Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RNA5SP192-201ENST00000364404 120 ntBASIC-1□□□□□ -2.57
NPIPA2E9PIF3 RNU6-81P-201ENST00000365608 104 ntBASIC-1□□□□□ -2.57
NPIPA2E9PIF3 MIR521-2-201ENST00000384818 87 ntBASIC-1□□□□□ -2.57
NPIPA2E9PIF3 MIR147A-201ENST00000385079 72 ntBASIC-1□□□□□ -2.57
NPIPA2E9PIF3 RNU6-1246P-201ENST00000391064 107 ntBASIC-1□□□□□ -2.57
NPIPA2E9PIF3 AL500527.2-201ENST00000454105 95 ntBASIC-1□□□□□ -2.57
NPIPA2E9PIF3 RNU7-153P-201ENST00000516455 62 ntBASIC-1□□□□□ -2.57
NPIPA2E9PIF3 RNU6-158P-201ENST00000517104 100 ntBASIC-1□□□□□ -2.57
NPIPA2E9PIF3 AL445584.3-201ENST00000617173 78 ntBASIC-1□□□□□ -2.57
NPIPA2E9PIF3 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.01□□□□□ -2.57
NPIPA2E9PIF3 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.01□□□□□ -2.57
NPIPA2E9PIF3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.01□□□□□ -2.57
NPIPA2E9PIF3 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.01□□□□□ -2.57
NPIPA2E9PIF3 RNU6-589P-201ENST00000516485 107 ntBASIC-1.01□□□□□ -2.57
NPIPA2E9PIF3 CYP3A54P-201ENST00000566950 75 ntBASIC-1.01□□□□□ -2.57
NPIPA2E9PIF3 MIR6888-201ENST00000621977 67 ntBASIC-1.01□□□□□ -2.57
NPIPA2E9PIF3 RNU6-681P-201ENST00000364012 104 ntBASIC-1.02□□□□□ -2.57
NPIPA2E9PIF3 SNORD114-17-201ENST00000364699 75 ntBASIC-1.02□□□□□ -2.57
NPIPA2E9PIF3 MIR519C-201ENST00000385053 87 ntBASIC-1.02□□□□□ -2.57
NPIPA2E9PIF3 RNU7-154P-201ENST00000516194 62 ntBASIC-1.02□□□□□ -2.57
NPIPA2E9PIF3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.02□□□□□ -2.57
NPIPA2E9PIF3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.02□□□□□ -2.57
NPIPA2E9PIF3 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.03□□□□□ -2.57
NPIPA2E9PIF3 MTATP8P2-201ENST00000435212 202 ntBASIC-1.03□□□□□ -2.57
NPIPA2E9PIF3 MIR4499-201ENST00000584834 69 ntBASIC-1.03□□□□□ -2.57
NPIPA2E9PIF3 MIR6739-201ENST00000622461 75 ntBASIC-1.03□□□□□ -2.57
NPIPA2E9PIF3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.03□□□□□ -2.57
NPIPA2E9PIF3 RNU6-340P-201ENST00000364005 107 ntBASIC-1.04□□□□□ -2.58
NPIPA2E9PIF3 SNORD115-27-201ENST00000364430 82 ntBASIC-1.04□□□□□ -2.58
NPIPA2E9PIF3 RNU6-431P-201ENST00000383874 107 ntBASIC-1.04□□□□□ -2.58
NPIPA2E9PIF3 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.04□□□□□ -2.58
NPIPA2E9PIF3 SNORD77.2-201ENST00000391045 68 ntBASIC-1.04□□□□□ -2.58
NPIPA2E9PIF3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
NPIPA2E9PIF3 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.05□□□□□ -2.58
NPIPA2E9PIF3 RNA5SP331-201ENST00000364986 107 ntBASIC-1.05□□□□□ -2.58
NPIPA2E9PIF3 SNORD64-201ENST00000386683 67 ntBASIC-1.05□□□□□ -2.58
NPIPA2E9PIF3 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.06□□□□□ -2.58
NPIPA2E9PIF3 RNU6-924P-201ENST00000362926 108 ntBASIC-1.06□□□□□ -2.58
NPIPA2E9PIF3 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.06□□□□□ -2.58
NPIPA2E9PIF3 MIR548M-201ENST00000408260 86 ntBASIC-1.06□□□□□ -2.58
NPIPA2E9PIF3 AC140658.3-201ENST00000567603 271 ntBASIC-1.06□□□□□ -2.58
NPIPA2E9PIF3 MIR2052-201ENST00000636055 55 ntBASIC-1.06□□□□□ -2.58
NPIPA2E9PIF3 SNORD115-37-201ENST00000363768 82 ntBASIC-1.07□□□□□ -2.58
NPIPA2E9PIF3 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.07□□□□□ -2.58
NPIPA2E9PIF3 RNU6-22P-201ENST00000384355 107 ntBASIC-1.08□□□□□ -2.58
NPIPA2E9PIF3 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.08□□□□□ -2.58
NPIPA2E9PIF3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
NPIPA2E9PIF3 AL035461.1-201ENST00000421490 332 ntBASIC-1.08□□□□□ -2.58
NPIPA2E9PIF3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.08□□□□□ -2.58
NPIPA2E9PIF3 MIR4306-201ENST00000583390 91 ntBASIC-1.08□□□□□ -2.58
NPIPA2E9PIF3 uc_338.19-201ENST00000616808 99 ntBASIC-1.08□□□□□ -2.58
NPIPA2E9PIF3 MIR382-201ENST00000637119 76 ntBASIC-1.08□□□□□ -2.58
NPIPA2E9PIF3 AL021921.1-201ENST00000442774 93 ntBASIC-1.09□□□□□ -2.58
NPIPA2E9PIF3 AL031737.1-201ENST00000450125 223 ntBASIC-1.09□□□□□ -2.58
NPIPA2E9PIF3 RNU6-518P-201ENST00000516056 96 ntBASIC-1.09□□□□□ -2.58
NPIPA2E9PIF3 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.09□□□□□ -2.58
NPIPA2E9PIF3 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.09□□□□□ -2.58
NPIPA2E9PIF3 RNU6-633P-201ENST00000362612 103 ntBASIC-1.1□□□□□ -2.59
NPIPA2E9PIF3 MIR3165-201ENST00000579874 75 ntBASIC-1.1□□□□□ -2.59
NPIPA2E9PIF3 MIR4668-201ENST00000582284 70 ntBASIC-1.1□□□□□ -2.59
NPIPA2E9PIF3 MIR519A2-201ENST00000384990 87 ntBASIC-1.11□□□□□ -2.59
NPIPA2E9PIF3 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.11□□□□□ -2.59
NPIPA2E9PIF3 RNU6-479P-201ENST00000516348 105 ntBASIC-1.11□□□□□ -2.59
NPIPA2E9PIF3 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.12□□□□□ -2.59
NPIPA2E9PIF3 SNORA26.4-201ENST00000391188 123 ntBASIC-1.12□□□□□ -2.59
NPIPA2E9PIF3 SNX3P1X-201ENST00000414887 175 ntBASIC-1.12□□□□□ -2.59
NPIPA2E9PIF3 SCARNA18B-201ENST00000458806 135 ntBASIC-1.12□□□□□ -2.59
NPIPA2E9PIF3 RNU6-313P-201ENST00000516317 112 ntBASIC-1.12□□□□□ -2.59
NPIPA2E9PIF3 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.13□□□□□ -2.59
NPIPA2E9PIF3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.13□□□□□ -2.59
NPIPA2E9PIF3 MIR450A1-201ENST00000362262 91 ntBASIC-1.14□□□□□ -2.59
NPIPA2E9PIF3 SNORD115-33-201ENST00000363723 82 ntBASIC-1.14□□□□□ -2.59
NPIPA2E9PIF3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.14□□□□□ -2.59
NPIPA2E9PIF3 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.15□□□□□ -2.59
NPIPA2E9PIF3 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.15□□□□□ -2.59
NPIPA2E9PIF3 AC093729.1-201ENST00000513074 128 ntBASIC-1.15□□□□□ -2.59
NPIPA2E9PIF3 RNU6-624P-201ENST00000363411 107 ntBASIC-1.16□□□□□ -2.6
NPIPA2E9PIF3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.16□□□□□ -2.6
NPIPA2E9PIF3 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.16□□□□□ -2.6
NPIPA2E9PIF3 SNORD116-22-201ENST00000384430 92 ntBASIC-1.16□□□□□ -2.6
NPIPA2E9PIF3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.16□□□□□ -2.6
NPIPA2E9PIF3 MIR601-201ENST00000385256 79 ntBASIC-1.16□□□□□ -2.6
NPIPA2E9PIF3 RNU6-656P-201ENST00000516785 107 ntBASIC-1.16□□□□□ -2.6
NPIPA2E9PIF3 SNORA40.13-201ENST00000516379 120 ntBASIC-1.17□□□□□ -2.6
NPIPA2E9PIF3 RNU6-807P-201ENST00000516805 107 ntBASIC-1.17□□□□□ -2.6
NPIPA2E9PIF3 MALAT1.1-201ENST00000618249 95 ntBASIC-1.17□□□□□ -2.6
NPIPA2E9PIF3 MIR1468-201ENST00000410600 86 ntBASIC-1.18□□□□□ -2.6
NPIPA2E9PIF3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.18□□□□□ -2.6
NPIPA2E9PIF3 AP001318.4-201ENST00000616637 121 ntBASIC-1.18□□□□□ -2.6
NPIPA2E9PIF3 AC132825.6-201ENST00000638861 357 ntBASIC-1.18□□□□□ -2.6
NPIPA2E9PIF3 RNU2-51P-201ENST00000410708 197 ntBASIC-1.19□□□□□ -2.6
NPIPA2E9PIF3 SNORD63.1-201ENST00000516178 80 ntBASIC-1.19□□□□□ -2.6
NPIPA2E9PIF3 RNU6-557P-201ENST00000516842 110 ntBASIC-1.19□□□□□ -2.6
NPIPA2E9PIF3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.19□□□□□ -2.6
NPIPA2E9PIF3 U2.7-201ENST00000619197 100 ntBASIC-1.19□□□□□ -2.6
NPIPA2E9PIF3 RNU6-645P-201ENST00000364649 106 ntBASIC-1.2□□□□□ -2.6
NPIPA2E9PIF3 RNU6-219P-201ENST00000364728 107 ntBASIC-1.2□□□□□ -2.6
NPIPA2E9PIF3 MIR29B1-201ENST00000385015 81 ntBASIC-1.2□□□□□ -2.6
NPIPA2E9PIF3 RNY4P18-201ENST00000391107 89 ntBASIC-1.2□□□□□ -2.6
NPIPA2E9PIF3 AL353691.2-201ENST00000443795 59 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms