Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.24■□□□□ 0.19
CD40P25942 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.24■□□□□ 0.19
CD40P25942 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.24■□□□□ 0.19
CD40P25942 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CD40P25942 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.24■□□□□ 0.19
CD40P25942 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.24■□□□□ 0.19
CD40P25942 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.24■□□□□ 0.19
CD40P25942 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 AL109659.2-201ENST00000606809 1674 ntBASIC16.24■□□□□ 0.19
CD40P25942 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CD40P25942 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.23■□□□□ 0.19
CD40P25942 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.23■□□□□ 0.19
CD40P25942 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
CD40P25942 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.23■□□□□ 0.19
CD40P25942 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.23■□□□□ 0.19
CD40P25942 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.23■□□□□ 0.19
CD40P25942 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.23■□□□□ 0.19
CD40P25942 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.23■□□□□ 0.19
CD40P25942 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.23■□□□□ 0.19
CD40P25942 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.23■□□□□ 0.19
CD40P25942 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.23■□□□□ 0.19
CD40P25942 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.23■□□□□ 0.19
CD40P25942 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.23■□□□□ 0.19
CD40P25942 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD40P25942 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.23■□□□□ 0.19
CD40P25942 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CD40P25942 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.22■□□□□ 0.19
CD40P25942 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.22■□□□□ 0.19
CD40P25942 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.22■□□□□ 0.19
CD40P25942 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.22■□□□□ 0.19
CD40P25942 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CD40P25942 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.22■□□□□ 0.19
CD40P25942 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 STARP1-201ENST00000397973 869 ntBASIC16.22■□□□□ 0.19
CD40P25942 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.22■□□□□ 0.19
CD40P25942 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.22■□□□□ 0.19
CD40P25942 KRT18P38-201ENST00000449496 1282 ntBASIC16.22■□□□□ 0.19
CD40P25942 AL671277.2-201ENST00000458060 996 ntBASIC16.22■□□□□ 0.19
CD40P25942 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.22■□□□□ 0.19
CD40P25942 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CD40P25942 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.22■□□□□ 0.19
CD40P25942 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CD40P25942 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CD40P25942 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD40P25942 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.21■□□□□ 0.19
CD40P25942 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD40P25942 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD40P25942 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD40P25942 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.21■□□□□ 0.19
CD40P25942 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD40P25942 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CD40P25942 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD40P25942 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CD40P25942 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD40P25942 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.21■□□□□ 0.19
CD40P25942 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.21■□□□□ 0.19
CD40P25942 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD40P25942 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.21■□□□□ 0.19
CD40P25942 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.21■□□□□ 0.19
CD40P25942 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD40P25942 AC024243.1-201ENST00000609234 778 ntBASIC16.21■□□□□ 0.19
CD40P25942 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD40P25942 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD40P25942 KRT8P32-201ENST00000512863 1461 ntBASIC16.21■□□□□ 0.19
CD40P25942 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms