Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.01■□□□□ 0.31
RPS4XP62701 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
RPS4XP62701 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.01■□□□□ 0.31
RPS4XP62701 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPS4XP62701 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPS4XP62701 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.01■□□□□ 0.31
RPS4XP62701 FAM197Y1-201ENST00000421178 764 ntBASIC17.01■□□□□ 0.31
RPS4XP62701 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPS4XP62701 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.01■□□□□ 0.31
RPS4XP62701 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.01■□□□□ 0.31
RPS4XP62701 AC026271.3-201ENST00000571884 352 ntBASIC17.01■□□□□ 0.31
RPS4XP62701 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.01■□□□□ 0.31
RPS4XP62701 AC097493.4-201ENST00000641197 219 ntBASIC17.01■□□□□ 0.31
RPS4XP62701 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RPS4XP62701 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPS4XP62701 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPS4XP62701 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPS4XP62701 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.01■□□□□ 0.31
RPS4XP62701 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.01■□□□□ 0.31
RPS4XP62701 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPS4XP62701 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.01■□□□□ 0.31
RPS4XP62701 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.01■□□□□ 0.31
RPS4XP62701 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.01■□□□□ 0.31
RPS4XP62701 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPS4XP62701 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.01■□□□□ 0.31
RPS4XP62701 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RPS4XP62701 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17■□□□□ 0.31
RPS4XP62701 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17■□□□□ 0.31
RPS4XP62701 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RPS4XP62701 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17■□□□□ 0.31
RPS4XP62701 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RPS4XP62701 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17■□□□□ 0.31
RPS4XP62701 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17■□□□□ 0.31
RPS4XP62701 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17■□□□□ 0.31
RPS4XP62701 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPS4XP62701 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPS4XP62701 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.99■□□□□ 0.31
RPS4XP62701 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RPS4XP62701 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.99■□□□□ 0.31
RPS4XP62701 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.99■□□□□ 0.31
RPS4XP62701 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPS4XP62701 KRT16P1-201ENST00000399124 1418 ntBASIC16.99■□□□□ 0.31
RPS4XP62701 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RPS4XP62701 AC135050.7-201ENST00000624508 2218 ntBASIC16.99■□□□□ 0.31
RPS4XP62701 MMP23A-201ENST00000234610 1017 ntBASIC16.99■□□□□ 0.31
RPS4XP62701 AC091390.4-202ENST00000476426 537 ntBASIC16.99■□□□□ 0.31
RPS4XP62701 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.99■□□□□ 0.31
RPS4XP62701 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPS4XP62701 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RPS4XP62701 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.99■□□□□ 0.31
RPS4XP62701 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.99■□□□□ 0.31
RPS4XP62701 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RPS4XP62701 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
RPS4XP62701 AC068587.9-201ENST00000641814 219 ntBASIC16.99■□□□□ 0.31
RPS4XP62701 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
RPS4XP62701 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPS4XP62701 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RPS4XP62701 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPS4XP62701 MTMR9LP-203ENST00000426597 1545 ntBASIC16.99■□□□□ 0.31
RPS4XP62701 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPS4XP62701 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPS4XP62701 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPS4XP62701 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RPS4XP62701 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.99■□□□□ 0.31
RPS4XP62701 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPS4XP62701 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.98■□□□□ 0.31
RPS4XP62701 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.98■□□□□ 0.31
RPS4XP62701 KRT8P3-201ENST00000519669 1449 ntBASIC16.98■□□□□ 0.31
RPS4XP62701 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.98■□□□□ 0.31
RPS4XP62701 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.98■□□□□ 0.31
RPS4XP62701 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.98■□□□□ 0.31
RPS4XP62701 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RPS4XP62701 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
RPS4XP62701 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.98■□□□□ 0.31
RPS4XP62701 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.98■□□□□ 0.31
RPS4XP62701 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms