Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 AC138932.1-201ENST00000534164 6830 ntBASIC19.17■□□□□ 0.66
UBP1Q9NZI7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 CRYGFP-201ENST00000418459 633 ntBASIC19.16■□□□□ 0.66
UBP1Q9NZI7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 AC083906.6-201ENST00000641366 219 ntBASIC19.16■□□□□ 0.66
UBP1Q9NZI7 AL031598.1-201ENST00000561511 1773 ntBASIC19.16■□□□□ 0.66
UBP1Q9NZI7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBP1Q9NZI7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBP1Q9NZI7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBP1Q9NZI7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBP1Q9NZI7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBP1Q9NZI7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
UBP1Q9NZI7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 RBM17P1-201ENST00000453646 1190 ntBASIC19.14■□□□□ 0.65
UBP1Q9NZI7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 MIR4785-201ENST00000585005 73 ntBASIC19.14■□□□□ 0.65
UBP1Q9NZI7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 DGCR10-201ENST00000609839 495 ntBASIC19.14■□□□□ 0.65
UBP1Q9NZI7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms