Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6-147P-201ENST00000383983 107 ntBASIC-0.84□□□□□ -2.54
NEK3P51956 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.84□□□□□ -2.54
NEK3P51956 RNU6-30P-201ENST00000384561 107 ntBASIC-0.84□□□□□ -2.54
NEK3P51956 MIRLET7B-201ENST00000385140 83 ntBASIC-0.84□□□□□ -2.54
NEK3P51956 SNORD77.2-201ENST00000391045 68 ntBASIC-0.84□□□□□ -2.54
NEK3P51956 SNORD22.1-201ENST00000516331 125 ntBASIC-0.84□□□□□ -2.54
NEK3P51956 MIR3179-1-201ENST00000578940 84 ntBASIC-0.84□□□□□ -2.54
NEK3P51956 MIR3179-2-201ENST00000579107 84 ntBASIC-0.84□□□□□ -2.54
NEK3P51956 MIR3179-3-201ENST00000579566 84 ntBASIC-0.84□□□□□ -2.54
NEK3P51956 MIR3179-4-201ENST00000617599 84 ntBASIC-0.84□□□□□ -2.54
NEK3P51956 RNY1P7-201ENST00000384743 110 ntBASIC-0.85□□□□□ -2.55
NEK3P51956 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.85□□□□□ -2.55
NEK3P51956 U6.96-201ENST00000636425 70 ntBASIC-0.85□□□□□ -2.55
NEK3P51956 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.86□□□□□ -2.55
NEK3P51956 SNORA63.4-201ENST00000362763 126 ntBASIC-0.86□□□□□ -2.55
NEK3P51956 MIR517B-201ENST00000385102 67 ntBASIC-0.86□□□□□ -2.55
NEK3P51956 MIR518B-201ENST00000385127 83 ntBASIC-0.86□□□□□ -2.55
NEK3P51956 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.87□□□□□ -2.55
NEK3P51956 SNORD83B-201ENST00000386745 93 ntBASIC-0.87□□□□□ -2.55
NEK3P51956 AC093729.1-201ENST00000513074 128 ntBASIC-0.87□□□□□ -2.55
NEK3P51956 MIR3657-201ENST00000584818 117 ntBASIC-0.87□□□□□ -2.55
NEK3P51956 RNU6-431P-201ENST00000383874 107 ntBASIC-0.88□□□□□ -2.55
NEK3P51956 MT-TQ-201ENST00000387372 72 ntBASIC-0.88□□□□□ -2.55
NEK3P51956 RNU6-337P-201ENST00000391243 106 ntBASIC-0.88□□□□□ -2.55
NEK3P51956 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.88□□□□□ -2.55
NEK3P51956 RNU6-905P-201ENST00000384434 107 ntBASIC-0.89□□□□□ -2.55
NEK3P51956 AP000533.3-201ENST00000447704 118 ntBASIC-0.89□□□□□ -2.55
NEK3P51956 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.89□□□□□ -2.55
NEK3P51956 RNU6-340P-201ENST00000364005 107 ntBASIC-0.9□□□□□ -2.55
NEK3P51956 SNORD115-23-201ENST00000364461 82 ntBASIC-0.9□□□□□ -2.55
NEK3P51956 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.9□□□□□ -2.55
NEK3P51956 AC022137.1-201ENST00000483735 151 ntBASIC-0.9□□□□□ -2.55
NEK3P51956 YWHAEP3-201ENST00000582767 121 ntBASIC-0.9□□□□□ -2.55
NEK3P51956 SNORD64-201ENST00000386683 67 ntBASIC-0.91□□□□□ -2.56
NEK3P51956 MIR4499-201ENST00000584834 69 ntBASIC-0.91□□□□□ -2.56
NEK3P51956 RNU6-624P-201ENST00000363411 107 ntBASIC-0.92□□□□□ -2.56
NEK3P51956 RNU6-640P-201ENST00000363693 105 ntBASIC-0.92□□□□□ -2.56
NEK3P51956 RNU6-219P-201ENST00000364728 107 ntBASIC-0.92□□□□□ -2.56
NEK3P51956 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.92□□□□□ -2.56
NEK3P51956 SCARNA17-201ENST00000516183 144 ntBASIC-0.92□□□□□ -2.56
NEK3P51956 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.92□□□□□ -2.56
NEK3P51956 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
NEK3P51956 MIR6854-201ENST00000614935 69 ntBASIC-0.92□□□□□ -2.56
NEK3P51956 SNORD74.6-201ENST00000364796 70 ntBASIC-0.93□□□□□ -2.56
NEK3P51956 MIR548AX-201ENST00000580117 73 ntBASIC-0.93□□□□□ -2.56
NEK3P51956 RNU6-497P-201ENST00000365316 104 ntBASIC-0.94□□□□□ -2.56
NEK3P51956 SNORA62.4-201ENST00000365504 151 ntBASIC-0.94□□□□□ -2.56
NEK3P51956 MIR203A-201ENST00000384836 110 ntBASIC-0.94□□□□□ -2.56
NEK3P51956 RNA5SP67-201ENST00000516422 131 ntBASIC-0.94□□□□□ -2.56
NEK3P51956 uc_338.19-201ENST00000616808 99 ntBASIC-0.94□□□□□ -2.56
NEK3P51956 MIR147A-201ENST00000385079 72 ntBASIC-0.95□□□□□ -2.56
NEK3P51956 SCARNA18B-201ENST00000458806 135 ntBASIC-0.95□□□□□ -2.56
NEK3P51956 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.95□□□□□ -2.56
NEK3P51956 RNA5SP470-201ENST00000516463 106 ntBASIC-0.95□□□□□ -2.56
NEK3P51956 MIR382-201ENST00000637119 76 ntBASIC-0.95□□□□□ -2.56
NEK3P51956 RNU6-44P-201ENST00000384045 107 ntBASIC-0.96□□□□□ -2.56
NEK3P51956 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.96□□□□□ -2.56
NEK3P51956 RNU6-402P-201ENST00000410678 103 ntBASIC-0.96□□□□□ -2.56
NEK3P51956 RNU6-557P-201ENST00000516842 110 ntBASIC-0.96□□□□□ -2.56
NEK3P51956 AC140658.3-201ENST00000567603 271 ntBASIC-0.96□□□□□ -2.56
NEK3P51956 MIR521-2-201ENST00000384818 87 ntBASIC-0.97□□□□□ -2.56
NEK3P51956 RNA5SP147-201ENST00000516493 109 ntBASIC-0.97□□□□□ -2.56
NEK3P51956 MIR488-201ENST00000365739 83 ntBASIC-0.98□□□□□ -2.57
NEK3P51956 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.98□□□□□ -2.57
NEK3P51956 RNU6-675P-201ENST00000384236 104 ntBASIC-0.99□□□□□ -2.57
NEK3P51956 MIR6739-201ENST00000622461 75 ntBASIC-0.99□□□□□ -2.57
NEK3P51956 MIR548BB-201ENST00000626714 66 ntBASIC-0.99□□□□□ -2.57
NEK3P51956 RNU6-1108P-201ENST00000516308 104 ntBASIC-1□□□□□ -2.57
NEK3P51956 RNU6-844P-201ENST00000517175 102 ntBASIC-1□□□□□ -2.57
NEK3P51956 MIR378F-201ENST00000578143 78 ntBASIC-1□□□□□ -2.57
NEK3P51956 SNORA33.1-201ENST00000364957 130 ntBASIC-1.01□□□□□ -2.57
NEK3P51956 RNU6-168P-201ENST00000516189 101 ntBASIC-1.02□□□□□ -2.57
NEK3P51956 SNORD114-17-201ENST00000364699 75 ntBASIC-1.03□□□□□ -2.57
NEK3P51956 MIR124-2-201ENST00000385081 109 ntBASIC-1.03□□□□□ -2.57
NEK3P51956 SNORD18.2-201ENST00000459604 70 ntBASIC-1.03□□□□□ -2.57
NEK3P51956 MIR4324-201ENST00000584846 72 ntBASIC-1.04□□□□□ -2.58
NEK3P51956 RNU6-267P-201ENST00000516714 103 ntBASIC-1.05□□□□□ -2.58
NEK3P51956 RNU6-303P-201ENST00000517091 106 ntBASIC-1.06□□□□□ -2.58
NEK3P51956 CYP3A54P-201ENST00000566950 75 ntBASIC-1.06□□□□□ -2.58
NEK3P51956 MIR4464-201ENST00000580818 92 ntBASIC-1.06□□□□□ -2.58
NEK3P51956 AC090617.8-201ENST00000623339 167 ntBASIC-1.06□□□□□ -2.58
NEK3P51956 MIR409-201ENST00000362237 79 ntBASIC-1.07□□□□□ -2.58
NEK3P51956 RNU6-686P-201ENST00000364839 107 ntBASIC-1.07□□□□□ -2.58
NEK3P51956 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.07□□□□□ -2.58
NEK3P51956 RNU7-134P-201ENST00000458997 64 ntBASIC-1.07□□□□□ -2.58
NEK3P51956 RNY1P9-201ENST00000532431 109 ntBASIC-1.07□□□□□ -2.58
NEK3P51956 AL627230.5-201ENST00000619807 58 ntBASIC-1.07□□□□□ -2.58
NEK3P51956 RNU6-380P-201ENST00000410207 107 ntBASIC-1.08□□□□□ -2.58
NEK3P51956 AL353803.5-201ENST00000599815 141 ntBASIC-1.08□□□□□ -2.58
NEK3P51956 AC006160.2-201ENST00000637708 154 ntBASIC-1.08□□□□□ -2.58
NEK3P51956 MIR1255B2-201ENST00000408618 67 ntBASIC-1.09□□□□□ -2.58
NEK3P51956 RNA5SP89-201ENST00000410300 108 ntBASIC-1.09□□□□□ -2.58
NEK3P51956 MIR6738-201ENST00000619620 64 ntBASIC-1.09□□□□□ -2.58
NEK3P51956 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.1□□□□□ -2.59
NEK3P51956 RNU6-129P-201ENST00000391022 107 ntBASIC-1.1□□□□□ -2.59
NEK3P51956 snoU83B.1-201ENST00000517136 88 ntBASIC-1.1□□□□□ -2.59
NEK3P51956 MIR4306-201ENST00000583390 91 ntBASIC-1.1□□□□□ -2.59
NEK3P51956 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.11□□□□□ -2.59
NEK3P51956 RNU6-24P-201ENST00000384440 107 ntBASIC-1.11□□□□□ -2.59
NEK3P51956 RNU7-154P-201ENST00000516194 62 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms