Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL2A1P02458 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
COL2A1P02458 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL2A1P02458 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL2A1P02458 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.99■■□□□ 1.11
COL2A1P02458 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL2A1P02458 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL2A1P02458 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL2A1P02458 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.99■■□□□ 1.11
COL2A1P02458 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.99■■□□□ 1.11
COL2A1P02458 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.99■■□□□ 1.11
COL2A1P02458 GPR32P1-201ENST00000601788 811 ntBASIC21.99■■□□□ 1.11
COL2A1P02458 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.99■■□□□ 1.11
COL2A1P02458 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL2A1P02458 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL2A1P02458 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL2A1P02458 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL2A1P02458 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.99■■□□□ 1.11
COL2A1P02458 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.99■■□□□ 1.11
COL2A1P02458 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
COL2A1P02458 AL158211.5-201ENST00000623583 2518 ntBASIC21.99■■□□□ 1.11
COL2A1P02458 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL2A1P02458 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
COL2A1P02458 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL2A1P02458 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL2A1P02458 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL2A1P02458 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL2A1P02458 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL2A1P02458 AC111152.3-201ENST00000569699 673 ntBASIC21.98■■□□□ 1.11
COL2A1P02458 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL2A1P02458 KRT8P50-201ENST00000562022 1438 ntBASIC21.98■■□□□ 1.11
COL2A1P02458 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL2A1P02458 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL2A1P02458 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.98■■□□□ 1.11
COL2A1P02458 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
COL2A1P02458 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL2A1P02458 Z83836.1-201ENST00000624605 1642 ntBASIC21.97■■□□□ 1.11
COL2A1P02458 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL2A1P02458 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL2A1P02458 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.97■■□□□ 1.11
COL2A1P02458 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
COL2A1P02458 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.97■■□□□ 1.11
COL2A1P02458 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL2A1P02458 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.97■■□□□ 1.11
COL2A1P02458 AC012615.1-201ENST00000565797 1299 ntBASIC21.97■■□□□ 1.11
COL2A1P02458 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.97■■□□□ 1.11
COL2A1P02458 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL2A1P02458 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.97■■□□□ 1.11
COL2A1P02458 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL2A1P02458 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.97■■□□□ 1.11
COL2A1P02458 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
COL2A1P02458 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL2A1P02458 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL2A1P02458 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL2A1P02458 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.97■■□□□ 1.11
COL2A1P02458 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL2A1P02458 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
COL2A1P02458 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL2A1P02458 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
COL2A1P02458 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL2A1P02458 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
COL2A1P02458 NUS1P1-201ENST00000446295 882 ntBASIC21.96■■□□□ 1.11
COL2A1P02458 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.96■■□□□ 1.11
COL2A1P02458 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL2A1P02458 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.96■■□□□ 1.11
COL2A1P02458 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.96■■□□□ 1.11
COL2A1P02458 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL2A1P02458 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL2A1P02458 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.96■■□□□ 1.11
COL2A1P02458 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.96■■□□□ 1.11
COL2A1P02458 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL2A1P02458 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL2A1P02458 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.96■■□□□ 1.11
COL2A1P02458 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.96■■□□□ 1.11
COL2A1P02458 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL2A1P02458 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
COL2A1P02458 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL2A1P02458 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.96■■□□□ 1.11
COL2A1P02458 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL2A1P02458 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.96■■□□□ 1.11
COL2A1P02458 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL2A1P02458 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.96■■□□□ 1.11
COL2A1P02458 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL2A1P02458 AP000593.1-201ENST00000393668 712 ntBASIC21.96■■□□□ 1.11
COL2A1P02458 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.96■■□□□ 1.11
COL2A1P02458 AP003733.1-201ENST00000491725 852 ntBASIC21.96■■□□□ 1.11
COL2A1P02458 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
COL2A1P02458 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL2A1P02458 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL2A1P02458 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
COL2A1P02458 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
COL2A1P02458 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL2A1P02458 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.95■■□□□ 1.1
COL2A1P02458 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.95■■□□□ 1.1
COL2A1P02458 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.95■■□□□ 1.1
COL2A1P02458 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
COL2A1P02458 KRT18P1-202ENST00000452408 1331 ntBASIC21.95■■□□□ 1.1
COL2A1P02458 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL2A1P02458 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL2A1P02458 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms