Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 Y_RNA.784-201ENST00000613803 101 ntBASIC-3.73□□□□□ -3.01
CHKB-CPT1BH3BT56 AC012531.4-201ENST00000616509 177 ntBASIC-3.73□□□□□ -3.01
CHKB-CPT1BH3BT56 Y_RNA.787-201ENST00000616522 101 ntBASIC-3.73□□□□□ -3.01
CHKB-CPT1BH3BT56 Y_RNA.780-201ENST00000617336 101 ntBASIC-3.73□□□□□ -3.01
CHKB-CPT1BH3BT56 Y_RNA.801-201ENST00000619005 101 ntBASIC-3.73□□□□□ -3.01
CHKB-CPT1BH3BT56 SNORD113-3-201ENST00000364830 72 ntBASIC-3.74□□□□□ -3.01
CHKB-CPT1BH3BT56 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.74□□□□□ -3.01
CHKB-CPT1BH3BT56 MIR3974-201ENST00000637126 96 ntBASIC-3.74□□□□□ -3.01
CHKB-CPT1BH3BT56 Y_RNA.11-201ENST00000362375 109 ntBASIC-3.75□□□□□ -3.01
CHKB-CPT1BH3BT56 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-3.75□□□□□ -3.01
CHKB-CPT1BH3BT56 MIR5693-201ENST00000577722 73 ntBASIC-3.75□□□□□ -3.01
CHKB-CPT1BH3BT56 MIR548V-201ENST00000584165 80 ntBASIC-3.75□□□□□ -3.01
CHKB-CPT1BH3BT56 Y_RNA.197-201ENST00000364004 102 ntBASIC-3.76□□□□□ -3.01
CHKB-CPT1BH3BT56 SNORD19B-201ENST00000459623 84 ntBASIC-3.76□□□□□ -3.01
CHKB-CPT1BH3BT56 MIR4777-201ENST00000583710 86 ntBASIC-3.76□□□□□ -3.01
CHKB-CPT1BH3BT56 SNORD1B-201ENST00000363091 84 ntBASIC-3.77□□□□□ -3.01
CHKB-CPT1BH3BT56 MIR581-201ENST00000384895 96 ntBASIC-3.77□□□□□ -3.01
CHKB-CPT1BH3BT56 RNU7-121P-201ENST00000516604 62 ntBASIC-3.77□□□□□ -3.01
CHKB-CPT1BH3BT56 Y_RNA.455-201ENST00000384230 98 ntBASIC-3.78□□□□□ -3.01
CHKB-CPT1BH3BT56 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.78□□□□□ -3.01
CHKB-CPT1BH3BT56 MIR1236-201ENST00000408340 102 ntBASIC-3.78□□□□□ -3.01
CHKB-CPT1BH3BT56 MIR1302-6-201ENST00000408466 90 ntBASIC-3.78□□□□□ -3.01
CHKB-CPT1BH3BT56 RNU6-523P-201ENST00000516304 54 ntBASIC-3.78□□□□□ -3.01
CHKB-CPT1BH3BT56 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.78□□□□□ -3.01
CHKB-CPT1BH3BT56 AC090971.5-201ENST00000621102 293 ntBASIC-3.78□□□□□ -3.01
CHKB-CPT1BH3BT56 RNU6-239P-201ENST00000390990 99 ntBASIC-3.79□□□□□ -3.02
CHKB-CPT1BH3BT56 Y_RNA.632-201ENST00000459189 102 ntBASIC-3.79□□□□□ -3.02
CHKB-CPT1BH3BT56 RNU6-803P-201ENST00000516034 102 ntBASIC-3.79□□□□□ -3.02
CHKB-CPT1BH3BT56 RNU6-781P-201ENST00000516377 101 ntBASIC-3.79□□□□□ -3.02
CHKB-CPT1BH3BT56 Y_RNA.160-201ENST00000363677 92 ntBASIC-3.8□□□□□ -3.02
CHKB-CPT1BH3BT56 Y_RNA.435-201ENST00000384095 112 ntBASIC-3.8□□□□□ -3.02
CHKB-CPT1BH3BT56 RNU7-151P-201ENST00000516930 53 ntBASIC-3.8□□□□□ -3.02
CHKB-CPT1BH3BT56 RNU6-915P-201ENST00000364943 103 ntBASIC-3.81□□□□□ -3.02
CHKB-CPT1BH3BT56 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.81□□□□□ -3.02
CHKB-CPT1BH3BT56 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-3.81□□□□□ -3.02
CHKB-CPT1BH3BT56 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.82□□□□□ -3.02
CHKB-CPT1BH3BT56 SNORD58A-201ENST00000383875 65 ntBASIC-3.82□□□□□ -3.02
CHKB-CPT1BH3BT56 SNORD77.2-201ENST00000391045 68 ntBASIC-3.82□□□□□ -3.02
CHKB-CPT1BH3BT56 SNORD113-2-201ENST00000391082 72 ntBASIC-3.82□□□□□ -3.02
CHKB-CPT1BH3BT56 MIR1302-1-201ENST00000637932 143 ntBASIC-3.82□□□□□ -3.02
CHKB-CPT1BH3BT56 RNU6-639P-201ENST00000384074 107 ntBASIC-3.83□□□□□ -3.02
CHKB-CPT1BH3BT56 SNORD60-201ENST00000383903 83 ntBASIC-3.84□□□□□ -3.02
CHKB-CPT1BH3BT56 MIR125B1-201ENST00000385236 88 ntBASIC-3.84□□□□□ -3.02
CHKB-CPT1BH3BT56 MIR548N-201ENST00000408742 75 ntBASIC-3.84□□□□□ -3.02
CHKB-CPT1BH3BT56 Y_RNA.717-201ENST00000517106 92 ntBASIC-3.84□□□□□ -3.02
CHKB-CPT1BH3BT56 RNU7-197P-201ENST00000458836 62 ntBASIC-3.85□□□□□ -3.03
CHKB-CPT1BH3BT56 RNU6-718P-201ENST00000516166 105 ntBASIC-3.85□□□□□ -3.03
CHKB-CPT1BH3BT56 MIR4679-2-201ENST00000578358 77 ntBASIC-3.85□□□□□ -3.03
CHKB-CPT1BH3BT56 MIR7978-201ENST00000636158 59 ntBASIC-3.85□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.277-201ENST00000364754 102 ntBASIC-3.86□□□□□ -3.03
CHKB-CPT1BH3BT56 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.86□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.86□□□□□ -3.03
CHKB-CPT1BH3BT56 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.86□□□□□ -3.03
CHKB-CPT1BH3BT56 AL035470.1-201ENST00000622571 220 ntBASIC-3.86□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.87□□□□□ -3.03
CHKB-CPT1BH3BT56 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.87□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.87□□□□□ -3.03
CHKB-CPT1BH3BT56 RNU6-460P-201ENST00000391158 108 ntBASIC-3.87□□□□□ -3.03
CHKB-CPT1BH3BT56 RNU6-972P-201ENST00000391208 107 ntBASIC-3.87□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.626-201ENST00000411288 95 ntBASIC-3.87□□□□□ -3.03
CHKB-CPT1BH3BT56 AL158147.1-201ENST00000443970 75 ntBASIC-3.87□□□□□ -3.03
CHKB-CPT1BH3BT56 AC113195.1-201ENST00000579952 141 ntBASIC-3.87□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.395-201ENST00000383945 109 ntBASIC-3.88□□□□□ -3.03
CHKB-CPT1BH3BT56 MIR630-201ENST00000384957 97 ntBASIC-3.88□□□□□ -3.03
CHKB-CPT1BH3BT56 RNU6-918P-201ENST00000391219 106 ntBASIC-3.88□□□□□ -3.03
CHKB-CPT1BH3BT56 RNY4P25-201ENST00000459254 96 ntBASIC-3.88□□□□□ -3.03
CHKB-CPT1BH3BT56 RNU6-982P-201ENST00000516216 102 ntBASIC-3.88□□□□□ -3.03
CHKB-CPT1BH3BT56 RNU6-795P-201ENST00000516323 103 ntBASIC-3.88□□□□□ -3.03
CHKB-CPT1BH3BT56 RNU7-153P-201ENST00000516455 62 ntBASIC-3.88□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.705-201ENST00000516862 110 ntBASIC-3.88□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.89□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.89□□□□□ -3.03
CHKB-CPT1BH3BT56 RNU6-834P-201ENST00000362367 110 ntBASIC-3.9□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.70-201ENST00000362886 110 ntBASIC-3.9□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.9□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.516-201ENST00000384541 124 ntBASIC-3.9□□□□□ -3.03
CHKB-CPT1BH3BT56 SNORD116-4-201ENST00000384733 96 ntBASIC-3.9□□□□□ -3.03
CHKB-CPT1BH3BT56 SNORA41B-201ENST00000384785 128 ntBASIC-3.9□□□□□ -3.03
CHKB-CPT1BH3BT56 MIR579-201ENST00000385221 98 ntBASIC-3.9□□□□□ -3.03
CHKB-CPT1BH3BT56 MIR548F1-201ENST00000408667 84 ntBASIC-3.9□□□□□ -3.03
CHKB-CPT1BH3BT56 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.9□□□□□ -3.03
CHKB-CPT1BH3BT56 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.91□□□□□ -3.04
CHKB-CPT1BH3BT56 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.91□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-971P-201ENST00000516920 106 ntBASIC-3.91□□□□□ -3.04
CHKB-CPT1BH3BT56 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.91□□□□□ -3.04
CHKB-CPT1BH3BT56 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.91□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-604P-201ENST00000390917 100 ntBASIC-3.92□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-887P-201ENST00000410660 100 ntBASIC-3.92□□□□□ -3.04
CHKB-CPT1BH3BT56 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-3.92□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-520P-201ENST00000384717 104 ntBASIC-3.93□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-537P-201ENST00000517277 103 ntBASIC-3.93□□□□□ -3.04
CHKB-CPT1BH3BT56 MIR202-201ENST00000362219 110 ntBASIC-3.94□□□□□ -3.04
CHKB-CPT1BH3BT56 RNA5SP215-201ENST00000363440 122 ntBASIC-3.94□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-828P-201ENST00000364876 107 ntBASIC-3.94□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-974P-201ENST00000384099 108 ntBASIC-3.94□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-106P-201ENST00000384405 107 ntBASIC-3.94□□□□□ -3.04
CHKB-CPT1BH3BT56 MIR3675-201ENST00000583661 73 ntBASIC-3.94□□□□□ -3.04
CHKB-CPT1BH3BT56 AL731768.1-201ENST00000603124 139 ntBASIC-3.94□□□□□ -3.04
CHKB-CPT1BH3BT56 SNORD116-10-201ENST00000363791 102 ntBASIC-3.95□□□□□ -3.04
CHKB-CPT1BH3BT56 RNU6-649P-201ENST00000384463 107 ntBASIC-3.95□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 215.9 ms