Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 RNU6-732P-201ENST00000516033 103 ntBASIC-1.17□□□□□ -2.6
HOXC5Q00444 RNU6-426P-201ENST00000516464 97 ntBASIC-1.17□□□□□ -2.6
HOXC5Q00444 AP002795.1-201ENST00000534879 84 ntBASIC-1.17□□□□□ -2.6
HOXC5Q00444 MIR3144-201ENST00000579460 79 ntBASIC-1.17□□□□□ -2.6
HOXC5Q00444 AC138207.3-201ENST00000585289 166 ntBASIC-1.17□□□□□ -2.6
HOXC5Q00444 SNORA63-201ENST00000363450 132 ntBASIC-1.18□□□□□ -2.6
HOXC5Q00444 RNU6-200P-201ENST00000364743 107 ntBASIC-1.18□□□□□ -2.6
HOXC5Q00444 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.18□□□□□ -2.6
HOXC5Q00444 RNU6-80P-201ENST00000384195 107 ntBASIC-1.18□□□□□ -2.6
HOXC5Q00444 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.18□□□□□ -2.6
HOXC5Q00444 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.18□□□□□ -2.6
HOXC5Q00444 RNU6-246P-201ENST00000384702 107 ntBASIC-1.18□□□□□ -2.6
HOXC5Q00444 MIR889-201ENST00000401280 79 ntBASIC-1.18□□□□□ -2.6
HOXC5Q00444 MTND4LP9-201ENST00000427694 174 ntBASIC-1.18□□□□□ -2.6
HOXC5Q00444 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.18□□□□□ -2.6
HOXC5Q00444 MIR4796-201ENST00000580742 81 ntBASIC-1.18□□□□□ -2.6
HOXC5Q00444 AC091912.2-201ENST00000624798 167 ntBASIC-1.18□□□□□ -2.6
HOXC5Q00444 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.19□□□□□ -2.6
HOXC5Q00444 RNU6-774P-201ENST00000363238 107 ntBASIC-1.19□□□□□ -2.6
HOXC5Q00444 SNORD58A-201ENST00000383875 65 ntBASIC-1.19□□□□□ -2.6
HOXC5Q00444 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.19□□□□□ -2.6
HOXC5Q00444 RNU6-30P-201ENST00000384561 107 ntBASIC-1.19□□□□□ -2.6
HOXC5Q00444 MIR507-201ENST00000385234 94 ntBASIC-1.19□□□□□ -2.6
HOXC5Q00444 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.19□□□□□ -2.6
HOXC5Q00444 SNORA19.1-201ENST00000410656 129 ntBASIC-1.19□□□□□ -2.6
HOXC5Q00444 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.19□□□□□ -2.6
HOXC5Q00444 snoU13.19-201ENST00000459148 104 ntBASIC-1.19□□□□□ -2.6
HOXC5Q00444 MIR3115-201ENST00000577915 68 ntBASIC-1.19□□□□□ -2.6
HOXC5Q00444 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.2□□□□□ -2.6
HOXC5Q00444 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.2□□□□□ -2.6
HOXC5Q00444 RNA5SP192-201ENST00000364404 120 ntBASIC-1.2□□□□□ -2.6
HOXC5Q00444 RNU6-574P-201ENST00000384265 107 ntBASIC-1.2□□□□□ -2.6
HOXC5Q00444 SNORD19-201ENST00000391191 68 ntBASIC-1.2□□□□□ -2.6
HOXC5Q00444 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.2□□□□□ -2.6
HOXC5Q00444 MTND5P41-201ENST00000517498 206 ntBASIC-1.2□□□□□ -2.6
HOXC5Q00444 AC004792.1-201ENST00000614523 137 ntBASIC-1.2□□□□□ -2.6
HOXC5Q00444 MIR6086-201ENST00000638065 55 ntBASIC-1.2□□□□□ -2.6
HOXC5Q00444 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.21□□□□□ -2.6
HOXC5Q00444 RNU7-107P-201ENST00000459121 61 ntBASIC-1.21□□□□□ -2.6
HOXC5Q00444 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.21□□□□□ -2.6
HOXC5Q00444 RNA5SP395-201ENST00000516567 118 ntBASIC-1.21□□□□□ -2.6
HOXC5Q00444 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.21□□□□□ -2.6
HOXC5Q00444 U7.5-201ENST00000517224 61 ntBASIC-1.21□□□□□ -2.6
HOXC5Q00444 AP001094.1-201ENST00000579805 193 ntBASIC-1.21□□□□□ -2.6
HOXC5Q00444 RNU6-164P-201ENST00000364604 103 ntBASIC-1.22□□□□□ -2.6
HOXC5Q00444 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.22□□□□□ -2.6
HOXC5Q00444 RNU6-887P-201ENST00000410660 100 ntBASIC-1.22□□□□□ -2.6
HOXC5Q00444 AL021921.1-201ENST00000442774 93 ntBASIC-1.22□□□□□ -2.6
HOXC5Q00444 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.22□□□□□ -2.6
HOXC5Q00444 RNU7-88P-201ENST00000458752 63 ntBASIC-1.22□□□□□ -2.6
HOXC5Q00444 SNORD33.1-201ENST00000516213 88 ntBASIC-1.22□□□□□ -2.6
HOXC5Q00444 RNU6-327P-201ENST00000516270 127 ntBASIC-1.22□□□□□ -2.6
HOXC5Q00444 RNU6-752P-201ENST00000516376 102 ntBASIC-1.22□□□□□ -2.6
HOXC5Q00444 MIR3165-201ENST00000579874 75 ntBASIC-1.22□□□□□ -2.6
HOXC5Q00444 MIR6874-201ENST00000635894 71 ntBASIC-1.22□□□□□ -2.6
HOXC5Q00444 MIR3914-2-201ENST00000637339 95 ntBASIC-1.22□□□□□ -2.6
HOXC5Q00444 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.23□□□□□ -2.61
HOXC5Q00444 RNU6-196P-201ENST00000384315 107 ntBASIC-1.23□□□□□ -2.61
HOXC5Q00444 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.23□□□□□ -2.61
HOXC5Q00444 RNU6-972P-201ENST00000391208 107 ntBASIC-1.23□□□□□ -2.61
HOXC5Q00444 RNA5SP67-201ENST00000516422 131 ntBASIC-1.23□□□□□ -2.61
HOXC5Q00444 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.23□□□□□ -2.61
HOXC5Q00444 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
HOXC5Q00444 MIR5683-201ENST00000636514 76 ntBASIC-1.23□□□□□ -2.61
HOXC5Q00444 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.24□□□□□ -2.61
HOXC5Q00444 RNU6-379P-201ENST00000363813 104 ntBASIC-1.24□□□□□ -2.61
HOXC5Q00444 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.24□□□□□ -2.61
HOXC5Q00444 RNU6-904P-201ENST00000516206 101 ntBASIC-1.24□□□□□ -2.61
HOXC5Q00444 RNU6-656P-201ENST00000516785 107 ntBASIC-1.24□□□□□ -2.61
HOXC5Q00444 MIR6502-201ENST00000617296 76 ntBASIC-1.24□□□□□ -2.61
HOXC5Q00444 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.25□□□□□ -2.61
HOXC5Q00444 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.25□□□□□ -2.61
HOXC5Q00444 RNU6-257P-201ENST00000410238 98 ntBASIC-1.25□□□□□ -2.61
HOXC5Q00444 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.25□□□□□ -2.61
HOXC5Q00444 SCARNA23-201ENST00000516060 130 ntBASIC-1.25□□□□□ -2.61
HOXC5Q00444 MIR4490-201ENST00000582647 84 ntBASIC-1.25□□□□□ -2.61
HOXC5Q00444 U2.7-201ENST00000619197 100 ntBASIC-1.25□□□□□ -2.61
HOXC5Q00444 SNORD116-10-201ENST00000363791 102 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 RNU6-340P-201ENST00000364005 107 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 RPL35AP4-201ENST00000412007 102 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 HLA-S-202ENST00000425174 53 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 AC090616.4-201ENST00000448026 115 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 RNU7-153P-201ENST00000516455 62 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 MIR5591-201ENST00000578248 65 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 MIR4520-1-201ENST00000582609 70 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.26□□□□□ -2.61
HOXC5Q00444 SNORA40-201ENST00000388090 126 ntBASIC-1.27□□□□□ -2.61
HOXC5Q00444 AL078595.1-201ENST00000404458 226 ntBASIC-1.27□□□□□ -2.61
HOXC5Q00444 MIR1236-201ENST00000408340 102 ntBASIC-1.27□□□□□ -2.61
HOXC5Q00444 AL035461.1-201ENST00000421490 332 ntBASIC-1.27□□□□□ -2.61
HOXC5Q00444 AL450471.1-201ENST00000447509 127 ntBASIC-1.28□□□□□ -2.61
HOXC5Q00444 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.28□□□□□ -2.61
HOXC5Q00444 RNU6-412P-201ENST00000516434 106 ntBASIC-1.28□□□□□ -2.61
HOXC5Q00444 RNU6-388P-201ENST00000517012 105 ntBASIC-1.28□□□□□ -2.61
HOXC5Q00444 RNU6-389P-201ENST00000517048 105 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms