Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.74■□□□□ 0.91
ACLYP53396 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.74■□□□□ 0.91
ACLYP53396 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.74■□□□□ 0.91
ACLYP53396 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.74■□□□□ 0.91
ACLYP53396 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ACLYP53396 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.74■□□□□ 0.91
ACLYP53396 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.74■□□□□ 0.91
ACLYP53396 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ACLYP53396 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.74■□□□□ 0.91
ACLYP53396 Z82202.1-201ENST00000623446 1880 ntBASIC20.74■□□□□ 0.91
ACLYP53396 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACLYP53396 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.74■□□□□ 0.91
ACLYP53396 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ACLYP53396 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACLYP53396 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.74■□□□□ 0.91
ACLYP53396 CLDN5-201ENST00000403084 2357 ntBASIC20.73■□□□□ 0.91
ACLYP53396 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACLYP53396 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACLYP53396 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACLYP53396 AL137060.1-201ENST00000618151 2648 ntBASIC20.73■□□□□ 0.91
ACLYP53396 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.73■□□□□ 0.91
ACLYP53396 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ACLYP53396 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.73■□□□□ 0.91
ACLYP53396 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.73■□□□□ 0.91
ACLYP53396 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.73■□□□□ 0.91
ACLYP53396 AC120114.3-201ENST00000611923 658 ntBASIC20.73■□□□□ 0.91
ACLYP53396 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.73■□□□□ 0.91
ACLYP53396 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.73■□□□□ 0.91
ACLYP53396 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACLYP53396 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACLYP53396 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACLYP53396 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.73■□□□□ 0.91
ACLYP53396 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.73■□□□□ 0.91
ACLYP53396 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACLYP53396 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACLYP53396 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
ACLYP53396 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.72■□□□□ 0.91
ACLYP53396 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.72■□□□□ 0.91
ACLYP53396 IGHGP-201ENST00000390555 1178 ntBASIC20.72■□□□□ 0.91
ACLYP53396 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 AP000593.1-201ENST00000393668 712 ntBASIC20.72■□□□□ 0.91
ACLYP53396 TSPY12P-201ENST00000421279 868 ntBASIC20.72■□□□□ 0.91
ACLYP53396 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.72■□□□□ 0.91
ACLYP53396 AL671883.3-201ENST00000603274 991 ntBASIC20.72■□□□□ 0.91
ACLYP53396 AL592071.1-201ENST00000611956 408 ntBASIC20.72■□□□□ 0.91
ACLYP53396 BX640515.1-201ENST00000617215 977 ntBASIC20.72■□□□□ 0.91
ACLYP53396 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.72■□□□□ 0.91
ACLYP53396 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.72■□□□□ 0.91
ACLYP53396 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACLYP53396 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.71■□□□□ 0.91
ACLYP53396 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACLYP53396 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ACLYP53396 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ACLYP53396 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACLYP53396 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ACLYP53396 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACLYP53396 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ACLYP53396 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACLYP53396 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
ACLYP53396 RN7SL606P-201ENST00000472779 293 ntBASIC20.71■□□□□ 0.91
ACLYP53396 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.71■□□□□ 0.91
ACLYP53396 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.71■□□□□ 0.91
ACLYP53396 AC124864.1-201ENST00000623408 392 ntBASIC20.71■□□□□ 0.91
ACLYP53396 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.71■□□□□ 0.91
ACLYP53396 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ACLYP53396 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ACLYP53396 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACLYP53396 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.71■□□□□ 0.91
ACLYP53396 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACLYP53396 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.7■□□□□ 0.91
ACLYP53396 TEX21P-204ENST00000641479 1693 ntBASIC20.7■□□□□ 0.91
ACLYP53396 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACLYP53396 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACLYP53396 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACLYP53396 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACLYP53396 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACLYP53396 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
ACLYP53396 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.7■□□□□ 0.9
ACLYP53396 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
ACLYP53396 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
ACLYP53396 AL590627.1-203ENST00000421194 1026 ntBASIC20.7■□□□□ 0.9
ACLYP53396 SAPCD2P3-201ENST00000455031 850 ntBASIC20.7■□□□□ 0.9
ACLYP53396 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACLYP53396 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
ACLYP53396 GUSBP12-201ENST00000513727 720 ntBASIC20.7■□□□□ 0.9
ACLYP53396 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACLYP53396 MIR3180-4-201ENST00000582223 153 ntBASIC20.7■□□□□ 0.9
ACLYP53396 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ACLYP53396 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms