Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SMPD1P17405 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMPD1P17405 Z83836.1-201ENST00000624605 1642 ntBASIC20.96■□□□□ 0.95
SMPD1P17405 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMPD1P17405 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SMPD1P17405 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.95■□□□□ 0.94
SMPD1P17405 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.95■□□□□ 0.94
SMPD1P17405 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SMPD1P17405 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.95■□□□□ 0.94
SMPD1P17405 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 LINC00265-3P-201ENST00000447588 903 ntBASIC20.95■□□□□ 0.94
SMPD1P17405 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 AP000867.3-201ENST00000524675 377 ntBASIC20.95■□□□□ 0.94
SMPD1P17405 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.95■□□□□ 0.94
SMPD1P17405 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SMPD1P17405 AC005332.3-201ENST00000589904 676 ntBASIC20.95■□□□□ 0.94
SMPD1P17405 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SMPD1P17405 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.95■□□□□ 0.94
SMPD1P17405 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.95■□□□□ 0.94
SMPD1P17405 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.95■□□□□ 0.94
SMPD1P17405 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD1P17405 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.94■□□□□ 0.94
SMPD1P17405 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.94■□□□□ 0.94
SMPD1P17405 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMPD1P17405 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMPD1P17405 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMPD1P17405 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMPD1P17405 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.94■□□□□ 0.94
SMPD1P17405 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
SMPD1P17405 TSPY19P-201ENST00000418461 509 ntBASIC20.94■□□□□ 0.94
SMPD1P17405 TSPY18P-201ENST00000441642 509 ntBASIC20.94■□□□□ 0.94
SMPD1P17405 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.94■□□□□ 0.94
SMPD1P17405 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.94■□□□□ 0.94
SMPD1P17405 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.94■□□□□ 0.94
SMPD1P17405 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.94■□□□□ 0.94
SMPD1P17405 IFNL4P1-201ENST00000607083 540 ntBASIC20.94■□□□□ 0.94
SMPD1P17405 AL732292.2-201ENST00000609649 430 ntBASIC20.94■□□□□ 0.94
SMPD1P17405 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SMPD1P17405 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SMPD1P17405 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.94■□□□□ 0.94
SMPD1P17405 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMPD1P17405 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMPD1P17405 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMPD1P17405 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMPD1P17405 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SMPD1P17405 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMPD1P17405 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.94■□□□□ 0.94
SMPD1P17405 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.94■□□□□ 0.94
SMPD1P17405 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
SMPD1P17405 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SMPD1P17405 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.94■□□□□ 0.94
SMPD1P17405 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SMPD1P17405 AC006333.2-201ENST00000607957 2099 ntBASIC20.93■□□□□ 0.94
SMPD1P17405 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.93■□□□□ 0.94
SMPD1P17405 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SMPD1P17405 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMPD1P17405 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMPD1P17405 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMPD1P17405 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMPD1P17405 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.93■□□□□ 0.94
SMPD1P17405 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMPD1P17405 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMPD1P17405 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.93■□□□□ 0.94
SMPD1P17405 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SMPD1P17405 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.93■□□□□ 0.94
SMPD1P17405 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMPD1P17405 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.93■□□□□ 0.94
SMPD1P17405 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SMPD1P17405 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMPD1P17405 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMPD1P17405 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SMPD1P17405 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SMPD1P17405 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.93■□□□□ 0.94
SMPD1P17405 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMPD1P17405 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMPD1P17405 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.92■□□□□ 0.94
SMPD1P17405 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.92■□□□□ 0.94
SMPD1P17405 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMPD1P17405 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMPD1P17405 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.92■□□□□ 0.94
SMPD1P17405 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMPD1P17405 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.92■□□□□ 0.94
SMPD1P17405 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SMPD1P17405 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.92■□□□□ 0.94
SMPD1P17405 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMPD1P17405 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMPD1P17405 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms