Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNU6-172P-201ENST00000411000 93 ntBASIC-4.6□□□□□ -3.15
HMGA1P17096 Y_RNA.649-201ENST00000459077 103 ntBASIC-4.6□□□□□ -3.15
HMGA1P17096 SNORA40.14-201ENST00000516543 86 ntBASIC-4.6□□□□□ -3.15
HMGA1P17096 RNU6-681P-201ENST00000364012 104 ntBASIC-4.61□□□□□ -3.15
HMGA1P17096 SNORD2.1-201ENST00000458762 69 ntBASIC-4.61□□□□□ -3.15
HMGA1P17096 RNU6-300P-201ENST00000459080 104 ntBASIC-4.61□□□□□ -3.15
HMGA1P17096 SNORD116.3-201ENST00000517176 78 ntBASIC-4.61□□□□□ -3.15
HMGA1P17096 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-4.61□□□□□ -3.15
HMGA1P17096 Y_RNA.183-201ENST00000363882 113 ntBASIC-4.62□□□□□ -3.15
HMGA1P17096 SNORD58B-201ENST00000607313 66 ntBASIC-4.62□□□□□ -3.15
HMGA1P17096 SNORA41B-201ENST00000384785 128 ntBASIC-4.63□□□□□ -3.15
HMGA1P17096 MIR1263-201ENST00000408324 86 ntBASIC-4.63□□□□□ -3.15
HMGA1P17096 RNU6-554P-201ENST00000410466 106 ntBASIC-4.63□□□□□ -3.15
HMGA1P17096 Y_RNA.402-201ENST00000383972 102 ntBASIC-4.64□□□□□ -3.15
HMGA1P17096 RNU6-813P-201ENST00000384691 107 ntBASIC-4.64□□□□□ -3.15
HMGA1P17096 SNORA75.5-201ENST00000391291 81 ntBASIC-4.64□□□□□ -3.15
HMGA1P17096 RNU6-121P-201ENST00000410525 99 ntBASIC-4.64□□□□□ -3.15
HMGA1P17096 Y_RNA.563-201ENST00000384707 108 ntBASIC-4.66□□□□□ -3.16
HMGA1P17096 RNU6-982P-201ENST00000516216 102 ntBASIC-4.66□□□□□ -3.16
HMGA1P17096 RNU6-176P-201ENST00000517196 105 ntBASIC-4.66□□□□□ -3.16
HMGA1P17096 MIR5690-201ENST00000583739 73 ntBASIC-4.66□□□□□ -3.16
HMGA1P17096 MIR4439-201ENST00000583746 80 ntBASIC-4.66□□□□□ -3.16
HMGA1P17096 Y_RNA.69-201ENST00000362885 109 ntBASIC-4.67□□□□□ -3.16
HMGA1P17096 MIR656-201ENST00000385224 78 ntBASIC-4.67□□□□□ -3.16
HMGA1P17096 Y_RNA.590-201ENST00000410140 107 ntBASIC-4.67□□□□□ -3.16
HMGA1P17096 AL160413.1-201ENST00000622780 310 ntBASIC-4.67□□□□□ -3.16
HMGA1P17096 SNORA63-201ENST00000363450 132 ntBASIC-4.68□□□□□ -3.16
HMGA1P17096 RNU5A-2P-201ENST00000384337 116 ntBASIC-4.68□□□□□ -3.16
HMGA1P17096 Y_RNA.496-201ENST00000384444 101 ntBASIC-4.68□□□□□ -3.16
HMGA1P17096 MIR4694-201ENST00000578534 80 ntBASIC-4.69□□□□□ -3.16
HMGA1P17096 MIR3613-201ENST00000579844 87 ntBASIC-4.69□□□□□ -3.16
HMGA1P17096 Y_RNA.262-201ENST00000364641 102 ntBASIC-4.7□□□□□ -3.16
HMGA1P17096 Y_RNA.359-201ENST00000365498 102 ntBASIC-4.7□□□□□ -3.16
HMGA1P17096 MIR6844-201ENST00000637122 62 ntBASIC-4.7□□□□□ -3.16
HMGA1P17096 RNU6-755P-201ENST00000364400 103 ntBASIC-4.71□□□□□ -3.16
HMGA1P17096 Y_RNA.44-201ENST00000362676 108 ntBASIC-4.72□□□□□ -3.17
HMGA1P17096 RNU6-1318P-201ENST00000365389 103 ntBASIC-4.72□□□□□ -3.17
HMGA1P17096 Y_RNA.435-201ENST00000384095 112 ntBASIC-4.72□□□□□ -3.17
HMGA1P17096 RNU4-11P-201ENST00000365287 132 ntBASIC-4.73□□□□□ -3.17
HMGA1P17096 RNU6-604P-201ENST00000390917 100 ntBASIC-4.73□□□□□ -3.17
HMGA1P17096 RNU6-956P-201ENST00000458868 103 ntBASIC-4.73□□□□□ -3.17
HMGA1P17096 RNU7-160P-201ENST00000516660 62 ntBASIC-4.73□□□□□ -3.17
HMGA1P17096 MIR3149-201ENST00000584629 83 ntBASIC-4.73□□□□□ -3.17
HMGA1P17096 RNU6-822P-201ENST00000362707 106 ntBASIC-4.74□□□□□ -3.17
HMGA1P17096 SNORD58A-201ENST00000383875 65 ntBASIC-4.74□□□□□ -3.17
HMGA1P17096 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.74□□□□□ -3.17
HMGA1P17096 RNU6-510P-201ENST00000391239 108 ntBASIC-4.74□□□□□ -3.17
HMGA1P17096 Y_RNA.635-201ENST00000459041 101 ntBASIC-4.74□□□□□ -3.17
HMGA1P17096 RNY3P16-201ENST00000516338 101 ntBASIC-4.74□□□□□ -3.17
HMGA1P17096 Y_RNA.95-201ENST00000363079 95 ntBASIC-4.75□□□□□ -3.17
HMGA1P17096 Y_RNA.166-201ENST00000363730 102 ntBASIC-4.75□□□□□ -3.17
HMGA1P17096 SNORD45B-201ENST00000364617 72 ntBASIC-4.75□□□□□ -3.17
HMGA1P17096 RNY4P18-201ENST00000391107 89 ntBASIC-4.75□□□□□ -3.17
HMGA1P17096 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.75□□□□□ -3.17
HMGA1P17096 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-4.75□□□□□ -3.17
HMGA1P17096 MIR363-201ENST00000384840 75 ntBASIC-4.76□□□□□ -3.17
HMGA1P17096 RNU6-493P-201ENST00000391321 108 ntBASIC-4.76□□□□□ -3.17
HMGA1P17096 RNA5SP449-201ENST00000516871 130 ntBASIC-4.76□□□□□ -3.17
HMGA1P17096 SNORD77.2-201ENST00000391045 68 ntBASIC-4.77□□□□□ -3.17
HMGA1P17096 RNY3P2-201ENST00000362918 102 ntBASIC-4.78□□□□□ -3.17
HMGA1P17096 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.78□□□□□ -3.17
HMGA1P17096 AC009094.1-201ENST00000564443 426 ntBASIC-4.78□□□□□ -3.17
HMGA1P17096 RNU6-275P-201ENST00000364910 107 ntBASIC-4.79□□□□□ -3.18
HMGA1P17096 RNA5SP136-201ENST00000410906 107 ntBASIC-4.79□□□□□ -3.18
HMGA1P17096 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.8□□□□□ -3.18
HMGA1P17096 AC139453.2-201ENST00000487255 133 ntBASIC-4.8□□□□□ -3.18
HMGA1P17096 MTND1P19-201ENST00000511780 315 ntBASIC-4.8□□□□□ -3.18
HMGA1P17096 MIR548P-201ENST00000408336 84 ntBASIC-4.81□□□□□ -3.18
HMGA1P17096 RNU7-153P-201ENST00000516455 62 ntBASIC-4.81□□□□□ -3.18
HMGA1P17096 AC109635.3-201ENST00000529536 185 ntBASIC-4.81□□□□□ -3.18
HMGA1P17096 RNA5SP224-201ENST00000365069 126 ntBASIC-4.82□□□□□ -3.18
HMGA1P17096 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.82□□□□□ -3.18
HMGA1P17096 RNU6-1338P-201ENST00000516328 91 ntBASIC-4.82□□□□□ -3.18
HMGA1P17096 SNORD45C-201ENST00000383893 79 ntBASIC-4.84□□□□□ -3.18
HMGA1P17096 RNU6-259P-201ENST00000383999 107 ntBASIC-4.84□□□□□ -3.18
HMGA1P17096 RNU6-788P-201ENST00000390967 104 ntBASIC-4.84□□□□□ -3.18
HMGA1P17096 MTND5P22-201ENST00000458380 195 ntBASIC-4.84□□□□□ -3.18
HMGA1P17096 RNU6-1108P-201ENST00000516308 104 ntBASIC-4.84□□□□□ -3.18
HMGA1P17096 AC078883.4-201ENST00000623218 367 ntBASIC-4.84□□□□□ -3.18
HMGA1P17096 RNU4-85P-201ENST00000364675 123 ntBASIC-4.85□□□□□ -3.19
HMGA1P17096 RNA5SP173-201ENST00000364857 136 ntBASIC-4.85□□□□□ -3.19
HMGA1P17096 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.85□□□□□ -3.19
HMGA1P17096 MIR1236-201ENST00000408340 102 ntBASIC-4.85□□□□□ -3.19
HMGA1P17096 RNU6-1153P-201ENST00000516760 105 ntBASIC-4.85□□□□□ -3.19
HMGA1P17096 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.86□□□□□ -3.19
HMGA1P17096 RNU6-129P-201ENST00000391022 107 ntBASIC-4.86□□□□□ -3.19
HMGA1P17096 SNORD37.2-201ENST00000391075 66 ntBASIC-4.86□□□□□ -3.19
HMGA1P17096 AC062037.1-201ENST00000605302 128 ntBASIC-4.86□□□□□ -3.19
HMGA1P17096 RNU6-330P-201ENST00000363015 107 ntBASIC-4.87□□□□□ -3.19
HMGA1P17096 RNU6-795P-201ENST00000516323 103 ntBASIC-4.87□□□□□ -3.19
HMGA1P17096 SNORA40.15-201ENST00000516884 107 ntBASIC-4.87□□□□□ -3.19
HMGA1P17096 SNORD127-201ENST00000458892 86 ntBASIC-4.88□□□□□ -3.19
HMGA1P17096 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-4.88□□□□□ -3.19
HMGA1P17096 AC090971.5-201ENST00000621102 293 ntBASIC-4.88□□□□□ -3.19
HMGA1P17096 RNU6-806P-201ENST00000365147 105 ntBASIC-4.89□□□□□ -3.19
HMGA1P17096 RNU6-1134P-201ENST00000365156 101 ntBASIC-4.89□□□□□ -3.19
HMGA1P17096 Y_RNA.337-201ENST00000365312 102 ntBASIC-4.89□□□□□ -3.19
HMGA1P17096 Y_RNA.609-201ENST00000410669 89 ntBASIC-4.89□□□□□ -3.19
HMGA1P17096 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.89□□□□□ -3.19
HMGA1P17096 MIR4282-201ENST00000583613 67 ntBASIC-4.89□□□□□ -3.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms