Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.38□□□□□ -2.63
NUDCD3Q8IVD9 SNORA33.1-201ENST00000364957 130 ntBASIC-1.38□□□□□ -2.63
NUDCD3Q8IVD9 SNORD58A-201ENST00000383875 65 ntBASIC-1.38□□□□□ -2.63
NUDCD3Q8IVD9 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.38□□□□□ -2.63
NUDCD3Q8IVD9 RNU6-972P-201ENST00000391208 107 ntBASIC-1.38□□□□□ -2.63
NUDCD3Q8IVD9 uc_338.19-201ENST00000616808 99 ntBASIC-1.38□□□□□ -2.63
NUDCD3Q8IVD9 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.39□□□□□ -2.63
NUDCD3Q8IVD9 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.39□□□□□ -2.63
NUDCD3Q8IVD9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.39□□□□□ -2.63
NUDCD3Q8IVD9 AC140658.3-201ENST00000567603 271 ntBASIC-1.39□□□□□ -2.63
NUDCD3Q8IVD9 MIR6888-201ENST00000621977 67 ntBASIC-1.39□□□□□ -2.63
NUDCD3Q8IVD9 SNORA2.1-201ENST00000363089 137 ntBASIC-1.4□□□□□ -2.63
NUDCD3Q8IVD9 RNU6-10P-201ENST00000384036 107 ntBASIC-1.4□□□□□ -2.63
NUDCD3Q8IVD9 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.4□□□□□ -2.63
NUDCD3Q8IVD9 SNORA19.1-201ENST00000410656 129 ntBASIC-1.4□□□□□ -2.63
NUDCD3Q8IVD9 RNU6-887P-201ENST00000410660 100 ntBASIC-1.4□□□□□ -2.63
NUDCD3Q8IVD9 SCARNA23-201ENST00000516060 130 ntBASIC-1.4□□□□□ -2.63
NUDCD3Q8IVD9 RNU6-659P-201ENST00000516454 104 ntBASIC-1.4□□□□□ -2.63
NUDCD3Q8IVD9 MIR3657-201ENST00000584818 117 ntBASIC-1.4□□□□□ -2.63
NUDCD3Q8IVD9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.4□□□□□ -2.63
NUDCD3Q8IVD9 AL445584.3-201ENST00000617173 78 ntBASIC-1.4□□□□□ -2.63
NUDCD3Q8IVD9 MIR382-201ENST00000637119 76 ntBASIC-1.4□□□□□ -2.63
NUDCD3Q8IVD9 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.41□□□□□ -2.64
NUDCD3Q8IVD9 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.41□□□□□ -2.64
NUDCD3Q8IVD9 MIR1255B2-201ENST00000408618 67 ntBASIC-1.41□□□□□ -2.64
NUDCD3Q8IVD9 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.41□□□□□ -2.64
NUDCD3Q8IVD9 AC026421.1-201ENST00000519101 163 ntBASIC-1.41□□□□□ -2.64
NUDCD3Q8IVD9 MIR587-201ENST00000384845 96 ntBASIC-1.42□□□□□ -2.64
NUDCD3Q8IVD9 AL691482.2-201ENST00000457453 84 ntBASIC-1.42□□□□□ -2.64
NUDCD3Q8IVD9 RNA5SP470-201ENST00000516463 106 ntBASIC-1.42□□□□□ -2.64
NUDCD3Q8IVD9 RNU6-255P-201ENST00000516957 105 ntBASIC-1.42□□□□□ -2.64
NUDCD3Q8IVD9 MIR4499-201ENST00000584834 69 ntBASIC-1.42□□□□□ -2.64
NUDCD3Q8IVD9 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.43□□□□□ -2.64
NUDCD3Q8IVD9 RNY1P5-201ENST00000383890 115 ntBASIC-1.43□□□□□ -2.64
NUDCD3Q8IVD9 RNU6-274P-201ENST00000459566 107 ntBASIC-1.43□□□□□ -2.64
NUDCD3Q8IVD9 HAR1A.1-201ENST00000459583 118 ntBASIC-1.43□□□□□ -2.64
NUDCD3Q8IVD9 RNU6-904P-201ENST00000516206 101 ntBASIC-1.43□□□□□ -2.64
NUDCD3Q8IVD9 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.44□□□□□ -2.64
NUDCD3Q8IVD9 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.44□□□□□ -2.64
NUDCD3Q8IVD9 RNU6-880P-201ENST00000384526 107 ntBASIC-1.44□□□□□ -2.64
NUDCD3Q8IVD9 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.44□□□□□ -2.64
NUDCD3Q8IVD9 CYP3A54P-201ENST00000566950 75 ntBASIC-1.44□□□□□ -2.64
NUDCD3Q8IVD9 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.45□□□□□ -2.64
NUDCD3Q8IVD9 SCARNA18B-201ENST00000458806 135 ntBASIC-1.45□□□□□ -2.64
NUDCD3Q8IVD9 RNU6-412P-201ENST00000516434 106 ntBASIC-1.45□□□□□ -2.64
NUDCD3Q8IVD9 snoU83B.1-201ENST00000517136 88 ntBASIC-1.45□□□□□ -2.64
NUDCD3Q8IVD9 MIR4796-201ENST00000580742 81 ntBASIC-1.45□□□□□ -2.64
NUDCD3Q8IVD9 U6.81-201ENST00000612550 106 ntBASIC-1.45□□□□□ -2.64
NUDCD3Q8IVD9 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.46□□□□□ -2.64
NUDCD3Q8IVD9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.46□□□□□ -2.64
NUDCD3Q8IVD9 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.46□□□□□ -2.64
NUDCD3Q8IVD9 SNORD116-10-201ENST00000363791 102 ntBASIC-1.47□□□□□ -2.64
NUDCD3Q8IVD9 SNORD116-21-201ENST00000384507 92 ntBASIC-1.47□□□□□ -2.64
NUDCD3Q8IVD9 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.47□□□□□ -2.64
NUDCD3Q8IVD9 RNY1P9-201ENST00000532431 109 ntBASIC-1.47□□□□□ -2.64
NUDCD3Q8IVD9 RNU6-907P-201ENST00000390924 102 ntBASIC-1.48□□□□□ -2.65
NUDCD3Q8IVD9 SNORD57-201ENST00000448188 72 ntBASIC-1.48□□□□□ -2.65
NUDCD3Q8IVD9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.49□□□□□ -2.65
NUDCD3Q8IVD9 RNU6-924P-201ENST00000362926 108 ntBASIC-1.5□□□□□ -2.65
NUDCD3Q8IVD9 MIR521-2-201ENST00000384818 87 ntBASIC-1.5□□□□□ -2.65
NUDCD3Q8IVD9 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.5□□□□□ -2.65
NUDCD3Q8IVD9 MIR378F-201ENST00000578143 78 ntBASIC-1.5□□□□□ -2.65
NUDCD3Q8IVD9 RNU6-24P-201ENST00000384440 107 ntBASIC-1.51□□□□□ -2.65
NUDCD3Q8IVD9 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.51□□□□□ -2.65
NUDCD3Q8IVD9 MIR1236-201ENST00000408340 102 ntBASIC-1.51□□□□□ -2.65
NUDCD3Q8IVD9 RNU7-61P-201ENST00000515897 61 ntBASIC-1.51□□□□□ -2.65
NUDCD3Q8IVD9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.51□□□□□ -2.65
NUDCD3Q8IVD9 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.52□□□□□ -2.65
NUDCD3Q8IVD9 RNU6-537P-201ENST00000517277 103 ntBASIC-1.52□□□□□ -2.65
NUDCD3Q8IVD9 SNORD116-14-201ENST00000383894 92 ntBASIC-1.53□□□□□ -2.65
NUDCD3Q8IVD9 SNORD116-17-201ENST00000383929 92 ntBASIC-1.53□□□□□ -2.65
NUDCD3Q8IVD9 SNORD116-15-201ENST00000384445 92 ntBASIC-1.53□□□□□ -2.65
NUDCD3Q8IVD9 SNORD116-19-201ENST00000384729 92 ntBASIC-1.53□□□□□ -2.65
NUDCD3Q8IVD9 MIR590-201ENST00000385008 97 ntBASIC-1.53□□□□□ -2.65
NUDCD3Q8IVD9 RNA5SP192-201ENST00000364404 120 ntBASIC-1.54□□□□□ -2.66
NUDCD3Q8IVD9 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.54□□□□□ -2.66
NUDCD3Q8IVD9 RNU7-154P-201ENST00000516194 62 ntBASIC-1.54□□□□□ -2.66
NUDCD3Q8IVD9 MIR3165-201ENST00000579874 75 ntBASIC-1.54□□□□□ -2.66
NUDCD3Q8IVD9 AL450471.1-201ENST00000447509 127 ntBASIC-1.55□□□□□ -2.66
NUDCD3Q8IVD9 AC090425.1-201ENST00000610007 140 ntBASIC-1.55□□□□□ -2.66
NUDCD3Q8IVD9 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.56□□□□□ -2.66
NUDCD3Q8IVD9 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.56□□□□□ -2.66
NUDCD3Q8IVD9 MIR1302-5-201ENST00000408164 150 ntBASIC-1.56□□□□□ -2.66
NUDCD3Q8IVD9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.56□□□□□ -2.66
NUDCD3Q8IVD9 RNU6-752P-201ENST00000516376 102 ntBASIC-1.56□□□□□ -2.66
NUDCD3Q8IVD9 RNU7-153P-201ENST00000516455 62 ntBASIC-1.56□□□□□ -2.66
NUDCD3Q8IVD9 MIR6739-201ENST00000622461 75 ntBASIC-1.56□□□□□ -2.66
NUDCD3Q8IVD9 MIR519A2-201ENST00000384990 87 ntBASIC-1.57□□□□□ -2.66
NUDCD3Q8IVD9 SNORA26.4-201ENST00000391188 123 ntBASIC-1.57□□□□□ -2.66
NUDCD3Q8IVD9 SNORD63.1-201ENST00000516178 80 ntBASIC-1.57□□□□□ -2.66
NUDCD3Q8IVD9 RNU6-162P-201ENST00000516228 103 ntBASIC-1.57□□□□□ -2.66
NUDCD3Q8IVD9 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.58□□□□□ -2.66
NUDCD3Q8IVD9 RNU6-746P-201ENST00000384112 109 ntBASIC-1.58□□□□□ -2.66
NUDCD3Q8IVD9 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.58□□□□□ -2.66
NUDCD3Q8IVD9 RNU6-518P-201ENST00000516056 96 ntBASIC-1.58□□□□□ -2.66
NUDCD3Q8IVD9 SNORD115-33-201ENST00000363723 82 ntBASIC-1.59□□□□□ -2.66
NUDCD3Q8IVD9 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.59□□□□□ -2.66
NUDCD3Q8IVD9 MIR3115-201ENST00000577915 68 ntBASIC-1.59□□□□□ -2.66
NUDCD3Q8IVD9 U7.3-201ENST00000616123 62 ntBASIC-1.59□□□□□ -2.66
NUDCD3Q8IVD9 MIR409-201ENST00000362237 79 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms