Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC138207.3-201ENST00000585289 166 ntBASIC-1.43□□□□□ -2.64
VCX3AQ9NNX9 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.43□□□□□ -2.64
VCX3AQ9NNX9 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.44□□□□□ -2.64
VCX3AQ9NNX9 MIR519A2-201ENST00000384990 87 ntBASIC-1.44□□□□□ -2.64
VCX3AQ9NNX9 RNU2-51P-201ENST00000410708 197 ntBASIC-1.44□□□□□ -2.64
VCX3AQ9NNX9 MTND4LP9-201ENST00000427694 174 ntBASIC-1.44□□□□□ -2.64
VCX3AQ9NNX9 RNU6-518P-201ENST00000516056 96 ntBASIC-1.44□□□□□ -2.64
VCX3AQ9NNX9 RNU6-574P-201ENST00000384265 107 ntBASIC-1.45□□□□□ -2.64
VCX3AQ9NNX9 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.45□□□□□ -2.64
VCX3AQ9NNX9 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.45□□□□□ -2.64
VCX3AQ9NNX9 AC004792.1-201ENST00000614523 137 ntBASIC-1.45□□□□□ -2.64
VCX3AQ9NNX9 MIR6739-201ENST00000622461 75 ntBASIC-1.45□□□□□ -2.64
VCX3AQ9NNX9 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.46□□□□□ -2.64
VCX3AQ9NNX9 RNU6-732P-201ENST00000516033 103 ntBASIC-1.46□□□□□ -2.64
VCX3AQ9NNX9 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.46□□□□□ -2.64
VCX3AQ9NNX9 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.46□□□□□ -2.64
VCX3AQ9NNX9 MIR4796-201ENST00000580742 81 ntBASIC-1.46□□□□□ -2.64
VCX3AQ9NNX9 RNA5SP26-201ENST00000362406 119 ntBASIC-1.47□□□□□ -2.64
VCX3AQ9NNX9 SNORD58A-201ENST00000383875 65 ntBASIC-1.47□□□□□ -2.64
VCX3AQ9NNX9 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.47□□□□□ -2.64
VCX3AQ9NNX9 MIR507-201ENST00000385234 94 ntBASIC-1.47□□□□□ -2.64
VCX3AQ9NNX9 RNU6-972P-201ENST00000391208 107 ntBASIC-1.47□□□□□ -2.64
VCX3AQ9NNX9 AL021921.1-201ENST00000442774 93 ntBASIC-1.47□□□□□ -2.64
VCX3AQ9NNX9 RNU6-752P-201ENST00000516376 102 ntBASIC-1.47□□□□□ -2.64
VCX3AQ9NNX9 RNU6-80P-201ENST00000384195 107 ntBASIC-1.48□□□□□ -2.65
VCX3AQ9NNX9 RNU6-887P-201ENST00000410660 100 ntBASIC-1.48□□□□□ -2.65
VCX3AQ9NNX9 RNU7-107P-201ENST00000459121 61 ntBASIC-1.48□□□□□ -2.65
VCX3AQ9NNX9 SNORD33.1-201ENST00000516213 88 ntBASIC-1.48□□□□□ -2.65
VCX3AQ9NNX9 MTND5P41-201ENST00000517498 206 ntBASIC-1.48□□□□□ -2.65
VCX3AQ9NNX9 AC026421.1-201ENST00000519101 163 ntBASIC-1.48□□□□□ -2.65
VCX3AQ9NNX9 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.49□□□□□ -2.65
VCX3AQ9NNX9 RNU6-10P-201ENST00000384036 107 ntBASIC-1.49□□□□□ -2.65
VCX3AQ9NNX9 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.49□□□□□ -2.65
VCX3AQ9NNX9 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.49□□□□□ -2.65
VCX3AQ9NNX9 SNORA19.1-201ENST00000410656 129 ntBASIC-1.49□□□□□ -2.65
VCX3AQ9NNX9 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.49□□□□□ -2.65
VCX3AQ9NNX9 MIR3914-2-201ENST00000637339 95 ntBASIC-1.49□□□□□ -2.65
VCX3AQ9NNX9 MIR587-201ENST00000384845 96 ntBASIC-1.5□□□□□ -2.65
VCX3AQ9NNX9 SNORA40-201ENST00000388090 126 ntBASIC-1.5□□□□□ -2.65
VCX3AQ9NNX9 MIR8485-201ENST00000401372 91 ntBASIC-1.5□□□□□ -2.65
VCX3AQ9NNX9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.5□□□□□ -2.65
VCX3AQ9NNX9 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.5□□□□□ -2.65
VCX3AQ9NNX9 MIR3165-201ENST00000579874 75 ntBASIC-1.5□□□□□ -2.65
VCX3AQ9NNX9 RNU6-379P-201ENST00000363813 104 ntBASIC-1.51□□□□□ -2.65
VCX3AQ9NNX9 SCARNA23-201ENST00000516060 130 ntBASIC-1.51□□□□□ -2.65
VCX3AQ9NNX9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.51□□□□□ -2.65
VCX3AQ9NNX9 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.52□□□□□ -2.65
VCX3AQ9NNX9 SNORD116-10-201ENST00000363791 102 ntBASIC-1.52□□□□□ -2.65
VCX3AQ9NNX9 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.52□□□□□ -2.65
VCX3AQ9NNX9 RNA5SP192-201ENST00000364404 120 ntBASIC-1.52□□□□□ -2.65
VCX3AQ9NNX9 RNU6-164P-201ENST00000364604 103 ntBASIC-1.52□□□□□ -2.65
VCX3AQ9NNX9 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.52□□□□□ -2.65
VCX3AQ9NNX9 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.52□□□□□ -2.65
VCX3AQ9NNX9 MIR889-201ENST00000401280 79 ntBASIC-1.52□□□□□ -2.65
VCX3AQ9NNX9 MIR4490-201ENST00000582647 84 ntBASIC-1.52□□□□□ -2.65
VCX3AQ9NNX9 AC091912.2-201ENST00000624798 167 ntBASIC-1.52□□□□□ -2.65
VCX3AQ9NNX9 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.53□□□□□ -2.65
VCX3AQ9NNX9 RNU6-257P-201ENST00000410238 98 ntBASIC-1.53□□□□□ -2.65
VCX3AQ9NNX9 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.53□□□□□ -2.65
VCX3AQ9NNX9 AL450471.1-201ENST00000447509 127 ntBASIC-1.53□□□□□ -2.65
VCX3AQ9NNX9 RNU7-88P-201ENST00000458752 63 ntBASIC-1.53□□□□□ -2.65
VCX3AQ9NNX9 RNU6-904P-201ENST00000516206 101 ntBASIC-1.53□□□□□ -2.65
VCX3AQ9NNX9 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.53□□□□□ -2.65
VCX3AQ9NNX9 RNU6-388P-201ENST00000517012 105 ntBASIC-1.53□□□□□ -2.65
VCX3AQ9NNX9 RNU6-389P-201ENST00000517048 105 ntBASIC-1.53□□□□□ -2.65
VCX3AQ9NNX9 AP002795.1-201ENST00000534879 84 ntBASIC-1.53□□□□□ -2.65
VCX3AQ9NNX9 MIR548AG1-201ENST00000579932 66 ntBASIC-1.53□□□□□ -2.65
VCX3AQ9NNX9 MIR5683-201ENST00000636514 76 ntBASIC-1.53□□□□□ -2.65
VCX3AQ9NNX9 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.54□□□□□ -2.66
VCX3AQ9NNX9 RNU6-246P-201ENST00000384702 107 ntBASIC-1.54□□□□□ -2.66
VCX3AQ9NNX9 MIR548A3-201ENST00000385297 97 ntBASIC-1.54□□□□□ -2.66
VCX3AQ9NNX9 MIR1236-201ENST00000408340 102 ntBASIC-1.54□□□□□ -2.66
VCX3AQ9NNX9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.54□□□□□ -2.66
VCX3AQ9NNX9 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.54□□□□□ -2.66
VCX3AQ9NNX9 RNA5SP395-201ENST00000516567 118 ntBASIC-1.54□□□□□ -2.66
VCX3AQ9NNX9 U7.5-201ENST00000517224 61 ntBASIC-1.54□□□□□ -2.66
VCX3AQ9NNX9 AL353621.2-201ENST00000605340 133 ntBASIC-1.54□□□□□ -2.66
VCX3AQ9NNX9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
VCX3AQ9NNX9 SNORD19-201ENST00000391191 68 ntBASIC-1.55□□□□□ -2.66
VCX3AQ9NNX9 snoU13.19-201ENST00000459148 104 ntBASIC-1.55□□□□□ -2.66
VCX3AQ9NNX9 MIR3115-201ENST00000577915 68 ntBASIC-1.55□□□□□ -2.66
VCX3AQ9NNX9 U6.95-201ENST00000636931 70 ntBASIC-1.55□□□□□ -2.66
VCX3AQ9NNX9 MIR6086-201ENST00000638065 55 ntBASIC-1.55□□□□□ -2.66
VCX3AQ9NNX9 RNU6-463P-201ENST00000384340 107 ntBASIC-1.56□□□□□ -2.66
VCX3AQ9NNX9 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.56□□□□□ -2.66
VCX3AQ9NNX9 HLA-S-202ENST00000425174 53 ntBASIC-1.56□□□□□ -2.66
VCX3AQ9NNX9 RNU6-537P-201ENST00000517277 103 ntBASIC-1.56□□□□□ -2.66
VCX3AQ9NNX9 MIR6874-201ENST00000635894 71 ntBASIC-1.56□□□□□ -2.66
VCX3AQ9NNX9 RNU6-774P-201ENST00000363238 107 ntBASIC-1.57□□□□□ -2.66
VCX3AQ9NNX9 RNU6-340P-201ENST00000364005 107 ntBASIC-1.57□□□□□ -2.66
VCX3AQ9NNX9 RNU6-656P-201ENST00000516785 107 ntBASIC-1.57□□□□□ -2.66
VCX3AQ9NNX9 RNU6-807P-201ENST00000516805 107 ntBASIC-1.57□□□□□ -2.66
VCX3AQ9NNX9 U2.7-201ENST00000619197 100 ntBASIC-1.57□□□□□ -2.66
VCX3AQ9NNX9 RNU6-30P-201ENST00000384561 107 ntBASIC-1.58□□□□□ -2.66
VCX3AQ9NNX9 AL078595.1-201ENST00000404458 226 ntBASIC-1.58□□□□□ -2.66
VCX3AQ9NNX9 AL035461.1-201ENST00000421490 332 ntBASIC-1.58□□□□□ -2.66
VCX3AQ9NNX9 RNU6-971P-201ENST00000516920 106 ntBASIC-1.58□□□□□ -2.66
VCX3AQ9NNX9 MIR5591-201ENST00000578248 65 ntBASIC-1.58□□□□□ -2.66
VCX3AQ9NNX9 MIR4520-1-201ENST00000582609 70 ntBASIC-1.58□□□□□ -2.66
VCX3AQ9NNX9 RNU6-681P-201ENST00000364012 104 ntBASIC-1.59□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms