Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 AC099336.1-202ENST00000602961 463 ntBASIC18.4■□□□□ 0.54
C4orf47A7E2U8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
C4orf47A7E2U8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
C4orf47A7E2U8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
C4orf47A7E2U8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.39■□□□□ 0.54
C4orf47A7E2U8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 Z83836.1-201ENST00000624605 1642 ntBASIC18.39■□□□□ 0.53
C4orf47A7E2U8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 MIR3917-201ENST00000580971 93 ntBASIC18.39■□□□□ 0.53
C4orf47A7E2U8 MIR3180-5-201ENST00000583743 153 ntBASIC18.39■□□□□ 0.53
C4orf47A7E2U8 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 IGHV3-41-201ENST00000613121 348 ntBASIC18.39■□□□□ 0.53
C4orf47A7E2U8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 AC112497.1-201ENST00000624824 639 ntBASIC18.39■□□□□ 0.53
C4orf47A7E2U8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C4orf47A7E2U8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 AC092865.5-201ENST00000545435 363 ntBASIC18.38■□□□□ 0.53
C4orf47A7E2U8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 AC090616.6-201ENST00000582640 721 ntBASIC18.38■□□□□ 0.53
C4orf47A7E2U8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 IL9RP2-201ENST00000423948 1312 ntBASIC18.38■□□□□ 0.53
C4orf47A7E2U8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C4orf47A7E2U8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 MCCD1P1-208ENST00000445732 328 ntBASIC18.37■□□□□ 0.53
C4orf47A7E2U8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms