-1.46□□□□□ -2.64
VSX2P58304 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.46□□□□□ -2.64
VSX2P58304 RNU6-162P-201ENST00000516228 103 ntBASIC-1.46□□□□□ -2.64
VSX2P58304 MIR4719-201ENST00000585233 84 ntBASIC-1.46□□□□□ -2.64
VSX2P58304 MIR6739-201ENST00000622461 75 ntBASIC-1.46□□□□□ -2.64
VSX2P58304 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.46□□□□□ -2.64
VSX2P58304 SNORD116-10-201ENST00000363791 102 ntBASIC-1.47□□□□□ -2.64
VSX2P58304 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.47□□□□□ -2.64
VSX2P58304 MIR1236-201ENST00000408340 102 ntBASIC-1.47□□□□□ -2.64
VSX2P58304 RNU6-880P-201ENST00000384526 107 ntBASIC-1.48□□□□□ -2.65
VSX2P58304 RNU6-983P-201ENST00000516004 103 ntBASIC-1.48□□□□□ -2.65
VSX2P58304 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.48□□□□□ -2.65
VSX2P58304 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.49□□□□□ -2.65
VSX2P58304 RNA5SP86-201ENST00000390869 98 ntBASIC-1.49□□□□□ -2.65
VSX2P58304 RNU6-109P-201ENST00000516364 107 ntBASIC-1.49□□□□□ -2.65
VSX2P58304 RNU6-184P-201ENST00000516514 107 ntBASIC-1.49□□□□□ -2.65
VSX2P58304 MIR548AG1-201ENST00000579932 66 ntBASIC-1.49□□□□□ -2.65
VSX2P58304 MIR4723-201ENST00000585070 81 ntBASIC-1.49□□□□□ -2.65
VSX2P58304 MIR6874-201ENST00000635894 71 ntBASIC-1.49□□□□□ -2.65
VSX2P58304 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.5□□□□□ -2.65
VSX2P58304 RNU6-518P-201ENST00000516056 96 ntBASIC-1.5□□□□□ -2.65
VSX2P58304 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.51□□□□□ -2.65
VSX2P58304 AL353691.2-201ENST00000443795 59 ntBASIC-1.51□□□□□ -2.65
VSX2P58304 AL450471.1-201ENST00000447509 127 ntBASIC-1.51□□□□□ -2.65
VSX2P58304 RNU7-154P-201ENST00000516194 62 ntBASIC-1.51□□□□□ -2.65
VSX2P58304 SNORD18.1-201ENST00000363807 70 ntBASIC-1.52□□□□□ -2.65
VSX2P58304 RNU6-340P-201ENST00000364005 107 ntBASIC-1.52□□□□□ -2.65
VSX2P58304 SNORD115-27-201ENST00000364430 82 ntBASIC-1.52□□□□□ -2.65
VSX2P58304 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.52□□□□□ -2.65
VSX2P58304 U7.3-201ENST00000616123 62 ntBASIC-1.52□□□□□ -2.65
VSX2P58304 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.53□□□□□ -2.65
VSX2P58304 SNORD116-14-201ENST00000383894 92 ntBASIC-1.53□□□□□ -2.65
VSX2P58304 SNORD116-17-201ENST00000383929 92 ntBASIC-1.53□□□□□ -2.65
VSX2P58304 SNORD116-15-201ENST00000384445 92 ntBASIC-1.53□□□□□ -2.65
VSX2P58304 SNORD116-19-201ENST00000384729 92 ntBASIC-1.53□□□□□ -2.65
VSX2P58304 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.53□□□□□ -2.65
VSX2P58304 AC090425.1-201ENST00000610007 140 ntBASIC-1.53□□□□□ -2.65
VSX2P58304 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.54□□□□□ -2.66
VSX2P58304 MIR487B-201ENST00000385021 84 ntBASIC-1.54□□□□□ -2.66
VSX2P58304 AP002795.1-201ENST00000534879 84 ntBASIC-1.54□□□□□ -2.66
VSX2P58304 U4.2-201ENST00000618561 85 ntBASIC-1.54□□□□□ -2.66
VSX2P58304 RNU6-774P-201ENST00000363238 107 ntBASIC-1.55□□□□□ -2.66
VSX2P58304 RNU6-704P-201ENST00000364162 103 ntBASIC-1.55□□□□□ -2.66
VSX2P58304 MIR1302-5-201ENST00000408164 150 ntBASIC-1.55□□□□□ -2.66
VSX2P58304 RNU6-656P-201ENST00000516785 107 ntBASIC-1.55□□□□□ -2.66
VSX2P58304 RNU6-228P-201ENST00000362700 106 ntBASIC-1.56□□□□□ -2.66
VSX2P58304 MIR548H1-201ENST00000408610 102 ntBASIC-1.56□□□□□ -2.66
VSX2P58304 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.56□□□□□ -2.66
VSX2P58304 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.57□□□□□ -2.66
VSX2P58304 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.57□□□□□ -2.66
VSX2P58304 SNORD19-201ENST00000391191 68 ntBASIC-1.57□□□□□ -2.66
VSX2P58304 AL078595.1-201ENST00000404458 226 ntBASIC-1.57□□□□□ -2.66
VSX2P58304 RNU6-752P-201ENST00000516376 102 ntBASIC-1.57□□□□□ -2.66
VSX2P58304 RNU6-106P-201ENST00000384405 107 ntBASIC-1.58□□□□□ -2.66
VSX2P58304 SNORA19-201ENST00000384737 128 ntBASIC-1.58□□□□□ -2.66
VSX2P58304 MIR507-201ENST00000385234 94 ntBASIC-1.58□□□□□ -2.66
VSX2P58304 RNU6-554P-201ENST00000410466 106 ntBASIC-1.58□□□□□ -2.66
VSX2P58304 AL035461.1-201ENST00000421490 332 ntBASIC-1.58□□□□□ -2.66
VSX2P58304 AL021921.1-201ENST00000442774 93 ntBASIC-1.58□□□□□ -2.66
VSX2P58304 RNU7-88P-201ENST00000458752 63 ntBASIC-1.58□□□□□ -2.66
VSX2P58304 RNU6-168P-201ENST00000516189 101 ntBASIC-1.58□□□□□ -2.66
VSX2P58304 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.59□□□□□ -2.66
VSX2P58304 AC090616.4-201ENST00000448026 115 ntBASIC-1.59□□□□□ -2.66
VSX2P58304 RNU6-732P-201ENST00000516033 103 ntBASIC-1.59□□□□□ -2.66
VSX2P58304 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.6□□□□□ -2.67
VSX2P58304 RNU6-246P-201ENST00000384702 107 ntBASIC-1.6□□□□□ -2.67
VSX2P58304 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.6□□□□□ -2.67
VSX2P58304 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.6□□□□□ -2.67
VSX2P58304 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.6□□□□□ -2.67
VSX2P58304 U7.5-201ENST00000517224 61 ntBASIC-1.6□□□□□ -2.67
VSX2P58304 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms