Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
FOXC2Q99958 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXC2Q99958 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXC2Q99958 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXC2Q99958 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.83■□□□□ 0.12
FOXC2Q99958 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXC2Q99958 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXC2Q99958 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
FOXC2Q99958 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.83■□□□□ 0.12
FOXC2Q99958 RNPS1P1-201ENST00000507437 918 ntBASIC15.83■□□□□ 0.12
FOXC2Q99958 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXC2Q99958 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.83■□□□□ 0.12
FOXC2Q99958 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 PMS2P7-201ENST00000506558 1336 ntBASIC15.83■□□□□ 0.12
FOXC2Q99958 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
FOXC2Q99958 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXC2Q99958 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.83■□□□□ 0.12
FOXC2Q99958 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXC2Q99958 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXC2Q99958 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 AL023284.2-201ENST00000405850 579 ntBASIC15.82■□□□□ 0.12
FOXC2Q99958 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.82■□□□□ 0.12
FOXC2Q99958 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXC2Q99958 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXC2Q99958 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.82■□□□□ 0.12
FOXC2Q99958 MCCD1P1-208ENST00000445732 328 ntBASIC15.82■□□□□ 0.12
FOXC2Q99958 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.82■□□□□ 0.12
FOXC2Q99958 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 AC093909.1-201ENST00000504731 1122 ntBASIC15.82■□□□□ 0.12
FOXC2Q99958 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXC2Q99958 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.82■□□□□ 0.12
FOXC2Q99958 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
FOXC2Q99958 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.82■□□□□ 0.12
FOXC2Q99958 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.82■□□□□ 0.12
FOXC2Q99958 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.82■□□□□ 0.12
FOXC2Q99958 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
FOXC2Q99958 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
FOXC2Q99958 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
FOXC2Q99958 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXC2Q99958 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
FOXC2Q99958 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
FOXC2Q99958 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXC2Q99958 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXC2Q99958 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXC2Q99958 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXC2Q99958 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXC2Q99958 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXC2Q99958 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXC2Q99958 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
FOXC2Q99958 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXC2Q99958 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
FOXC2Q99958 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXC2Q99958 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXC2Q99958 BX842568.4-201ENST00000421222 227 ntBASIC15.81■□□□□ 0.12
FOXC2Q99958 IGHV3-47-201ENST00000425060 335 ntBASIC15.81■□□□□ 0.12
FOXC2Q99958 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
FOXC2Q99958 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXC2Q99958 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXC2Q99958 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXC2Q99958 SLC25A1P1-201ENST00000528351 927 ntBASIC15.81■□□□□ 0.12
FOXC2Q99958 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXC2Q99958 AC106730.1-201ENST00000566722 1090 ntBASIC15.81■□□□□ 0.12
FOXC2Q99958 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXC2Q99958 SMG8-203ENST00000578922 2178 ntBASIC15.81■□□□□ 0.12
FOXC2Q99958 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXC2Q99958 AC005332.3-201ENST00000589904 676 ntBASIC15.81■□□□□ 0.12
FOXC2Q99958 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXC2Q99958 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXC2Q99958 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXC2Q99958 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
FOXC2Q99958 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXC2Q99958 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXC2Q99958 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
FOXC2Q99958 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms